858
M. Pallavicini et al. / Bioorg. Med. Chem. Lett. 19 (2009) 854–859
d 1.34–1.39 (m, 1H), 1.62–1.77 (m, 3H), 2.17–2.33 (m, 2H), 2.35 (s, 3H), 2.48 (d,
J = 6 Hz, 2H), 2.97–3.03 (m, 1H), 3.56–3.63 (m, 1H), 3.50 and 3.76 (2 d,
J = 13.5 Hz, 4H), 7.21–7.32 (m, 10H).
that N-demethylation of nicotinoids can enhance binding affinity,
especially when the ligand molecule is relatively rigid and the con-
figuration preferentially assumed by the chiral tertiary N-methyl
ammonium leads to an unfavourable disposition of the nitrogen-
bound proton and methyl.58 Here, we observe the opposite trend:
the N-demethylation of 2 reduces the binding affinity, as in the
case of nicotine. We impute the reduced affinity of 2a to a repulsive
interaction of one of its two nitrogen protons with a binding site
amino acidic residue. Interestingly, the same unfavourable interac-
tion is shown by the unique nitrogen proton of 2 stereoisomers,
when their chiral nitrogen assumes R configuration, and it is signif-
icant that 2a and 2 with N+ in R configuration have similar docking
scores, worse than 2 with N+ in S configuration (see Table 2). This
would further address the key role, often neglected, of the proton-
ation-induced chirality, whose implication in the interaction with
the binding site transcends the mere stereoelectronic effects of
N-methyl group.
20. (2S,20S)-8: Isolated as an oil by concentration of the reaction solution in
methanol after removal of the catalyst; 1H NMR (CDCl3) d 1.53–1.56 (m, 1H),
1.70–1.77 (m, 2H), 1.85–1.94 (m, 1H), 2.31–2.42 (m, 2H), 2.43 (s, 3H), 2.58 (dd,
J = 12.7, 8.3 Hz, 1H), 2.77 (dd, J = 12.7, 3.3 Hz, 1H), 3.01–3.07 (m, 1H), 3.20–3.26
(m, 1H).
21. (2R,20S)-8: Isolated as an oil by concentration of the reaction solution in
methanol after removal of the catalyst; 1H NMR spectrum as described in Ref. 11.
22. (5S,20S)-1: Isolated as a solid by chromatography on silica gel (eluent 8:2
toluene/methanol); mp 128–129 °C (dec); ½a D25
ꢂ
ꢀ7.0 (c1, methanol); 1H NMR
(CDCl3) d 1.49–1.60 (m, 1H), 1.72–1.98 (m, 3H), 2.30 (pseudo q, J = 8.7 Hz, 1H),
2.45 (s, 3H), 2.63 (pseudo q, J = 8.7 Hz, 1H), 3.05–3.11 (m, 1H), 3.33 (pseudo t,
J = 8.5 Hz, 1H), 3.57 (pseudo t, J = 8.5 Hz, 1H), 4.65 (pseudo q, J = 7.7 Hz, 1H),
5.40 (br s, 1H).
23. (5R,20S)-1: Isolated as a solid by chromatography on silica gel (eluent 8:2
toluene/methanol); mp 173–174 °C;
½
a 2D5
ꢂ
ꢀ96.0 (c1, methanol); 1H NMR
spectrum as described in Ref. 11.
24. (R)-3: Mp and 1H NMR identical to the enantiomer.
25. (R)-4: ½a 2D5
ꢂ
+66.4 (c1, acetone); 1H NMR identical to the enantiomer.
+46.1 (c1, MeOH); ee 98.8% (by HPLC on a Kromasil Amycoat
26. (R)-5: ½a 2D5
ꢂ
column; 9:1 hexane/isopropanol, 1.5 ml/min at 254 nm; tR 3.90 min); mp and
1H NMR identical to the enantiomer.
27. (2R,20R)-6:
½
a 2D5
ꢂ
+77.7 (c1, MeOH); mp and 1H NMR identical to the
Acknowledgements
enantiomer.
28. (2S,20R)-6: ½a 2D5
ꢂ
+32.8 (c1, MeOH); mp and 1H NMR identical to the enantiomer.
+74.4 (c1, MeOH); 1H NMR identical to the enantiomer.
+35.4 (c1, MeOH); 1H NMR identical to the enantiomer.
This research was financially supported by funds of the Italian
Ministry of University and Scientific Research (FIRB Grant
RBNE03FH5Y 002).
29. (2R,20R)-7: ½a 2D5
ꢂ
30. (2S,20R)-7: ½a 2D5
ꢂ
31. (2R,20R)-8: 1H NMR identical to the enantiomer.
32. (2S,20R)-8: 1H NMR identical to the enantiomer.
33. (5R,20R)-1: ½a 2D5
ꢂ
+6.9 (c1, MeOH); mp and 1H NMR identical to the enantiomer.
+94.9 (c1, MeOH); mp and 1H NMR identical to the enantiomer.
34. (5S,20R)-1: ½a 2D5
ꢂ
References and notes
35. (S)-9: Isolated as an oil by chromatography on silica gel (eluent 7:3
cyclohexane/ethyl acetate); ½a D25
ꢀ91.8 (c1, MeOH); ee 98.2% (by HPLC on a
ꢂ
1. Cassels, B. K.; Bermúdez, I.; Dajas, F.; Abin-Carriquiry, J. A.; Wonnacott, S. DDT
2005, 10, 1657.
2. Arneric, S. P.; Holladay, M.; Williams, M. Biochem. Pharmacol. 2007, 74, 1092.
3. Jensen, A. A.; Frølund, B.; Liljefors, T.; Krogsgaard-Larsen, P. J. Med. Chem. 2005,
48, 4705.
4. Tønder, J. E.; Olesen, P. H. Curr. Med. Chem. 2001, 8, 651.
5. Nicolotti, O.; Pellegrini-Calace, M.; Altomare, C.; Carotti, A.; Carrieri, A.; Sanz, F.
Curr. Med. Chem. 2002, 9, 1.
6. Mazurov, A.; Hauser, T.; Miller, C. H. Curr. Med. Chem. 2006, 13, 1567.
7. Pedretti, A.; Marconi, C.; Bolchi, C.; Fumagalli, L.; Ferrara, R.; Pallavicini, M.;
Valoti, E.; Vistoli, G. Biochem. Biophys. Res. Commun. 2008, 369, 648.
8. Bisson, W. H.; Scapozza, L.; Westera, G.; Mu, L.; Schubiger, P. A. J. Med. Chem.
2005, 48, 5123.
Chiralcel OJ column; 9:1 hexane/isopropanol, 0.6 ml/min at 276 nm; tR
13.90 min); 1H NMR (CDCl3) d 1.48 and 1.51 (2s, 9H), 1.61–2.21 (m, 4H),
3.34–3.59 (m, 2H), 3.94 (d, J = 11.0 Hz, 1H), 4.09–4.14 (m, 1.5H), 4.27–4.30 (m,
0.5H), 6.83–6.94 (m, 4H).
36. (1R,20S)-10: Isolated as a white solid by chromatography on silica gel (eluent
7:3 toluene/ethyl acetate) and crystallization from diethyl ether; mp 105–
106 °C; ½a 2D5
ꢂ
ꢀ47.8 (c1, chloroform); de 99.0% (by HPLC on a LiChroCART
LiChrospher Si 60 column, 5
lm; 65:35 hexane/ethyl acetate, 2 ml/min at
276 nm; tR 4.74 min); ee 98.8% (by HPLC on a Chiralcel OD-H column; 9:1
hexane/isopropanol, 0.5 ml/min at 276 nm; tR 12.23 min); 1H NMR (CDCl3) d
1.48 (s, 9H), 1.50–2.10 (m, 4H), 3.26–3.34 (m, 1H), 3.48–3.58 (m, 1H), 3.81 (br
s, 1H), 3.98 (dd, J = 10.5, 5.2 Hz, 1H), 4.05–4.12 (m, 2H), 6.74–6.80 (m, 1H),
6.90–6.96 (m, 3H).
9. Bisson, W. H.; Westera, G.; Schubiger, P. A.; Scapozza, L. J. Mol. Model. 2008, 14,
891.
10. Grazioso, G.; Cavalli, A.; De Amici, M.; Recanatini, M.; De Micheli, C. J. Comput.
Chem. 2008, 29, 2593.
37. (1S,20S)-10: Isolated as an oil by chromatography on silica gel (eluent 7:3
toluene/ethyl acetate); ½a D25
ꢂ
ꢀ14.2 (c1, chloroform); de 99.4% (by HPLC on a
LiChroCART LiChrospher Si 60 column, 5
l
m; 65:35 hexane/ethyl acetate, 2 ml/
11. Pallavicini, M.; Moroni, B.; Bolchi, C.; Cilia, A.; Clementi, F.; Fumagalli, L.; Gotti,
C.; Meneghetti, F.; Riganti, L.; Vistoli, G.; Valoti, E. Bioorg. Med. Chem. Lett. 2006,
16, 5610.
min at 276 nm; tR 5.95 min); ee 97.9% (by HPLC on a Chiralcel OD-H column;
9:1 hexane/isopropanol, 0.5 ml/min at 276 nm; tR 12.42 min); 1H NMR (CDCl3)
d 1.46 (s, 9H), 1.79–2.05 (m, 4H), 3.23–3.31 (m, 1H), 3.46–3.54 (m, 1H), 3.86–
3.92 (m, 1H), 4.04–4.10 (m, 3H), 6.77–6.82 (m, 1H), 6.89–6.96 (m, 3H).
12. Schmitt, J. D. Curr. Med. Chem. 2000, 7, 749.
38. (2R,20S)-11: Isolated as a viscous oil by chromatography on silica gel (eluent
13. (S)-3: Isolated as a yellow solid after chromatographic separation on silica gel
(eluent 7:3 cyclohexane/ethyl acetate); mp 45–46 °C; IR 2104 cmꢀ1
;
1H NMR
95:5 toluene/ethyl acetate); ½a D25
ꢂ
ꢀ45.1 (c1, chloroform); 1H NMR (CDCl3) d
(CDCl3) d 1.42, 1.43 and 1.46 (3s, 9H), 1.85–2.19 (m, 4 H), 3.42–3.50 (m, 2H),
4.19 and 4.28 (2br s, 1H), 5.38 and 5.47 (2br s, 1H).
1.45 (s, 9H), 1.89–2.06 (m, 4H), 3.32–3.55 (m, 2H), 3.92–3.95 (m, 1H), 4.22–
4.37 (m, 3H), 6.80–6.88 (m, 4H).
39. (2S,20S)-11: Isolated as a viscous oil by chromatography on silica gel (eluent
14. (S)-4: Isolated as a pale yellow oil by chromatography on silica gel (eluent 7:3
cyclohexane/ethyl acetate); ½a D25
ꢂ
ꢀ67.0 (c1, acetone); 1H NMR (CDCl3) d 1.41
95:5 toluene/ethyl acetate); ½a D25
ꢂ
ꢀ152.0 (c1, chloroform); 1H NMR (CDCl3) d
and 1.44 (2s, 9H), 1.87–2.03 (m, 3H), 2.12–2.29 (m, 1H), 3.41–3.56 (m, 2H),
4.02–4.17 (m, 2H), 4.45–4.55 (m, 1H).
1.47 (s, 9H), 1.91–2.06 (m, 3H), 2.16–2.22 (br s, 1H), 3.39–3.49 (m, 2H), 3.93–
4.10 (m, 3H), 4.29–4.33 (dd, J = 11.3, 1.9 Hz, 1H), 6.81–6.89 (m, 4H).
40. (2R,20S)-2: Isolated as an oil by concentration of the reaction mixture after
adding dichloromethane, washing with water and filtering through celite; 1H
NMR spectrum as described in Ref. 11. (2R,20S)-2 Hydrochloride: Mp and 1H
15. (S)-5: Isolated as a white solid after chromatographic separation on silica gel
(eluent 7:3 cyclohexane/ethyl acetate) and crystallization from hexane; mp
89–90 °C;
½
a 2D5
ꢂ
ꢀ44.6 (c1, methanol); ee 99.8% (by HPLC on
a Kromasil
NMR spectrum as described in Ref. 11; ½a D25
ꢂ
+33.3 (c2, EtOH).
AmyCoat column; 9:1 hexane/isopropanol, 1.5 ml/min at 254 nm; tR 6.35 min);
1H NMR (DMSO-d6, 100 °C) d 1.24 (s, 9H), 1.51–1.77 (m, 3H), 1.98–2.07 (m, 1H),
3.23–3.33 (m, 2H), 3.37 (s, 2H), 3.61–3.74 (2d, 4H), 4.27–4.32 (dd, 1H), 7.20–
7.36 (m, 10H).
41. (2S,20S)-2: Isolated as an oil by concentration of the reaction mixture after
adding dichloromethane, washing with water and filtering through celite; 1H
NMR (CDCl3) d 1.43–1.94 (m, 4H), 2.22–2.30 (m, 1H), 2.43 (s, 3H), 2.47–2.53
(m, 1H), 3.10–3.15 (m, 1H), 4.00 (dd, J = 11.0, 8.3 Hz, 1H), 4.10 (ddd, J = 8.3, 4.4,
1.9 Hz, 1H), 4.28 (dd, J = 11.0, 1.9 Hz, 1H), 6.79–6.96 (m, 4H). (2S,20S)-2
16. (2S,20S)-6: Isolated as a white solid by crystallization from diisopropyl ether
and furthermore from the crystallization mother liquors by chromatography
on silica gel (eluent 7:3 cyclohexane/ethyl acetate); mp 101–102 °C; ½a D25
ꢂ
Hydrochloride: Mp 144–145 °C; ½a D25
ꢂ
ꢀ107.5 (c2, EtOH); 1H NMR (DMSO-d6) d
ꢀ78.5 (c1, methanol); 1H NMR (DMSO-d6, 100 °C) d 1.37 (s, 9H), 1.57–1.77 (m,
4H), 2.39–2.53 (m, 2H), 3.00–3.05 (m, 1H), 3.29–3.36 (m, 1H), 3.57–3.70 (m,
4H), 3.76–3.79 (m, 1H), 3.95–3.98 (m, 1H), 4.17 (br s, 1H), 7.17–7.34 (m, 10H).
17. (2R,20S)-6: Isolated as a white solid by chromatography on silica gel (eluent 7:3
1.87–2.10 (m, 4H), 3.11–3.14 (m, 1H), 2.89 and 2.90 (2s, 3H), 3.50–3.60 (m,
1H), 3.70–3.80 (m, 1H), 3.94 (dd J = 11.6, 8.5 Hz, 1H), 4.42 (dd, J = 11.6, 2.2 Hz,
1H), 4.70–4.73 (m, 1H), 6.85–6.95 (m, 4H), 9.95 (br s, 1H).
42. (2R,20S)-2a: Isolated as a colourless oil by diethyl ether/aq KOH extraction from
the reaction mixture and concentration of the organic phase; 1H NMR (CDCl3) d
1.53–1.65 (m, 1H), 1.73–1.97 (m, 3H), 2.28 (br s, 1H), 2.88–2.96 (m, 1H), 3.03–
3.10 (m, 1H), 3.21–3.28 (m, 1H), 3.97–4.05 (m, 2H), 4.22–4.30 (m, 1H), 6.79–
cyclohexane/ethyl acetate); mp 70–71 °C; ½a D25
ꢂ
ꢀ34.5 (c1, methanol); 1H NMR
(DMSO-d6, 100 °C) d 1.35 (s, 6H), 1.41 (s, 3H), 1.42–1.96 (m, 4H), 2.38–2.47 (m,
2H), 3.07–3.15 (m, 1H), 3.28–3.36 (m, 1H), 3.43–3.48 (m, 2H), 3.69–3.74 (m,
2H), 3.77–3.79 (m, 1H), 4.12–4.15 (m, 1H), 4.16 (br s, 1H), 7.18–7.35 (m, 10H).
18. (2R,20S)-7: isolated as a colourless oil by chromatography on silica gel (eluent
6.91 (m, 4H). (2R,20S)-2a Hydrochloride: Mp 154–155 °C; a 2D5
½ ꢂ +68.3 (c2,
EtOH); 1H NMR (DMSO-d6) d 1.75–2.12 (m, 4H), 3.11–3.23 (m, 2H), 3.59–3.68
(m, 1H), 4.07 (dd, J = 11.8, 6.6 Hz, 1H), 4.32 (dd, J = 11.8, 2.5 Hz, 1H), 4.45–4.50
(m, 1H), 6.83–6.93 (m, 4H), 9.46 (br s, 2H).
97:3 ethyl acetate/triethylamine);
spectrum as described in Ref. 11.
½
a 2D5
ꢂ
ꢀ32.8 (c1, methanol); 1H NMR
19. (2S,20S)-7: Isolated as a colourless oil by chromatography on silica gel (eluent
43. (2S,20S)-2a: Isolated as a colourless oil by diethyl ether/aq KOH extraction from
the reaction mixture and concentration of the organic phase; 1H NMR (CDCl3) d
97:3 ethyl acetate/triethylamine); ½a D25
ꢂ
ꢀ71.4 (c1, methanol); 1H NMR (CDCl3)