6134 Journal of Medicinal Chemistry, 2008, Vol. 51, No. 19
Karellas et al.
tert-Butyl 6-(Benzyl(2-(4-(benzyloxy)-3-aminophenyl)hydroxy-
ethyl)amino)hexylcarbamate (8c). The title compound was prepared
using the same method that was described for 8a. Following flash
chromatography (eluent 5-10% MeOH/CH2Cl2 + 1% NH3), the
product was isolated as a yellow oil in 61% yield. 1H NMR (MeOD,
δ): 1.19-1.26 (m, 4H, 2 × CH2), 1.36-1.52 (m, 4H, 2 × CH2),
1.43 (s, 9H, 3 × CH3), 2.40-2.70 (m, 4H, 2 × CH2), 2.99 (t, 2H,
J ) 7.1, CH2), 3.58, 3.71 (d, 2H, J ) 13.5, CH2), 4.55 (dd, 1H, J
) 5.4, J ) 7.8, CH), 5.10 (s, 2H, CH2), 6.61 (dd, 1H, J ) 2.1, J
) 8.4, ArH), 6.76 (d, 1H, J ) 1.8, ArH), 6.83 (d, 1H, J ) 8.4,
ArH), 7.18-7.50 (m, 10H, ArH). 13C NMR (MeOD, δ): 27.7, 27.9,
28.0, 28.9, 30.9, 41.3, 55.1, 60.0, 63.3, 71.4, 72.0, 79.7, 113.1,
114.7, 117.5, 128.0, 128.5, 128.8, 129.3, 129.5, 130.2, 137.3, 137.7,
138.8, 140.5, 147.4, 158.4. LCMS (hydrophilic): Rf (min) ) 8.16,
(ESI + ve) found 548 [M + H]+ calcd for C33H46N3O4.
tert-Butyl 2-(Benzyl(2-(4-(benzyloxy)-3-formamidophenyl)hy-
droxyethyl)amino)ethylcarbamate (9a). Acetic anhydride (1.02 mL,
10.8 mol) was added to formic acid (406 µL, 10.8 mol) at 0 °C,
and the solution was stirred at 60 °C for 15 min. After cooling to
0 °C, a solution of 8a (240 mg, 0.49 mmol) in CH2Cl2 (15 mL)
was added, and the reaction was stirred at room temperature for
1 h under argon. The solvent was removed under reduced pressure,
and the residue was redissolved in methanol (15 mL). To the
solution was added 1 M NaOH (1.47 mL, 1.47 mmol), and the
mixture was left to stir for 30 min. The solvent was removed, and
the residue was redissolved in ethyl acetate, washed with water,
and dried over MgSO4 to yield the title compound (230 mg, 91%
yield) as a yellow oil. 1H NMR (MeOD, δ): 1.41 (s, 9H, 3 × CH3),
2.49-2.75 (m, 4H, 2 × CH2), 2.98-3.20 (m, 2H, CH2), 3.60, 3.70
(d, 2H, J ) 13.8, CH2), 4.57-4.67 (m, 1H, CH), 5.19 (s, 2H, CH2),
6.99-7.09 (m, 2H, ArH), 7.16-7.50 (m, 10H, ArH), 8.19 (s, 1H,
ArH), 8.32 (s, 1H, CHO). 13C NMR (MeOD, δ): 28.9, 39.4, 55.3,
60.4, 63.6, 71.8, 72.3, 79.9, 113.3, 120.8, 123.6, 127.8, 128.0, 128.8,
129.1, 129.3, 129.6, 130.3, 137.2, 138.1, 140.3, 148.7, 158.4, 162.0.
LCMS (hydrophilic): Rf (min) ) 8.14, (ESI + ve) found 520 [M
+ H]+ calcd for C30H38N3O5.
tert-Butyl 4-(Benzyl(2-(4-(benzyloxy)-3-formamidophenyl)hy-
droxyethyl)amino)butylcarbamate (9b). The title compound was
prepared using the same method that was described for 9a. The
product was obtained as a yellow oil in 92% yield. 1H NMR
(MeOD, δ): 1.35-1.55 (m, 4H, 2 × CH2), 1.42 (s, 9H, 3 × CH3),
2.52-2.64 (m, 2H, CH2), 2.68-2.77 (m, 2H, CH2), 2.96 (t, 2H, J
) 6.6, CH2), 3.71, 3.78 (d, 2H, J ) 13.5, CH2), 4.64 (t, 1H, J )
7.1, CH), 5.20 (s, 2H, CH2), 6.99-7.08 (m, 2H, ArH), 7.19-7.51
(m, 10H, ArH), 8.18 (s, 1H, ArH), 8.33 (s, 1H, CHO). 13C NMR
(MeOD, δ): 24.6, 28.5, 28.9, 41.0, 54.9, 59.7, 62.6, 71.3, 71.6,
79.7, 113.2, 120.6, 123.5, 127.8, 128.5, 128.7, 129.1, 129.4, 129.6,
130.5, 136.7, 138.0, 138.7, 148.6, 158.3, 161.9. LCMS (hydro-
philic): Rf (min) ) 8.54, (ESI + ve) found 548 [M + H]+ calcd
for C32H42N3O5.
tert-Butyl 6-(Benzyl(2-(4-(benzyloxy)-3-formamidophenyl)hy-
droxyethyl)amino)hexylcarbamate (9c). The title compound was
prepared using the same method that was described for 9a. The
product was obtained as a yellow oil in 89% yield. 1H NMR
(MeOD, δ): 1.14-1.25 (m, 4H, 2 × CH2), 1.35-1.49 (m, 4H, 2 ×
CH2), 1.42 (s, 9H, 3 × CH3), 2.42-2.53 (m, 2H, CH2), 2.62-2.71
(m, 2H, CH2), 2.97 (t, 2H, J ) 6.9, CH2), 3.61, 3.68 (d, 2H, J )
13.5, CH2), 4.61 (t, 1H, J ) 6.6, CH), 5.12 (s, 2H, CH2), 6.98-7.07
(m, 2H, ArH), 7.17-7.50 (m, 10H, ArH), 8.21 (s, 1H, ArH), 8.32
(s, 1H, CHO). 13C NMR (MeOD, δ): 27.7, 27.9, 28.0, 29.0, 31.0,
41.3, 55.3, 60.2, 63.2, 71.8, 71.9, 79.8, 113.3, 120.8, 123.7, 128.1,
128.9, 129.2, 129.4, 129.7, 130.3, 137.2, 138.1, 140.3, 148.7, 158.4,
162.0. LCMS (hydrophilic): Rf (min) ) 9.23, (ESI + ve) found
576 [M + H]+ calcd for C34H46N3O5.
concentrated in vacuo, and freeze-dried to produce the title
compound as a yellow gum (236 mg, 100%). H NMR (MeOD,
1
δ): 3.28-3.40 (m, 2H, CH2), 3.47-3.75 (m, 4H, 2 × CH2), 4.56
(s, 2H, CH2), 4.83 (t, 1H, J ) 6.9, CH), 5.20 (s, 2H, CH2),
6.97-7.12 (m, 2H, ArH), 7.25-7.67 (m, 10H, ArH), 8.19 (s, 1H,
ArH), 8.35 (s, 1H, CHO). 13C NMR (MeOD, δ): 35.6, 52.2, 60.4,
60.5, 69.3, 71.7, 113.7, 120.2, 123.5, 128.2, 128.8, 129.2, 129.6,
130.6, 130.7, 131.4, 132.5, 134.2, 137.9, 149.5, 162.2. LCMS
(hydrophilic): Rf (min) ) 6.27, (ESI + ve) found 420 [M + H]+
calcd for C25H30N3O3.
N-(5-(2-((4-aminobutyl)(benzyl)amino)-1-hydroxyethyl)-2-(ben-
zyloxy)phenyl)formamide: TFA salt (10b). The title compound was
prepared using the same method that was described for 10a. The
product was obtained as a brown gum in quantitative yield. 1H
NMR (MeOD, δ): 1.72 (m, 2H, CH2), 1.95 (m, 2H, CH2), 3.00 (t,
2H, J ) 7.2, CH2), 3.18-3.30 (m, 4H, 2 × CH2), 4.42-4.58 (m,
2H, CH2), 5.21 (s, 2H, CH2), 7.00-7.14 (m, 2H, ArH), 7.20-7.65
(m, 10H, ArH), 8.22 (s, 1H, ArH), 8.35 (s, 1H, CHO). 13C NMR
(MeOD, δ): 21.8, 25.7, 40.0, 59.1, 59.5, 59.7, 68.8, 71.7, 113.7,
120.2, 123.4, 128.4, 128.8, 129.2, 129.6, 130.5, 130.7, 131.4, 132.5,
134.4, 137.4, 149.4, 162.2. LCMS (hydrophilic): Rf (min) ) 9.23,
(ESI + ve) found 448 [M + H]+ calcd for C27H34N3O3.
N-(5-(2-((6-aminohexyl)(benzyl)amino)-1-hydroxyethyl)-2-(ben-
zyloxy)phenyl)formamide: TFA salt (10c). The title compound was
prepared using the same method that was described for 10a. The
product was obtained as a yellow oil in quantitative yield. 1H NMR
(MeOD, δ): 1.43 (m, 4H, 2 × CH2), 1.69 (m, 2H, CH2), 1.87 (m,
2H, CH2), 2.93 (t, 2H, J ) 7.2, CH2), 3.18-3.27 (m, 4H, 2 ×
CH2), 4.42-4.60 (m, 2H, CH2), 5.24 (s, 2H, CH2), 7.01-7.64 (m,
12H, ArH), 8.22 (s, 1H, ArH), 8.35 (s, 1H, CHO). 13C NMR
(MeOD, δ): 24.3, 26.8, 27.0, 28.2, 40.4, 59.1, 59.5, 59.6, 68.8,
71.8, 113.7, 120.2, 123.5, 128.2, 128.7, 129.2, 129.6, 130.4, 130.8,
131.2, 132.4, 134.5, 137.4, 149.3, 162.3. LCMS (hydrophilic): Rf
(min) ) 9.23, (ESI + ve) found 476 [M + H]+ calcd for
C29H38N3O3.
N-(5-(2-(benzyl(2-(N6-adenosinyl)ethyl)amino)-1-hydroxyethyl)-
2-(benzyloxy)phenyl)formamide (11a). To a suspension of 6-chlo-
ropurine riboside (381 mg, 1.33 mmol) in t-BuOH (20 mL) was
added 10a (236 mg, 0.44 mmol), followed by DIPEA (694 µL,
3.98 mmol), and the reaction mixture was stirred at 80 °C for 24 h
under N2. The solvent was evaporated under reduced pressure and
the residue was purified by flash silica chromatography (eluent 10%
MeOH/CH2Cl2 + 1% NH3) to produce the title compound as a
yellow oil (134 mg, 45% yield). 1H NMR (MeOD, δ): 2.60-2.85
(m, 4H, 2 × CH2), 3.45-3.95 (m, 6H, 3 × CH2), 4.16-4.21 (m,
1H, CH), 4.31-4.36 (m, 1H, CH), 4.67 (t, 1H, J ) 6.0, CH),
4.73-4.79 (m, 1H, CH), 5.10 (d, 2H, J ) 1.8, CH), 5.96 (d, 1H,
J ) 6.3, CH), 6.60-7.45 (m, 12H, ArH), 8.10 (m, 1H, ArH),
8.19-8.26 (m, 2H, 2 × CH-purine), 8.29 (s, 1H, CHO). 13C NMR
(MeOD, δ): 39.7, 54.5, 60.7, 63.6, 63.8, 71.7, 72.6, 72.8, 75.5,
88.3, 91.4, 114.9, 120.7, 121.7, 123.8, 127.9, 128.0, 128.6, 128.8,
129.1, 129.6, 130.2, 137.1, 138.2, 140.1, 141.4, 148.8, 150.2, 153.3,
156.2, 162.0. LCMS (hydrophilic): Rf (min) ) 6.54, (ESI + ve)
found 670 [M + H]+ calcd for C35H40N7O7.
N-(5-(2-(benzyl(4-(N6-adenosinyl)butyl)amino)-1-hydroxyethyl)-
2-(benzyloxy)phenyl)formamide (11b). The title compound was
prepared using the same method that was described for 11a. After
purification by flash chromatography (eluent 5-10% MeOH/CH2Cl2
+ 1% NH3), the product was obtained as a yellow oil in 38% yield.
1H NMR (MeOD, δ): 1.50-1.63 (m, 4H, 2 × CH2), 2.48-2.65
(m, 4H, 2 × CH2), 3.40-3.55 (m, 2H, CH2), 3.60-3.94 (m, 4H, 2
× CH2), 4.15-4.19 (m, 1H, CH), 4.32 (dd, 1H, J ) 2.4, J ) 5.1,
CH), 4.59-4.65 (m, 1H, CH), 4.74 (t, 1H, J ) 5.4, CH), 5.15 (s,
2H, CH), 5.94 (d, 1H, J ) 6.6, CH), 6.96-7.49 (m, 12H, ArH),
8.18 (m, 2H, ArH and CH-purine), 8.22 (s, 1H, CH-purine), 8.31
(s, 1H, CHO). 13C NMR (MeOD, δ): 25.4, 28.1, 41.4, 55.0, 60.2,
63.3, 63.5, 71.8, 72.1, 72.7, 75.5, 88.2, 91.3, 113.2, 120.9, 121.4,
123.7, 127.8, 128.1, 128.8, 129.1, 129.2, 129.6, 130.3, 137.3, 138.1,
140.2, 141.4, 148.7, 150.3, 153.5, 156.2, 162.0. LCMS (hydro-
philic): Rf (min) ) 6.62, (ESI + ve) found 698 [M + H]+ calcd
for C37H44N7O7.
N-(5-(2-((2-aminoethyl)(benzyl)amino)-1-hydroxyethyl)-2-(ben-
zyloxy)phenyl)formamide: TFA salt (10a). A solution of trifluo-
roacetic acid/dichloromethane (1:1) (682 µL) was added dropwise
to a stirred suspension of 9a (230 mg, 0.44 mmol) in dichlo-
romethane (3 mL), and the mixture was stirred at room temperature
for 4 h under argon. After the evaporation of the solvent and excess
TFA, the residue was then redissolved in MeOH (40 mL),