Ruthenium/TFA-catalyzed regioselective C-3-alkylation of indoles with terminal alkynes in water: Efficient and unprecedented access to 3-(1-methylalkyl)-1H-indoles

Article abstract of DOI:10.1039/c002804e

An unprecedented C-3-alkylation reaction of indoles with terminal alkynes in aqueous medium has been developed using catalytic amounts of ruthenium and trifluoroacetic acid.

Full text of DOI:10.1039/c002804e

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Ruthenium/TFA-catalyzed regioselective C-3-alkylation of indoles
with terminal alkynes in water: efficient and unprecedented access
to 3-(1-methylalkyl)-1H-indolesw
´
Victorio Cadierno,* Javier Francos and Jose Gimeno*
Received 9th February 2010, Accepted 9th April 2010
First published as an Advance Article on the web 28th April 2010
DOI: 10.1039/c002804e
An unprecedented C-3-alkylation reaction of indoles with
terminal alkynes in aqueous medium has been developed using
catalytic amounts of ruthenium and trifluoroacetic acid.
Table 1 Ruthenium-catalyzed alkylation of indole with 1-hexynea
The search for new efficient and selective synthetic methods to
indoles continues to receive considerable attention since they
are key structural units in a huge number of natural products
and biologically active molecules.1 In this context, the well-known
nucleophilic nature of indolyl compounds, particularly at the
C-3 position,2 makes derivatization of the preformed hetero-
aromatic ring one of the most useful approaches to generate
functionalized derivatives.3 Among the different ways to
perform the alkylation of indoles, the 1,2-addition to carbonyl
compounds and imines, the Michael-type reactions with
electron-deficient olefins, the ring-opening of epoxides and
aziridines, and the well-known Pd-catalyzed allylic substitution
processes (Tsuji–Trost reaction), are probably the most
powerful and versatile ones.4,5
Entry Catalyst
Conversionb Yieldb
1
2
3
4
5
6
7
8
[{RuCl(m-Cl)(Z6-C6Me6)}2]
57%
48%
86%
91%
81%
70%
85%
82%
81%
73%
82%
77%
94%
[{RuCl(m-Cl)(Z6-1,3,5-C6H3Me3)}2] 93%
[{RuCl(m-Cl)(Z6-p-cymene)}2]
[{RuCl(m-Cl)(Z6-C6H6)}2]
[RuCl2(PPh3)3]
95%
87%
91%
85%
90%
89%
86%
90%
99%
99%
[Ru(Z3-2-C3H4Me)2(COD)]
[RuCl2(DMSO)4]
[RuCl(Z5-C5H5)(PPh3)2]
[RuCl(Z5-C9H7)(PPh3)2]
RuCl3ꢀnH2O
9
10
11
12
[RuCl2(Z3:Z2:Z3-C12H18)]
[{RuCl(m-Cl)(Z3:Z3-C10H16)}2]
a
Reactions performed under an N2 atmosphere at 100 1C using
1 mmol of indole (1 M solution in water) and 2.5 mmol of 1-hexyne.
Recent studies have shown that indoles can also be alkylated
using alkynes as electrophiles,6 via metal-catalyzed hydro-
arylation of the CRC bond,7 the intermolecular version of
this process giving an expeditious access to both 3-alkenyl-
indoles (A) and bis(indolyl)alkanes (B) (Scheme 1).
b
[Indole] : [alkyne] : [Ru] : [TFA] ratio = 100 : 250 : 2 : 50. Determined
by GC.
shown in Table 1, treatment of indole with excess of 1-hexyne
(2.5 equiv.) in water at 100 1C led, in the presence of usual
ruthenium complexes (2 mol% of Ru) and TFA (50 mol%), to
the high yield formation of 3-(1-methylpentyl)-1H-indole
(1a)12 instead of the corresponding 3-alkenyl-indole A or
bis(indolyl)alkane B.13 No influence of the oxidation state of
the metal on the reaction outcome was noted, both Ru(II)
(entries 1–9), Ru(III) (entry 10) and Ru(IV) (entries 11–12)
precatalysts being operative. Among them, the best result
was obtained with the bis(allyl)-ruthenium(IV) dimer
[{RuCl(m-Cl)(Z3:Z3-C10H16)}2],14 which afforded 1a in 94%
GC-yield after 24 h of heating (entry 12). Subsequent purification
by column chromatography on silica gel provided an analytically
pure sample of this alkylated indole in 84% isolated yield.
At this point, the following observations are of note: (i)
the process is regioselective with respect to the indole, N- or
C-2-substituted products not being observed in the crude
reaction mixtures, (ii) the process is also regioselective with
respect to the alkyne, i.e. the Markovnikov addition product is
formed exclusively regardless of the catalyst employed, (iii) the
use of water as solvent is imperative, 1a being not formed in
organic media (refluxing toluene, THF or CH2Cl2 solutions),
(iv) the use of lower temperatures and/or TFA loadings
reduces the yield of 1a and slows down the reaction considerably,
However, despite its enormous synthetic potential, to date
efficient catalysts available for these transformations are very
scarce (mainly Ga(III), Pt(II), Au(I) and Au(III) derivatives).6
This fact, along with our current interest in the application of
ruthenium catalysts in heterocyclic chemistry,8 encouraged us
to study the suitability of ruthenium to promote alkylation
reactions of indoles with alkynes.9,10 In the context of these
studies, a surprising and unprecedented result was encountered
by performing the catalytic reactions in aqueous medium,11
and in the presence of trifluoroacetic acid (TFA). Thus, as
Scheme 1 Metal-catalyzed alkylations of indoles with alkynes.
´
´
´
Departamento de Quımica Organica e Inorganica. IUQOEM,
University of Oviedo, E-33006 Oviedo, Spain. E-mail: vcm@uniovi.es,
jgh@uniovi.es; Fax: (+34)985103446; Tel: (+34)985102985
w Electronic supplementary information (ESI) available: Characterization
data and copies of the NMR spectra of all compounds. See DOI: 10.1039/
c002804e
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Table 2 Scope of the alkylation reaction of indoles with terminal alkynes catalyzed by complex [{RuCl(m-Cl)(Z3:Z3-C10H16)}2] in watera
Entry Indole
Alkyne
Product
Yieldb Entry Indole
Alkyne
Product
Yieldb
0%
1
84%
79%
76%
57%
64%
11
12
13
14
15
2
3
4
5
82%
79%
69%
67%
6
69%
16
57%
7
8
9
83%
68%
60%
0%
17
18
19
20
82%
87%
60%
65%
10
a
Reactions performed under an N2 atmosphere at 100 1C using 1 mmol of the corresponding indole (1 M solution in water) and 2.5 mmol of the
appropriate terminal alkyne. [Indole] : [alkyne] : [Ru] : [TFA] ratio = 100 : 250 : 2 : 50. Isolated yield after chromatographic work-up.
b
and (v) the excess of 1-hexyne present in the reaction medium
is totally consumed during the catalytic reaction.13 In addition,
when a stoichiometric amount of 1-hexyne was used (indole :
alkyne ratio = 1 : 1) the yield of 1a also decreased, recovering
part of the indole unchanged.
Using complex [{RuCl(m-Cl)(Z3:Z3-C10H16)}2] the scope of
this unusual alkylation reaction was explored (see Table 2).z
The generality with respect to the terminal alkyne was firstly
evaluated. Thus, as observed for 1-hexyne (entry 1), other
aliphatic alkynes (entries 2–9) were able to couple with indole,
the resulting 3-(1-methylalkyl)-1H-indoles 1b–i being isolated
in moderate to good yields (57–83%) after 24 h of heating. In
contrast, starting from aromatic substrates, such as phenyl-
acetylene or p-tolylacetylene, mixtures containing the expected
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E. F. V. Scriven and R. J. K. Taylor, Elsevier, Oxford, 2008, vol. 3,
pp. 269–351.
4 (a) S.-L. You, Q. Cai and M. Zeng, Chem. Soc. Rev., 2009, 38, 2190;
(b) T. B. Poulsen and K. A. Jørgensen, Chem. Rev., 2008, 108, 2903;
(c) N. Saracoglu, Top. Heterocycl. Chem., 2007, 11, 1; (d) M. Bandini,
A. Melloni, S. Tommasi and A. Umani-Ronchi, Synlett, 2005, 1199;
(e) S. Cacchi and G. Fabrizi, Chem. Rev., 2005, 105, 2873.
5 Alkylation of indoles with alcohols using transition metal- and
Lewis or Brønsted acid-catalyzed methodologies has also emerged
as an area of intense activity in recent years: R. Sanz, D. Miguel,
J. M. Alvarez-Gutierrez and F. Rodrıguez, Synlett, 2008, 975 and
references cited therein.
Scheme 2 Proposed mechanism.
6 See, for example: (a) J. S. Yadav, B. V. S. Reddy, B. Padmavani and
M. K. Gupta, Tetrahedron Lett., 2004, 45, 7577; (b) V. Mamane,
P. Hannen and A. Furstner, Chem.–Eur. J., 2004, 10, 4556;
(c) C. Ferrer and A. M. Echavarren, Angew. Chem., Int. Ed., 2006,
45, 1105; (d) Y. Zhang, Tetrahedron, 2006, 62, 3917; (e) C. Ferrer, C.
H. M. Amijs and A. M. Echavarren, Chem.–Eur. J., 2007, 13, 1358;
(f) S. B. Bhuvaneswari, M. Jeganmohan and C.-H. Cheng,
Chem.–Eur. J., 2007, 13, 8285; (g) J. Barluenga, A. Fernandez,
F. Rodrıguez and F. J. Fananas, J. Organomet. Chem., 2009, 694, 546.
7 For a general review on the hydroarylation of alkynes, see:
C. Nevado and A. M. Echavarren, Synthesis, 2005, 167.
8 (a) V. Cadierno, J. Gimeno and N. Nebra, Adv. Synth. Catal.,
2007, 349, 382; (b) V. Cadierno, J. Gimeno and N. Nebra,
Chem.–Eur. J., 2007, 13, 9973; (c) V. Cadierno, J. Dıez,
J. Gimeno and N. Nebra, J. Org. Chem., 2008, 73, 5852;
(d) V. Cadierno, J. Gimeno and N. Nebra, J. Heterocycl. Chem.,
2010, 47, 233.
alkylated indoles, albeit in very low yields (ca. 15%; GC-MS
determined), were obtained. The major formation of several
uncharacterized by-products prevented in these cases the
isolation of the desired products (entries 10–11).
The compatibility of this C–C coupling reaction with other
indolyl derivatives was also investigated. Thus, as shown in
entries 12–20, several NH-indoles substituted at the benzenoid
moiety could be effectively alkylated with 1-hexyne to afford
the novel compounds 1j–r in 57–87% yield. No remarkable
influence of the position and electronic nature of the substituents
was observed.
A tentative mechanistic proposal explaining the formation
of 1a–r is depicted in Scheme 2. Initially, a Ru-catalyzed
Markovnikov hydration of the alkyne, a process favoured in
acidic media,15 takes place, generating a methyl ketone which
readily undergoes 1,2-addition of the indolyl unit.13b Then, an
acid-catalyzed dehydration of the resulting alcohol C probably
occurs leading to the 3-alkenyl intermediate D.16 Final reduction
of the CQC bond of D by in situ formed Ru-hydride species
delivers the observed products.17
9 The utility of Ru catalysts to promote selective transformations of
alkynes has been largely demonstrated: (a) B. M. Trost,
M. U. Frederiksen and M. T. Rudd, Angew. Chem., Int. Ed.,
2005, 44, 6630; (b) C. Bruneau and P. H. Dixneuf, Angew. Chem.,
Int. Ed., 2006, 45, 2176; (c) B. M. Trost and A. McClory,
Chem.–Asian J., 2008, 3, 164.
10 Ru-catalyzed hydroarylations of alkynes are scarce, being mainly
restricted to intramolecular processes. See ref. 7.
11 The development of organic transformations in aqueous media is a
topic of primary interest in modern chemistry: (a) C.-J. Li and
T. H. Chan, Comprehensive Organic Reactions in Aqueous Media,
John Wiley & Sons, Hoboken, 2007; (b) Organic Reactions in
Water: Principles, Strategies and Applications, ed. U. M.
Lindstrom, Blackwell Publishing Ltd, Oxford, 2007; (c) L. Chen
and C.-J. Li, Adv. Synth. Catal., 2006, 348, 1459.
12 A.-M. L. Hogan and D. F. O0Shea, J. Org. Chem., 2008, 73, 2503.
13 (a) Alkyne oligomers as well as minor amounts of a by-product,
whose mass spectrum could correspond to the bis(indolyl) derivative
2 (MS (EI, 70 eV): m/z 316 (M+, 10%), 301 (M+ ꢂ Me, 5%),
259 (M+ ꢂ Bu, 100%), 243 (M+ ꢂ Me ꢂ Bu, 10%)), were detected
in the crude reaction mixtures by 1H NMR spectroscopy and
In summary, an unprecedented and high-yielding procedure
for the regioselective C-3 alkylation of indoles with alkynes in
aqueous medium has been developed. Further studies aimed
at clarifying the mechanism of this catalytic process and
broadening its scope to the alkylation of other heteroaromatic
substrates (pyrroles, furans, benzofurans, etc.) are currently in
progress in our lab.
This work was supported by MICINN (Projects
CTQ2006-08485/BQU and CSD2007-00006) and FICYT
(Project IB08-036). J.F. thanks MICINN and the ESF for
the award of a PhD grant.
GC/MSD. Formation of
2 is responsible for the difference
observed between indole conversion and product yield;
(b) Intermediate formation of hexan-2-one was observed by
monitoring the reaction of indole with 1-hexyne by GC/MSD
Notes and references
z General procedure for the catalytic reactions: the corresponding
indole (1 mmol), the appropriate terminal alkyne (2.5 mmol) and
water (1 cm3) were introduced into a sealed tube under a nitrogen
atmosphere. [{RuCl(m-Cl)(Z3:Z3-C10H16)}2] (0.006 g, 0.01 mmol;
2 mol% of Ru) and TFA (0.037 cm3, 0.5 mmol) were then added at
room temperature, and the resulting suspension heated at 100 1C for
24 h. After removal of the volatiles under vacuum, the residue was
purified by column chromatography (silica gel) using a mixture of
EtOAc/hexanes (1 : 50) as eluent.
.
14 For a review on this dimer, see: V. Cadierno, P. Crochet,
S. E. Garcıa-Garrido and J. Gimeno, Curr. Org. Chem., 2006,
10, 165.
15 F. Alonso, I. P. Beletskaya and M. Yus, Chem. Rev., 2004, 104,
3079.
1 See, for example: (a) R. J. Sundberg, Indoles, Academic Press,
San Diego, 1996; (b) K. Higuchi and T. Kawasaki, Nat. Prod. Rep.,
2007, 24, 843; (c) S.-M. Li, Nat. Prod. Rep., 2010, 27, 57.
16 Addition of a second molecule of indole to intermediate D could
explain the formation of the side-product 2.
2 S. Lakhdar, M. Westermaier, F. Terrier, R. Goumont, T. Boubaker,
A. R. Ofial and H. Mayr, J. Org. Chem., 2006, 71, 9088.
17 These hydride species, presumably generated from the excess of
terminal alkyne present via oxidative addition to Ru(II) centres,
could also be responsible for the alkyne oligomers observed. We
note that Ru(IV)/Ru(II) reductions are well-known in the chemistry
of [{RuCl(m-Cl)(Z3:Z3-C10H16)}2]. See ref. 14 and V. Cadierno,
S. E. Garcıa-Garrido and J. Gimeno, J. Am. Chem. Soc., 2006, 128,
15094.
3 (a) B. A. Trofimov and N. A. Nedolya, in Comprehensive Hetero-
cyclic Chemistry III, ed. A. R. Katritzky, C. A. Ramsden, E. F. V.
Scriven and R. J. K. Taylor, Elsevier, Oxford, 2008, vol. 3,
pp. 45–268; (b) J. Bergman and T. Janosic, in Comprehensive
Heterocyclic Chemistry III, ed. A. R. Katritzky, C. A. Ramsden,
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Chem. Commun., 2010, 46, 4175–4177 | 4177