J. McNulty et al. / Bioorg. Med. Chem. Lett. 19 (2009) 5607–5612
5611
this article. Similarly, the amine derived from 26 was also con-
verted to Boc-derivative 29 in 98% yield by reaction with Boc-
anhydride. Securing the MOM-azide 26 allowed us to circumvent
the O- to N-acyl migration that compromised the prior reduction
of azidobenzoate 18 in Scheme 2.1g Desilylated hydroxybenzamide
28 was obtained almost quantitatively from MOM-benzamide 27
by reaction with tetrabutylammonium fluoride (TBAF). A series
of 6-substituted analogs 30–32 were efficiently prepared (Scheme
2, steps m, n and o) directly from hydroxybenzamide 28. Straight-
forward global deprotection of 27 with 2 M HCl then led to the
3,4,5,6-tetrahydroxyhexyl-1-benzamide 20.
The library comprising compounds 18–21 (Scheme 2) as well as
26–32 (Scheme 3) was screened for CYP3A4 inhibitory activity via
kinetic monitoring of the conversion of 7-benzyloxyquinoline (BQ)
to 7-hydroxyquinoline (HQ) by fluorometric measurement of emis-
sion at 538 nm after excitation at 410 nm (see Supplementary
data), utilizing ketoconazole as control (Table 1).7
pounds 27 and 31 and the lesser active compounds shown here al-
low three major conclusions to be drawn. (i) Significant
interactions with the cytochrome CYP3A4 involve an H-bond
acceptor region at C3 (C1 in the alkaloid series). A small substituent
such as hydroxyl and acetoxy contributes to this cytochrome inter-
action. Compounds with a benzoyl group were less potent, while
the flexible MOM H-bond acceptor showed strong interaction. (ii)
The cytochrome interaction is enhanced when a bulky lipophilic
substituent is placed at C3 or C6 (C2 or C4 alkaloid numbering),7
indicating a strong interaction with a large hydrophobic binding
pocket in the cytochrome active site. Both activities are additive
in that the most potent cytochrome inhibitors have both a small,
flexible H-bond acceptor at C3 and a lipophilic substituent at C3
or C6. (iii) Lastly, a double bond between C1-C10b elicits strong
interaction with the cytochrome alone, as evidenced by the previ-
ous results contrasting the potency of narciclasine 6 with pancrat-
istatin 5. It is noteworthy that both pancratistatin 5 and B,C-seco-
pancratistatin 20 are inactive against CYP3A4, while narciclasine
The MOM-benzamide derivative 27 (Ki 0.03 lM) was shown to
be a powerful inhibitor with a potency equal to that of ketocona-
6 exhibits good activity (Ki 0.63 l
M).7 The present results are fully
zole. Removal of the MOM ether group results in a ꢀ6-fold drop
in accord with our earlier structure–activity CYP3A4 mapping con-
ducted in the lycorane series.7 Overall, these studies provide valu-
able insight into regions of the amaryllidaceae anticancer
pharmacophore likely to interact with CYP3A4. Recent studies
have focused on both narciclasine derivatives,2a–c,s and C1 ben-
zoyl2q and other1g,2r derivatives. The present results highlight re-
gions in the pancratistatin series that may affect the
bioavailability of the compounds, their capacity to elicit significant
drug–drug interactions and their inhibition of other crucial oxida-
tive processes carried out by this important enzyme. Compounds
that demonstrate ketoconazole-like activity may also contribute
to hepatic toxicity. Lastly, we have identified two derivatives 27
and 31 that exhibit CYP3A4 inhibitory activity at the nanomolar le-
vel, similar to the known inhibitor ketoconazole. Extension of these
leads towards the synthesis of potent, selective antifungal agents
and further extension of the CYP3A4 studies are ongoing in our
laboratories.
in activity as shown for hydroxybenzamide 19 with Ki 0.17 lM. A
pronounced reduction (ꢀ50-fold) in activity is observed in going
from MOM-benzamide 27 to desilylated analogue 28 (Ki
1.55 lM). Cleavage of both MOM and TBS groups from 19 produced
inactive 3,6-diol 21 while removal of all protecting groups gave the
3,4,5,6-tetrahydroxyhexylbenzamide 20 which also exhibited no
inhibition. Azides 18 and 26 were void of activity while replace-
ment of the benzamide moiety in 27 with a t-butyl carbamate re-
sulted in
a 10-fold decrease in activity as evident for 29.
Substitution of the 6-TBS group in 27 with other protecting groups
had effects on inhibitory activity to varying degrees; tosylate 31
was highly active (Ki 0.07
less active than 27 while acetate 32 was mildly active with Ki
1.01 M. The above activity data highlight several core pharmaco-
lM), TBDPS-benzamide 30 was 20-fold
l
logical elements of the potent CYP3A4 inhibitor 27. First, the 1-
benzamide functionality is essential as azides 18 and 26 were inac-
tive and since there is a ten fold difference in activity between
MOM-1-benzamide 27 and MOM-1-carbamate 29. This suggests
that this part of the molecule must occupy a fairly bulky, polar
pocket within the enzyme active site. There is a ꢀ6-fold modula-
tion in activity between hydroxybenzamide 19 and MOM-benzam-
ide 27, consistent with our earlier hypothesis that a relatively
small hydrogen bond acceptor is required at C3. The effect of the
silyl group on inhibition is observed to be dramatic as seen for
27 versus 28, pointing at a lipophilic binding site within the en-
zyme. Again, these results are fully consistent with the pronounced
CYP3A4 inhibitory effects of TBS-substituted derivatives of lycorine
4.7 Absence of both 3-MOM and 6-TBS groups results in complete
lack of activity as evident with 3,6-diol 21, while a further loss of
the 3,4-isopropylidene group also produces inactive tetra-
hydroxyhexylbenzamide 20. The effect of the isopropylidene group
is seen to serve as an anchor within a more rigid portion of the en-
zyme. The bulkiness of the 6-TBDPS group in 30 is somewhat det-
rimental to inhibition while introduction of a small, polar group
such as an acetate, as in 32, results in further loss of activity. Inter-
estingly, inhibition is sustained with the introduction of an O-tos-
ylate group at C6 as in 31 (Ki 0.07 lM), also highlighting the
requirement for heteroatom-containing functional groups (27, 30,
31 vs 32).
In conclusion, a more comprehensive view of the cytochrome
P450 3A4 inhibitory pharmacophore has been developed through
SAR studies with flexible, differentially functionalized pancratista-
tin analogs. This pharmacophore is worthy of significant consider-
ation, given the intensive efforts to advance a viable narciclasine 6
or pancratistatin 5 analog into clinical development. The results
detailed in our earlier report7 and the structural features of com-
Acknowledgments
We thank NSERC and McMaster University for financial support
of this work. We are grateful to Dr. D. Hughes for obtaining high
field NMR data.
Supplementary data
CCDC file 654288 contains the supplementary crystallographic
data for 16. These data can be obtained free of charge from The
article can be found, in the online version, at doi:10.1016/
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