Qiang et al.
subjected to deprotection of ethoxymethyl group to afford
3-hydroxy-2,6-difluorobenzamide (31) in good yield. The
alkylation of 31 with substituted benzyl chloride or bromide
(sodium iodide was not needed for the benzyl bromide) in
the presence of sodium iodide and potassium carbonate
produced the target compounds 32–43 in 61-66% yields.
the most effective cell division inhibitory activity (2 lg/mL)
and antibacterial activity (2 lg/mL) against S. aureus
ATCC25923, revealing 1024- and 512-fold higher activity
than its precursor 31, respectively. Furthermore, com-
pounds 36 and 41 exerted the most powerful activity
against the above-mentioned bacterial strains among all of
the tested compounds 4–26 and 32–43 as well. Although
3-chloro and 3-methyl groups of the two compounds
shared conflicting electrical characters to each other, they
showed electron-donating groups on the benzene ring in
the structures and belonged to hydrophobic groups. The
two hydrophobic groups might display the hydrophobic
interactions with the binding site of the thiazolopyridine
moiety of PC190723, formed by the amino acid residues
(21). Besides, compounds 34, 37, 38 and 41 against
B. subtilis ATCC9372 and compound 36 against S. au-
reus ATCC25923 were also found to possess potent
antibacterial activity (8, 8, 8 and 4 lg/mL).
Biological activity
Cell division inhibitory activity and in vitro antibacterial
activity for the 3-O-arylalkylbenzamide derivatives 4–26 are
shown in Table 1. Almost all of them showed greatly
improved cell division inhibitory activity against B. subtilis
and S. aureus, and significantly enhanced antibacterial
activity against B. subtilis and three tested strains of S. au-
reus, but failed to exhibit an improvement in antibacterial
activity against S. pyogenes and S. pneumonia compared
with 3-MBA or their precursor 2. In the subseries of the 3-
O-alkylbenzamide derivatives 4–8, compound 6 with iso-
butyl group was found to possess not only the most
greatly improved cell division inhibitory activity against
B. subtilis ATCC9372 and S. aureus ATCC25923, being
128- and 256-fold better than its precursor 2, but also the
most remarkably antibacterial activity against B. subtilis
In general, the two subseries of the 3-O-arylalkylbenza-
mide derivatives 9–22 and the 3-O-arylalkyl-2,6-difluo-
robenzamide derivatives 32–43 had the similar trend in cell
division inhibitory activity and antibacterial activity. In addi-
tion, the most active compounds 14 and 36 in their
respective subseries had the same side chain of 3-
O-chlorobenzyl group, and similarly, the most active
compounds 20 and 41 also had the same side chain of
3-O-methylbenzyl group. However, the 3-O-arylalkyl-
2,6-difluorobenzamide derivatives 32–43 showed much more
potent on-target activity and antibacterial activity than the
3-O-arylalkylbenzamide derivatives 9–22. For example,
compound 36 was 32-, 4-, and 8-fold more effective than
compound 14 in antibacterial activity against B. subtilis
ATCC9372, S. aureus ATCC25923, and S. aureus
ATCC29213, respectively, while compound 41 was 8- and
4-fold more active than compound 20 in antibacterial
activity against B. subtilis ATCC9372 and S. aureus
ATCC25923, respectively. The difference in the antibacte-
rial activity could be attributed to the mother nucleus of
2,6-difluorobenzamide that was more helpful in a remark-
able improvement in on-target activity and antibacterial
activity than that of the benzamide. For instance, com-
pounds 14 and 36 might bind to the binding pocket of
PC190723 on FtsZ due to their structural similarities. The
crystal structure of PC190723 with S. aureus FtsZ has
indicated that two fluoro groups in its scaffold display
important hydrophobic interactions with the surrounding
amino acid residues (21). Accordingly, the hydrophobic
interactions also make compound 36 share better activity
than compound 14. These results described above made
us conclude that (i) the introduction of the 3-monosub-
stituented benzyl side chain would be more benefi-
cial for increasing cell division inhibitory activity against
B. subtilis and S. aureus and antibacterial activity against
B. subtilis ATCC9372, S. aureus ATCC25923, S. aureus
ATCC29213, and S. aureus PR than other monosub-
stituented or multisubstituented benzyl side chain and
especially, 3-O-chloro or 3-O-methyl group on the benzyl
ATCC9372,
S. aureus
ATCC25923,
S. aureus
ATCC29213, and S. aureus PR, exhibiting 64-, 256-fold,
128-, and 256-fold higher activity than 3-MBA, respec-
tively. In the subseries of the 3-O-arylalkylbenzamide
derivatives 9–23, compound 14 with 3-O-chlorobenzyl
group was the most effective in cell division inhibitory
activity against B. subtilis ATCC9372 and antibacterial
activity against B. subtilis ATCC9372 and S. aureus PR,
showing 512-, 32-, and 256-fold better activity than their
precursor 2, respectively. In contrast, compound 20 with
3-O-methylbenzyl group was the most active in cell divi-
sion inhibitory activity against S. aureus ATCC25923 and
antibacterial activity against S. aureus ATCC25923, S. au-
reus ATCC29213, and S. aureus PR, being 1024-, 512-,
256-, and 256-fold better than their precursor 2, respec-
tively. As for the subseries of the 3-O-elongated arylalkyl-
benzamide derivatives 24–26, however, they did not
displayed markedly improved on-target activity and
antibacterial activity.
Cell division inhibitory activity and in vitro antibacterial
activity for the 3-O-arylalkyl-2,6-difluorobenzamide deriva-
tives 32–43 are shown in Table 2. This series presented
an apparent improvement in cell division inhibitory activity
against B. subtilis and S. aureus and antibacterial activity
against all the tested strains in comparison with their pre-
cursor 31 and curcumin. In particular, compound 36 bear-
ing 3-O-chlorobenzyl group showed the best cell division
inhibitory activity (0.5 lg/mL) against B. subtilis ATCC9372
and the strongest antibacterial activity (0.5, 4, and 8 lg/
mL) against B. subtilis ATCC9372, S. aureus ATCC29213,
and S. aureus PR, displaying 2048-, 128-, and 64-fold
better activity than its precursor 31, respectively, while
compound 41 bearing 3-O-methylbenzyl group exhibited
260
Chem Biol Drug Des 2016; 87: 257–264