Piperazino-Substituted 1,4-Benzodiazepin-2-ones
lators of PPIs are highly desirable tools for both the study of
physiological cellular processes and the treatment of a number
of diseased states in which aberrant or inappropriate PPIs occur.
A molecular recognition event depends upon electrostatic and
steric complementarities at the ligand/receptor interface. For
small molecules this recognition surface is dictated by the
geometry of appended functional groups on a suitable scaffold,
matching protein surface features where shape and electrostatic
potential, hydrophobic patches,3b,5-8 and about 76% of all
hydrogen bonds in protein complexes5,9 are mainly associated
with side chains as key recognition elements in PPIs.10
ꢀ-Turns are often conserved during evolution, they represent
an important recognition element of peptides and proteins, and
are considered as initiation sites for protein folding. Conse-
quently, a great deal of scientific effort has been devoted to
classifying, designing, and synthesizing ꢀ-turn mimetics.11 Three
classes of peptidomimetics were defined:12 (i) class I mimetics
that often match the amide bond backbone, (ii) class II mimetics
that do not necessarily mimic the structure of the parent peptide,
and (iii) class III compounds based on replacing the amide
backbone of peptides by other templates or scaffolds. The
benzodiazepine (BDZ) scaffold represents a classic example of
class III peptidomimetics and is considered a protypical
privileged substructure.13 The term “privileged structure” was
first applied by Evans et al. to 1,4-benzodiazepine-2-ones able
to bind cholecystokinin, gastrin, and central BDZ receptor.14,15
There is a plethora of literature indicating the “pharmacoge-
nicity” of the BDZ scaffold and its therapeutic utility. Besides
the well-known anxiolytic,16 sedative,17 and anticonvulsant18
activities of the classic BDZs (e.g., diazepam, triazolam, or
midazolam), several 1,4-benzodiazepine derivatives demon-
strated activity as antitumor antibiotics,19 anti-HIV agents,20 and
antiarrhythmics.21 Furthermore, diverse 1,4-benzodiazepine
derivatives were also used as constrained dipeptide mimics or
nonpeptide scaffolds in the search for peptidomimetics either
as enzyme inhibitors22 or as ligands of G-protein coupled
receptors.23 More recently, the 1,4-benzodiazepine-2,5-dione
scaffold was also used as a PPI modulator.24
Given the importance of PPIs, the utility of peptidomimetics,
and the pharmacogenic profile of 1,4-benzodiazepin-2-ones, we
decided to further explore this scaffold with the aim of
identifying new molecular entities that match PPI motifs. In
particular, we focused our attention on fuctionalizing the BDZ
C8 and C9 positions with a piperazine ring. The distal piperazine
nitrogen atom represents an interaction point that in combination
with the BDZ scaffold could allow the reproduction of protein
secondary structures and/or hot-spots (PPI domains). In fact,
the piperazine ring is a common pharmacophore found in a large
number of drugs, it is regarded as a privileged structural element
for the enhancement of “drug-like” properties, and has been
used in the construction of peptidomimetic compounds and PPI
inhibitors.24c,25
Most of the BDZs described to date present either an
unsubstituted or C6/C7-substituted benzofused ring system due,
in part, to the facile incorporation of functionality at these
positions. On the contrary, examples of C8/C9-substituted 1,4-
benzodiazepines are scarce and an even smaller subset of these
examples bear groups that can be functionalized to generate
chemical diversity13 (e.g., amine, carboxylic functions, etc.),
although few examples are reported of chemical routes leading
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Leftheris, K.; Miller, A.; Mitt, T.; Patel, M.; Penhallow, B. A.; Ricca, C.; Rose,
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