Brief Article
Journal of Medicinal Chemistry, 2010, Vol. 53, No. 6 2655
Inhibition Experiments and Inhibition Kinetics of Compound 4.
Recombinant human caspase-1 (Calbiochem) was diluted with
700 μL of buffer (identical to the assay medium except that it
lacks DMSO), divided into 70 μL aliquots, and stored at -80 °C.
A 1:20 dilution of these aliquots was used in the assays. Enzyme
activities were calculated from kinetic measurements by fluori-
metric detection of the product 7-amino-4-methylcoumarine
(AMC) at 30 °C in a plate reader (Polarstar BMG Labtech)
using black 96-well plates (final volume of 200 μL). The wave-
lengths for excitation and emission were 380 and 460 nm, respec-
tively. A 2 mM stock solution of the fluorogenic substrate Ac-Trp-
Glu-His-Asp-AMC (Calbiochem) was prepared in DMSO. The
final concentration was 5 μM. The assay medium consisted of
50 mM HEPES, pH 7.4, 100 mM NaCl, 10 mM DTT, 1 mM
EDTA, 10% glycerol, 0.1% CHAPS, 1% DMSO. Stock solutions
of the inhibitors (each 5 mM) were prepared in DMSO.
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Inhibition by 4 of caspases 3 and 8 is described in the
Supporting Information (Figure S2).
MTT Cytotoxicity Assay. The cytotoxicity of the caspase-1
inhibitors was tested against HT29 colon cancer cells. Cells were
plated in a 96-well plate at 1 ꢀ 105 cells/well, using RPMI 1640
medium, and left to adhere overnight at 37 °C. The following day,
cells were treated with various drug concentrations and left to
incubate for 24 h at 37 °C. MTT dissolved in RPMI 1640 media
at 1 μg/mL was added to the cells (100 μL/well) and incubated for 1 h
at 37 °C to allow for MTT to be metabolized. Cells were then lysed
and crystals dissolved using isopropanol. Measurements were taken
using a Biotek Powerwave XS microwell plate reader at 570 nm.
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Acknowledgment. We thank the Australian Research
Council for a Federation Fellowship to D.P.F. and both
ARC and the National Health and Medical Research Council
of Australia for research support. R.L. thanks the German
Research Society (DFG) for a postdoctoral scholarship
(Grant LO1165/2-1) and Alun Jones for recording HRMS
spectra.
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enantiomeric purity of protected R-amino and peptide aldehydes.
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Supporting Information Available: Synthetic procedures and
characterization data of all compounds, docking images for 3
and 9, inhibition kinetics of 4 and demonstration of selectivity
over caspases 3 and 8, and experimental evidence for the
autoxidation of 16. This material is available free of charge via
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