Journal of Medicinal Chemistry
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(4 mL) for 10 min, then KOAc (0.927 g, 3 equiv), a solution of 13
(1.748 g, 1 equiv) in DMSO (8 mL), and bis(pinacolato)diboron (1.063 g,
1.3 equiv) were added and the reaction mixture heated at 80 °C for 16 h.
After cooling to rt, water (10 mL) was added and the mixture stirred for 3 h.
The solid was removed by filtration and washed with water (2 × 10 mL)
then purified by flash silica chromatography, elution gradient 60−100%
EtOAc in isohexane to give 29 as a pale-brown oil (1.704 g, 97%). 1H NMR
(400 MHz, CDCl3, δ): 8.35 (dd, J = 8.2, 3.1 Hz, 1H), 8.06−8.03 (m, 2H),
7.76 (d, J = 7.4 Hz, 1H), 7.56 (d, J = 2.6 Hz, 1H), 7.49 (t, J = 7.7 Hz, 1H),
7.28−7.25 (m, 1H), 4.44−4.38 (m, 1H), 4.19−4.14 (m, 1H), 3.65−3.59
(m, 1H), 1.87−1.36 (m, 8H), 1.42 (s, 9H), 1.35 (s, 12H).
N-((1s,4s)-4-(1,5-Dimethyl-1H-pyrazole-3-carboxamido)-
cyclohexyl)-5-fluoro-2-(3-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-
2-yl)phenoxy)nicotinamide 20. Prepared from 17 using general
method E, in 86% yield. 1H NMR (400 MHz, CDCl3, δ): 8.36 (dd, J =
8.3, 3.2 Hz, 1H), 8.10−8.04 (m, 2H), 7.74 (dd, J = 6.4, 1.0 Hz, 1H), 7.56
(d, J = 2.3 Hz, 1H), 7.49 (t, J = 7.8 Hz, 1H), 7.29 (ddd, J = 8.1, 2.5, 1.1
Hz, 1H), 6.65 (d, J = 7.4 Hz, 1H), 6.51 (s, 1H), 4.26−4.17 (m, 1H),
4.11−4.03 (m, 1H), 3.75 (s, 3H), 2.27 (s, 3H), 1.94−1.73 (m, 6H),
1.67−1.56 (m, 2H), 1.32 (s, 12H).
N-((1s,4s)-4-(1,5-Dimethyl-1H-pyrazole-3-carboxamido)-
cyclohexyl)-5-fluoro-2-(4′-(3-hydroxypropyl)biphenyl-3-
yloxy)nicotinamide 21a [General Method F]. Pd(PPh3)4 (24 mg,
0.02 equiv) was added to a mixture of 17 (0.600 g, 1 equiv), 4-(3-
hydroxypropyl)phenylboronic acid (0.224 g, 1.2 equiv), and Na2CO3
(0.330 g, 3 equiv) in water (2.5 mL) and THF (5 mL). The mixture was
heated at 70 °C for 18 h, then allowed to cool, diluted with EtOAc, and
washed with water and brine. The organic layer was dried (Na2SO4) and
concentrated to give crude product which was purified by flash silica
chromatography, eluting with 0−5% MeOH in EtOAc to give 21a as a
white foam (0.480 g, 79%). 1H NMR (400 MHz, CD3OD, δ): 8.37 (dd,
J = 8.2, 3.1 Hz, 1H), 8.11−8.05 (m, 2H), 7.55−7.47 (m, 4H), 7.37−7.35
(m, 1H), 7.25−7.22 (m, 2H), 7.16−7.12 (m, 1H), 6.67 (d, J = 7.7 Hz,
1H), 6.50 (s, 1H), 4.27−4.19 (m, 1H), 4.12−4.01 (m, 1H), 3.70 (t, J =
6.3 Hz, 2H), 3.66 (s, 3H), 2.74 (t, J = 7.8 Hz, 2H), 2.25 (s, 3H) 1.95−
1.75 (m, 6H), 1.67−1.54 (m, 4H).
using general method G, as the trifluoroacetic acid salt in 30% yield over
2 steps. 1H NMR (400 MHz, DMSO-d6, 90 °C, δ): 8.21 (d, J = 3.1 Hz,
1H), 8.12−8.07 (m, 1H), 8.03−7.95 (m, 1H), 7.63−7.55 (m, 2H),
7.51−7.44 (m, 2H), 7.44−7.40 (m, 1H), 7.32 (d, J = 8.2 Hz, 2H), 7.22−
7.14 (m, 1H), 6.97 (d, J = 7.7 Hz, 1H), 6.38−6.33 (m, 1H), 4.03−3.95
(m, 1H), 3.88−3.77 (m, 1H), 3.70 (s, 3H), 3.58−3.08 (m, 11H), 3.02−
2.91 (m, 2H), 2.91−2.70 (m, 2H), 2.24 (s, 3H), 2.02−1.61 (m, 14H).
LRMS: m/z 708 [M + H]+.
4-Hydroxy-3-(morpholinomethyl)benzaldehyde 22. 4-
Hydroxybenzaldehyde (10.0 g, 1 equiv) was dissolved in ethanol
(100 mL) and formaldehyde (37% in water, 6.1 mL, 1 equiv) added,
followed by morpholine (7.1 mL, 1 equiv). The reaction mixture was
heated at 78 °C for 6 h, left at rt overnight, then further additions of 37%
aqueous formaldehyde and morpholine (0.5 eq of each) were made
and the mixture heated at 78 °C for 5 h. The mixture was concen-
trated and the residue purified by flash silica chromatography, elution
gradient 20−50% EtOAc (containing 2% Et3N and 2% MeOH)
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in isohexane to give 22 as a colorless oil (11.00 g, 61%). H NMR
(500 MHz, CDCl3, δ): 9.82 (s, 1H), 7.72 (dd, J = 8.3, 1.9 Hz, 1H), 7.58
(s, 1H), 6.93 (d, J = 8.3 Hz, 1H), 3.85−3.70 (m, 4H), 3.80 (s, 2H),
2.70−2.50 (m, 4H).
4-Formyl-2-(morpholinomethyl)phenyl Trifluoromethane-
sulfonate 23. N-Phenyltrifluoromethanesulfonimide (5.09 g, 1.5 equiv)
was added to an ice-cooled solution of 22 (2.10 g, 1 equiv) and Et3N
(4 mL, 3 equiv) in CH2Cl2 (20 mL). The mixture was allowed to warm
to rt and stirred for a further 16 h. The solution was washed with water
and brine, dried (Na2SO4), and concentrated. The residue was purified
by flash silica chromatography eluting with 30% EtOAc in isohexane to
give 23 as a colorless oil (3.17 g, 95%). 1H NMR (400 MHz, CDCl3, δ):
10.05 (s, 1H), 8.02 (d, J = 2.2 Hz, 1H), 7.90 (dd, J = 8.3, 2.2 Hz, 1H),
7.44 (d, J = 8.4 Hz, 1H), 3.74−3.68 (m, 4H), 3.62 (s, 2H), 2.51−
2.42 (m, 4H).
tert-Butyl (1s,4s)-4-(5-Fluoro-2-(4′-formyl-2′-(morpholinomethyl)-
biphenyl-3-yloxy)nicotinamido)cyclohexylcarbamate 24. A solution
of K2CO3 (0.396 g, 3 equiv) in water (3 mL), 23 (0.405 g, 1.2 equiv) and
29 (0.530 g, 1 equiv) were added sequentially to a stirred solution
of Pd(OAc)2 (21 mg, 0.1 equiv) and SPhos (78 mg, 0.2 equiv) in MeCN
(5 mL). The mixture was heated at 70 °C for 2 h then cooled to rt,
extracted with EtOAc, washed with water and brine, dried (MgSO4), and
concentrated. The residue was purified by flash silica chromatography
eluting with 30% EtOAc in isohexane to give 24 as a brown foam
(0.560 g, 93%). 1H NMR (400 MHz, CDCl3, δ): 10.07 (s, 1H), 8.37
(dd, J = 8.2, 3.1 Hz, 1H), 8.06 (d, J = 3.1 Hz, 1H), 8.01 (d, J = 1.5 Hz,
1H), 7.96 (d, J = 7.3 Hz, 1H), 7.85 (dd, J = 7.8, 1.7 Hz, 1H), 7.59−
7.46 (m, 2H), 7.36 (d, J = 7.8 Hz, 1H), 7.32−7.29 (m, 1H), 7.23−7.17
(m, 1H), 4.56−4.41 (m, 1H), 4.22−4.13 (m, 1H), 3.67−3.60 (m, 1H),
3.60−3.55 (m, 4H), 3.49 (s, 2H), 2.41−2.30 (m, 4H), 1.89−1.47
(m, 8H), 1.43 (s, 9H).
N-((1s,4s)-4-(1,5-Dimethyl-1H-pyrazole-3-carboxamido)-
cyclohexyl)-2-(4′-(3-((3S,5R)-3,5-dimethylpiperazin-1-yl)-
propyl)biphenyl-3-yloxy)-5-fluoronicotinamide 11a [General
Method G]. To a solution of 21a (0.610 g, 1 equiv) and pyridine
(0.30 mL, 3.5 equiv) in CH2Cl2 (7 mL) was added mesyl chloride
(0.28 mL, 3.5 equiv) and the reaction stirred at rt overnight. The
reaction mixture was concentrated to give a residue which was
partitioned between EtOAc and aqueous 2 M HCl. The organic layer
was washed with further 2 M HCl, saturated aqueous NaHCO3, and
brine, dried (MgSO4), and concentrated to give a yellow oil. This
was triturated with ether to give the methanesulfonate as a white solid
(0.665 g, 96%). The methanesulfonate (0.145 g, 1 equiv) was added to a
microwave tube with cis-2,6-dimethylpiperazine (75 mg, 3 equiv) and
MeCN (1 mL). The reaction was microwaved at 80 °C for 30 min.
The crude product was purified by preparative HPLC to give
tert-Butyl (1s,4s)-4-(2-(4′-(((3S,5R)-3,5-Dimethylpiperazin-1-
yl)methyl)-2′-(morpholinomethyl)biphenyl-3-yloxy)-5-
fluoronicotinamido)cyclohexylcarbamate 30. 24 (0.280 g, 1
equiv) and cis-2,6-dimethylpiperazine (51 mg, 1 equiv) were stirred in
CH2Cl2 (10 mL) for 15 min. AcOH (51 μL, 2 equiv) was added,
followed by sodium triacetoxyborohydride (0.188 g, 2 equiv), and the
reaction stirred for a further 20 h. The reaction was quenched with
aqueous 2 M HCl, extracted with EtOAc, washed with water and brine,
dried (Na2SO4), and concentrated to give 30 as a light-brown foam
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11a trifluoroacetic acid salt as a white solid (86 mg, 43%). H NMR
(400 MHz, CD3OD, δ): 8.13−8.07 (m, 1H), 8.04 (d, J = 7.9 Hz, 1H),
7.54−7.36 (m, 5H), 7.24 (d, J = 7.2 Hz, 2H), 7.18−7.09 (m, 1H), 6.43
(s, 1H), 4.13−4.05 (m, 1H), 3.97−3.87 (m, 1H), 3.75−3.55 (m, 7H),
3.11−2.98 (m, 2H), 2.90−2.76 (m, 2H), 2.77−2.65 (m, 2H), 2.24
(s, 3H), 2.10−1.97 (m, 2H), 1.91−1.59 (m, 8H), 1.35 (d, J = 6.0 Hz,
6H). LRMS: m/z 682 [M + H]+.
N-((1s,4s)-4-(1,5-Dimethyl-1H-pyrazole-3-carboxamido)-
cyclohexyl)-5-fluoro-2-(4′-(2-hydroxyethyl)biphenyl-3-yloxy)-
nicotinamide 21b. Prepared from 20 and 2-(4-bromophenyl)ethanol
using general method F, in 70% yield. 1H NMR (400 MHz, CDCl3, δ):
8.38 (dd, J = 8.2, 3.1 Hz, 1H), 8.08 (d, J = 3.1 Hz, 1H), 8.06 (s, 1H),
7.56−7.48 (m, 4H), 7.38−7.34 (m, 1H), 7.29−7.26 (m, 2H), 7.17−7.13
(m, 1H), 6.67 (d, J = 7.5 Hz, 1H), 6.50 (s, 1H), 4.27−4.19 (m, 1H),
4.12−4.01 (m, 1H), 3.94−3.86 (m, 2H), 3.67 (s, 3H), 2.90 (t, J = 6.5 Hz,
2H), 2.25 (s, 3H), 1.96−1.75 (m, 6H), 1.68−1.57 (m, 2H).
1
(0.310 g, 96%). H NMR (300 MHz, CDCl3, δ): 8.36 (dd, J = 8.2,
3.1 Hz, 1H), 8.06 (d, J = 3.2 Hz, 1H), 8.02 (d, J = 7.5 Hz, 1H), 7.50 (t,
J = 7.9 Hz, 1H), 7.40−7.27 (m, 5H), 7.19−7.11 (m, 1H), 4.57−4.41
(m, 1H), 4.23−4.10 (m, 1H), 3.68−3.59 (m, 1H), 3.59−3.50 (m, 6H),
3.42 (s, 2H), 3.09−2.95 (m, 2H), 2.74−2.85 (m, 2H), 2.40−2.27
(m, 4H), 1.90−1.59 (m, 8H), 1.58−1.46 (m, 2H), 1.42 (s, 9H), 1.10
(d, J = 6.3 Hz, 6H).
N-((1s,4s)-4-Aminocyclohexyl)-2-(4′-(((3S,5R)-3,5-dimethyl-
piperazin-1-yl)methyl)-2′-(morpholinomethyl)biphenyl-3-
yloxy)-5-fluoronicotinamide 31. To a stirred solution of 30 (0.300 g,
1 equiv) in CH2Cl2 (1 mL) was added 4 M HCl in 1,4-dioxane (1 mL,
10 equiv). The reaction mixture was stirred at rt for 1 h then
concentrated to give 31 as the trihydrochloride salt (0.300 g, 99%).
N-((1s,4s)-4-(1,5-Dimethyl-1H-pyrazole-3-carboxamido)-
cyclohexyl)-5-fluoro-2-(4′-(2-(4-(pyrrolidin-1-yl)piperidin-1-yl)-
ethyl)biphenyl-3-yloxy)nicotinamide 11e. Prepared from 21b and
4-(pyrrolidin-1-yl)piperidine via the intermediate methanesulfonate
N
dx.doi.org/10.1021/jm5001216 | J. Med. Chem. XXXX, XXX, XXX−XXX