Journal of Medicinal Chemistry
Article
K2CO3 (1.20 g, 8.60 mmol) and trichloroacetonitrile (0.849 mL, 8.40
mmol) were added. The mixture was stirred at room temperature for 2
h. The mixture was purified by flash chromatography (silica gel, 20 cm
× 1.5 cm, toluene−EtOAc, 1:2 → EtOAc, containing 0.2% (v/v)
Et3N) to give the desired trichloroacetimidate34 31 as a white fluffy
powder (795 mg, 86%). The compound was dried over P2O5
overnight and stored at −20 °C.
solution of NaOH (5 M, 5 drops) and dialyzed against water (4 L)
using a Slide-A-Lyzer cassette (2000 MWCO, 4−12 mL) for 16 h at
room temperature. The dialysis against water (4 L) was continued at 0
°C for 3 days, whereby the water was changed after each 24 h, as well
as an aqueous solution NH4HCO3 (3 M, 0.6 mL) was added to the
water to set the pH to ∼6.0−6.5. The desalted solution was then
lyophilized to afford the polysulfate 18 as a white fluffy powder (97
mg, 89%, 99% pure by CE20). 1H NMR (400 MHz, D2O): δ 5.63 (d, 1
H, J1,2 = 3.3, H1), 5.60 (d, 1 H, J1,2 = 3.6, H1), 5.50 (d, 1H, J1,2 = 3.6,
H1), 5.01 (d, 1H, J1,2 = 4.8, H1I), 4.10−4.93 (m, 23H, 4 × H2, 4 ×
H3, 4 × H-4, 3 × H5, 8 × H6), 4.05 (m, 1H, H5I), 3.76 (m, 1 H, H-3
chol), 0.54−1.97 (m, 33 H, 12 × CH2, 9 × CH), 0.86 (d, 3H, J = 6.5,
cholestanyl-CH3), 0.795 (d, 3H, J = 6.6, cholestanyl-CH3), 0.792 (d,
3H, J = 6.6, cholestanyl-CH3), 0.76 (s, 3H, cholestanyl-CH3), 0.61 (s,
3H, cholestanyl-CH3). Polysulfate 18 was also analyzed by 1D and 2D
NMR spectroscopy in D2O at 600 MHz, and the 1H and 13C chemical
shift data are presented in Tables S3 and S4. Chemical shifts were fully
assigned using gHSQC, gCOSY, gHMBC, TOCSY, and ROESY
techniques.
Biological Assays. Growth Factor Binding Assays. The
binding affinities of the compounds for the growth factors FGF-1,
FGF-2, and VEGF were determined on a BIAcore 3000 (BIAcore,
Uppsala, Sweden) using a surface plasmon resonance-based solution
affinity assay, as previously described.21,22 Heparin-coated CM4 sensor
chips were prepared via reductive amination of the reducing end
aldehyde with 1,4-diaminobutane, as previously described.22 Ligands
binding to FGF-1 and VEGF were measured in HBS-EP buffer (10
mM HEPES, pH 7.4, 150 mM NaCl, 3.0 mM EDTA, and 0.005% (v/
v) polysorbate 20), while binding to FGF-2 was measured in HBS-EP
buffer containing 300 mM NaCl. Sensorgram data were analyzed using
the BIAevaluation software, version 4.1 (BIAcore), and Kd values were
determined as previously described.22 The Kd values represent the
3β-Cholestanyl 2,3,4,6-Tetra-O-acetyl-α-D-glucopyranosyl-
(1→4)-2,3,6-tri-O-acetyl-α-D-glucopyranosyl-(1→4)-2,3,6-tri-O-
acetyl-α-D-glucopyranosyl-(1→4)-2,3,6-tri-O-acetyl-β-D-gluco-
pyranoside (32). The trichloroacetimidate 31 (300 mg, 0.221
mmol), cholestanol (2 equiv, 172 mg, 0.442 mmol), and 3 Å molecular
sieves (100 mg) were stirred in dry DCM (1.5 mL) for 0.5 h. A
solution of TMSOTf in dry DCM (0.4 M, 0.275 mL, 0.11 mmol, 0.5
equiv) was added dropwise at 0 °C. After 30 min at room temperature,
another portion of TMSOTf in dry DCM (0.4 M, 0.2 mL, 0.08 mmol,
0.36 equiv) was added and stirring continued for 30 min at room
temperature. The reaction was quenched by adding Et3N (0.025 mL)
at 0 °C. After being stirred for 10 min, the mixture was filtered through
a plug of Celite (0.5 cm) and washed with DCM (5 × 25 mL) and
EtOAc (3 × 25 mL). Both organic phases were washed separately with
saturated NaHCO3 solution (3 × 25 mL) and brine (25 mL). Aqueous
extracts were combined and re-extracted with EtOAc (3 × 30 mL).
The EtOAc extracts were combined and washed with brine (30 mL),
combined with the other organic extracts and dried (Na2SO4). The
solution was filtered and concentrated in vacuo to afford a yellow foam
(480 mg). Flash chromatographic purification (silica gel, 30 cm × 5
cm, toluene/EtOAc, 3:2 → 1:1 → 1:2 → EtOAc, containing 0.2%
Et3N (v/v)) afforded two fractions. Fraction A gave the desired β-
linked glycoside 32 as a white foam (81 mg, 23%), and fraction B
contained 77% partially deacetylated α-linked glycoside and 23%
1
partially deacetylated β-linked glycoside (118 mg). H NMR (CDCl3,
400 MHz): δ 5.24−5.45 (m, 7H, 3 × H1, 4 × H3), 5.08 (t, 1H, J3,4
=
average of at least duplicate measurements
SD. The data are
J4,5 = 9.80 Hz, H4IV) 4.86 (dd, 1H, J1,2 = 4.1, J2,3 = 10.4, H2IV), 4.70−
4.80 (m, 3H, 3 × H2), 4.63 (d, 1H, J1,2 = 7.7, H1I), 4.33−4.54 (m, 4H,
4 × H6), 3.86−4.31 (m, 10 H, 3 × H4, 3 × H5, 4 × H6), 3.70 (ddd,
1H, H5I), 3.56 (m, 1H, cholestanyl-H3), 2.20, 2.19, 2.16, 2.11, 2.07,
2.04, 2.03, 2.02, 2.015, 2.010, 2.00, 1.99 (s, 39H, 13 × Ac), 0.55−2.00
(m, 33H, 12 × CH2, 9 × CH), 0.90 (d, 3H, J = 6.6, cholestanyl-CH3),
0.871 (d, 3H, J = 6.6, cholestanyl-CH3), 0.867 (d, 3H, J = 6.6,
cholestanyl-CH3), 0.78 (s, 3H, cholestanyl-CH3), 0.65 (s, 3H,
cholestanyl-CH3).
presented in Table 1.
Heparanase Inhibition Assay. The inhibitory potency of the test
compounds against recombinant human heparanase was determined
by the fondaparinux assay as previously described.23 Briefly, assay
solutions (100 μL) comprised 40 mM sodium acetate buffer, pH 5.0,
100 mM fondaparinux (GlaxoSmithKline) with or without inhibitor.
Heparanase was added to a final concentration of 140 pM to start the
assay. The plates were sealed with adhesive tape and incubated at 37
°C for 2−24 h before the assays were stopped by the addition of 100
μL of a solution containing 1.69 mM 4-[3-(4-iodophenyl)-2-(4-
nitrophenyl)-2H-5-tetrazolio]-1,3-benzene disulfonate (WST-1, Aus-
pep, Melbourne, Australia) in 0.1 M NaOH. The plates were resealed
with adhesive tape and developed at 60 °C for 60 min, and the
absorbance was measured at 584 nm (Fluostar, BMG Labtech). In
each plate, a standard curve constructed with D-galactose as the
reducing sugar standard was prepared in the same buffer and volume
over the range of 2−100 μM. The IC50 value was determined and
converted to a Ki using the method of Cheng and Prusoff.35 All curve
fitting was done using BIAevaluation software, version 4.1 (Biacore).
Growth Factor Induced Endothelial Cell Proliferation Assay.
Endothelial cell culture using HUVEC cells was carried out as
previously described.16 Test compounds were weighed out from
powder stocks and diluted in PBS to 10 mM stock solutions and
stored at −80 °C. For experiments, compounds were subsequently
diluted in EBM-2 medium (supplemented with 2% FBS and
gentamicin) to various working concentrations as required. The
proliferation assays using various concentrations of the growth factor
VEGF, FGF-1, or FGF-2 were carried out as previously described.16
Briefly, 100 μL of cells was added to each well at concentrations
between 1 × 103 and 3 × 103 per well. Growth factors and test
compounds were then added in 50 μL volumes at specified
concentrations (typically seven ranging from 1−50 μM in triplicate)
to obtain a final volume of 200 μL. Following incubation for 70 h, 20
μL of the CellTiter 96 Aqueous One solution cell proliferation assay
(Promega) was added for 2 h prior to reading the absorbance at 490
nm to obtain OD values. Once these values were subtracted from the
blanks (media only), the data were imported into BIAevaluation
3β-Cholestanyl α-D-Glucopyranosyl-(1→4)-α-D-glucopyrano-
syl-(1→4)-α-D-glucopyranosyl-(1→4)-β-D-glucopyranoside
(33). The peracetate 32 (75 mg, 0.047 mmol) was dissolved in
anhydrous MeOH (0.1 M) and treated with a solution of NaOMe in
MeOH (1.35 M, 0.2−0.6 equiv). The mixture was stirred at room
temperature for 3 h (monitored by TLC). Acidic resin AG-50W-X8
(H+ form) was added to adjust to pH 6−7. The mixture was filtered,
and the resin was rinsed with MeOH. The combined filtrate and
washings were concentrated in vacuo and thoroughly dried to give the
polyol 33 as a white solid (48 mg, 98%). ESMS m/z 1059.6 (M +
Na+); HR ESMS m/z 1059.5667 (M + Na+, calcd for C51H88O21Na+
1059.5710). Polyol 33 was analyzed by 1D and 2D NMR spectroscopy
1
in DMSO-d6 at 600 MHz and the H and 13C chemical shift data are
presented in Tables S1 and S2. Chemical shifts were fully assigned
using gHSQC, gCOSY, gHMBC, TOCSY, and ROESY techniques.
3β-Cholestanyl 2,3,4,6-Tetra-O-sulfo-α-D-glucopyranosyl-
(1→4)-2,3,6-tri-O-sulfo-α-D-glucopyranosyl-(1→4)-2,3,6-tri-O-
sulfo-α-D-glucopyranosyl-(1→4)-2,3,6-tri-O-sulfo-β-D-glucopyr-
anoside, Tridecasodium Salt (18, PG545). The polyol 33 (48 mg,
0.046 mmol) was dissolved in dry DMF (2.3 mL, 0.02 M) and freshly
washed and dried SO3−pyridine complex (285 mg, 3 equiv per OH
group, 1.79 mmol) added, and the mixture was stirred at 60 °C for 16
h. The reaction mixture was cooled to 0 °C for 10 min, then
neutralized by adding ice-cold aqueous NaOH solution (5 M, 2.1
equiv/SO3, 0.752 mL, 3.76 mmol) at 0 °C in one portion (to pH 12).
The suspension was stirred at 0 °C for 15 min, diluted with water (10
mL), and concentrated in vacuo at 40 °C. A pale yellow powder was
afforded, which was dissolved in water (10 mL), obtaining a solution
with pH 11.5. The solution was set to pH 12.5 by adding an aqueous
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dx.doi.org/10.1021/jm201708h | J. Med. Chem. 2012, 55, 3804−3813