Y.-M. Zhang et al. / Bioorg. Med. Chem. 16 (2008) 9212–9216
9215
5.1.4. (2R)-4-(6-Aminopurine-9-yl)-2-hydroxybutyric acid
methyl ester [(R)-DZ2002]
5. Experimental
In the same manner, (R)-DZ2002 was obtained as a white solid:
1H NMR (DMSO-d6): d 8.14 (1H, s), 8.07 (1H, s), 7.18 (2H, br s), 5.71
(1H, br d, J = 5.7 Hz), 4.24 (2H, t, J = 6.9 Hz), 4.01 (1H, m), 3.56 (3H,
5.1. General procedure
1H (300 MHz) and 13C (75 MHz) NMR spectra were performed
on a Varian Mercury-VX300 spectrometer, using residue CHCl3,
DMSO or H2O as internal standard. HRMS (ESI) were recorded on
a waters-micromass Q-TOF Ultima Global electrospray mass spec-
trometer. Melting point was measured on a ShengGuang WRR
Melting Points apparatus and was not corrected. Optical rotation
data was recorded on a Perkin-Elmer Model 341 Polarimeter. ee
values were determined by HPLC: Chiralcel OJ-H column; n-hex-
ane/2-propanol (90:10); 1.0 mL/min; 263 nm; tR (R) 69.2 min; tR
(S) 98.1 min.
s), 2.21 (1H, m), 2.06 (1H, m); HR ESIMS m/z 252.1100 [M+H]+
25
(calcd. for C10H14N5O3 252.1097); [
= 1:1, v/v); ee 94%.
a
]
D
ꢀ17.9 (c 0.3, MeOH/H2O
5.1.5. 3-(6-Aminopurine-9-yl)-propionic acid methyl ester (5)
To a mixture of adenine (5.0 g, 37.0 mmol) in absolute ethanol
(130 mL) and dry benzene (16 mL) was added sodium metal
(60 mg, 1.6 mmol) carefully at room temperature. Upon the disap-
pearance of sodium, ethyl acrylate was added dropwise. The result-
ing mixture was heated to reflux for 12 h, and then cooled to room
temperature. The solvent was removed under reduced pressure.
The obtained residue was titrated with cold ethanol. The precipi-
tate was collected by filtration, washed with cold ethanol and dried
in vacuum. Compound 5 was obtained (7.2 g, 83%) as an off-white
solid: 1H NMR (CDCl3) d 8.36 (1H, s), 7.90 (1H, s), 5.71 (2H, br s),
4.50 (2H, t, J = 6.3 Hz), 4.13 (2H, q, J = 7.2 Hz), 2.92 (2H, t,
J = 6.3 Hz), 1.22 (2H, t, J = 7.2 Hz).
5.1.1. (4S)-Toluene-4-sulfonic acid 2-(2,2-dimethyl-5-oxo-
[1,3]dioxolan-4-yl)-ethyl ester (3)
To a solution of compound 2 (60.0 g, 375 mmol), prepared from
(S)-malic acid,12 in pyridine (300 mL), was added p-toluenesulfonyl
chloride (71.5 g, 375 mmol) at 0 °C. The mixture was stirred at that
temperature for 1 h and then at room temperature for 4 h. The sol-
vent was removed under reduced pressure and the residue was
dissolved in ethyl acetate (600 mL). The organic solution was
washed with HCl solution (5%), satd NaHCO3 solution, and brine,
dried on MgSO4 and concentrated. Crude product was purified by
silica-gel chromatograph eluting with petroleum ether/ethyl ace-
tate (5:1). Compound 3 was obtained (67%) as a colorless oil: 1H
NMR (CDCl3) d 7.80 (2H, d, J = 8.1 Hz), 7.35 (2H, d, J = 8.4 Hz),
4.43 (1H, dd, J = 4.5 and 7.8 Hz), 4.23 (2H, m), 2.45 (3H, s), 2.22
(1H, m), 2.02 (1H, m), 1.57 (3H, s), 1.51 (3H, s).
5.1.6. 3-(6-Aminopurine-9-yl)-propionic acid (6)
A mixture of compound 5 (4 g, 17 mmol) and aqueous 3 N HCl
solution was heated to reflux for 3 h and was cooled to room tem-
perature. The mixture pH was adjusted to 3 by careful addition of
solid NaOH. The precipitate was collected by filtration, washed
with cold water and dried in vacuum. Compound 6 was obtained
(3.35 g, 95%) as a white solid: 1H NMR (D2O) d 8.42 (1H, s), 8.37
(1H, s), 4.58 (2H, t, J = 6.3 Hz), 3.02 (2H, t, J = 6.3 Hz).
5.1.2. (5S)-5-[2-(6-Aminopurine-9-yl)-ethyl]-2,2-dimethyl-
[1,3]dioxolan-4-one (4)
5.1.7. 5-(6-Aminopurine-9-yl)-3-oxo-2-(triphenyl-k5-
A mixture of compound 3 (72.0 g, 229 mmol), adenine (62.0 g,
459 mmol), K2CO3 (92.0 g, 665 mmol) and 18-crown-6 (2.0 g,
7.6 mmol) in dry DMF (360 mL) was heated to 50 °C for 12 h. The
mixture was cooled to room temperature and filtered. The solid
was washed with ethyl acetate. The combined organic solution
was concentrated to remove most of DMF to afford a brown oil.
The crude product was purified by silica-gel chromatograph elut-
ing with chloroform/methanol (20:1, then 10:1). Compound 4
was obtained (20.0 g, 32%) as a pale yellow solid: 1H NMR
(DMSO-d6) d 8.14 (2H, s), 7.19 (2H, br s), 4.67 (1H, dd, J = 4.2 and
7.8 Hz), 4.27 (2H, t, J = 7.2 Hz), 2.40 (1H, m), 2.23 (1H, m), 1.56
(3H, s), 1.52 (3H, s).
phosphanylidene)-pentanenitrile (7)
A mixture of compound 6 (1.3 g, 6 mmol), (triphenylphosphor-
anylidene)acetonitrile (3.8 g, 13 mmol),14 EDCI (1.3 g, 7 mmol) and
DMAP (77 mg, 0.6 mmol) in dry DMF (35 mL) was allowed to stir at
room temperature for 12 h. The mixture was diluted with water
(35 mL) and extracted with ethyl acetate (3ꢂ 40 mL). The com-
bined organic phase was washed with water and brine, dried on
MgSO4, and concentrated to afford the title product. Compound 7
was obtained (2.2 g, 71%) as a pale yellow powder: 1H NMR (CDCl3)
d 8.38 (1H, s), 7.75 (1H, s), 7.65 (4H, m), 7.49 (11H, m), 5.54 (2H, br
s), 4.53 (2H, t, J = 6.0 Hz), 3.32 (2H, t, J = 6.0 Hz).
5.1.8. 3-(6-Aminopurine-9-yl)-2-oxo-propionic acid methyl
ester [(Keto)-DZ2002]
5.1.3. (2S)-4-(6-Aminopurine-9-yl)-2-hydroxybutyric acid
methyl ester [(S)-DZ2002]
Ozone was bubbled into a mixture of compound 7 (300 mg,
0.6 mmol) in dichloromethane (20 mL) and methanol (20 mL) at
ꢀ78 °C until the color turned pale blue and then for additional
10 min. N2 was then bubbled through to remove excess ozone. Sil-
ica-gel (1.2 g) was added to the mixture and was then concentrated
until a free-running solid was obtained. The solid was transferred
to a silica-gel column and eluted with chloroform/methanol
(15:1). After removal of solvents, (Keto)-DZ2002 was obtained
(134 mg, 88%) as a white solid: 1H NMR (CDCl3): d 8.34 (1H, s),
7.90 (1H, s), 5.58 (2H, br s), 4.54 (2H, t, J = 6.0 Hz), 3.86 (3H, s),
3.53 (2H, t, J = 6.0 Hz); 13C NMR (DMSO-d6): d 190.90, 160.07,
155.88, 152.24, 149.43, 140.95, 118.70, 52.54, 38.27, 37.64; HR
ESIMS m/z 272.0758 [M+Na]+ (calcd. for C10H11N5NaO3 272.0760).
Acetyl chloride (7.0 mL, 98 mmol) was added dropwise to a
solution of compound 4 (18.0 g, 65 mmol) in methanol (540 mL)
at 0 °C within 30 min. The mixture was then allowed to stir at
room temperature for 3 h. NaHCO3 (14 g, 167 mmol) was added
carefully to neutralize the generated acid. The mixture was filtered.
To the filtrate was added silica-gel (60 g) and concentrated under
reduced pressure until a freely running solid was obtained. This so-
lid was transferred to a silica-gel column and eluted with chloro-
form/methanol (15:1, then 10:1). The obtained crude product
was further purified by recrystallization in methanol. (S)-DZ2002
was obtained (8.1 g, 50%) as white crystalline powders: 1H NMR
(DMSO-d6): d 8.13 (1H, s), 8.07 (1H, s), 7.18 (2H, br s), 5.69 (1H,
br d, J = 5.7 Hz), 4.24 (2H, t, J = 6.9 Hz), 4.01 (1H, m), 3.56 (3H, s),
2.23 (1H, m), 2.06 (1H, m); 13C NMR (DMSO-d6): d 174.53,
156.63, 153.06, 150.18, 141.67, 119.49, 67.97, 52.22, 40.34,
5.1.9. (2Rac)-4-(6-Aminopurine-9-yl)-2-hydroxybutyric acid
methyl ester [(Rac)-DZ2002]
A mixture of (Keto)-DZ2002 (38 mg, 0.15 mmol) in methanol
(20 mL) was added NaBH4 (7 mg, 0.18 mmol). The mixture was
stirred for 30 min at room temperature. Silica-gel (120 mg) was
34.21; HR ESIMS m/z 274.0921 [M+Na]+ (calcd. for C10H13N5NaO3
25
274.0916); mp 162–164 °C; [
a
]
D
+19.2 (c 0.3, MeOH/H2O = 1:1);
ee 92%.