128
J.-Q. Liu et al. / Journal of Molecular Structure 987 (2011) 126–131
N, 10.68. Found C, 52.60; H, 3.12; N, 10.61. IR (KBr, cm–1): 2028(m),
1618(s), 1216(m), 638(s).
ligands (Cd–O bond distances range from 2.267(3) to 2.318(3) Å),
whereas the terminal Cd1 atom is coordinated by four oxygen
atoms (Cd–O bond distances range from 2.182(4) to 2.463(4) Å)
and two nitrogen atoms (Fig. 2a). Similar trinuclear Cd3(RCO2)6
cluster has been reported, in which is assembled from Cd atom
and flexible organic unit[4,23]. In the asymmetric unit, there are
two types of L2(1) and L2(2) ligands. The L2(1) adopts (k1–k1)–
(k1–k1)–l4 fashion and links the tri-metallic core to form a 1D
5. Results and discussion
5.1. Crystal structure of {[Cd3(L1)2(IP)2(H2O)4]}n (1)
Single-crystal X-ray structural analysis reveals that the asym-
metric unit of 1 contains one and a half Cd(II) atoms, one L1 ligand,
one IP and two coordination water molecules. Fig. 1a shows the
view of the local coordination geometries around the Cd(II) atoms.
The two Cd(II) atoms have different coordinative environments. As
for Cd1, the axial positions are occupied by one oxygen atom from
one bidentate carboxylate group and one oxygen atom from one
coordinative water molecule, whereas two oxygen atoms from
one coordinative water molecule and one bidentate carboxylate
end and two nitrogen atoms from one chelating IP ligand are on
the equatorial plane. The Cd2 has ideal octahedral coordination
geometry. The axial positions are occupied by two oxygen atoms
from two symmetric monodentate carboxylate groups, while the
four oxygen atoms from carboxylate groups of two different L1 li-
gands locate on the equatorial plane. The Cd–O bond distances
range from 2.175(4) to 2.401(4) Å, and the Cd–N bond distances
range from 2.354(5) to 2.388(5) Å. The three carboxylate groups
exhibit two kinds of coordination modes (monodentate and bridg-
ing bidentate fashions). Based on these connection nodes, four
chain along the c direction, while L2(2) adopts (k1–k1)–(k2–
l2)–l4
mode and connects the trinuclear unit to shape another 1D chain
along the a axis.
View from the ac plane reveals a (4, 4) topology structure
(Fig. 2b). The space is occupied by the guest CH3OH and DMF mol-
ecules. Each layer is slightly offset compared to adjacent layers
(Fig. 2d). A striking feature of 2 is the alternating arrangement of
three types of helices along a axis, which are formed by Cd2 and
two types of L2(1) and L2(2) ligands (Fig. 2c). The strong aromatic
stacking interaction of neighboring IP molecules is ca. 3.63(6) Å),
which further extended the structure into 3D framework (Fig. 2e).
5.3. Crystal structure of [Cd(L3)(IP)]n (3)
To further investigate the effect of assistant ligand on the
framework, the angular backbone of organic ligand was deliber-
ately employed. 1,3-Phenylenediacetic acid was introduced into
the Cd-IP system. A new compound 3 was obtained. The structure
of 3 has neutral sheet of [Cd(L3)(IP)]n. The Cd(II) ion is coordinated
by four oxygen atoms from two carboxylate groups and three
nitrogen atoms from two pyridine rings and one imidazole ring
(Fig. 3a). The Cd(II) metal centers are connected to each other by
L3 with syn–syn fashion into a 1D helical chain (Fig. 3c). In 3, IP
Cd(II) ions are bridged by four l2–carboxylate ends to give tetranu-
clear units, which are further extended by monodentate carboxyl-
ate ends into 2D layers along the ab plane, as shown in Fig. 1b.
From the [1 0 1] direction, nano-channels are directed by Cd ions
and L1 ligands (Fig. 1c and d). As presented in Fig. 1e, the Cd1
and Cd2 atoms are linked by O2C–C–CO2 groups of L1 ligand to
form the left- and right-handed helical chains running along the
c axis with a pitch of 12.86 Å. In addition, the interplanar distance
between pyridyl rings of IP ligands is ca. 3.86(5) Å, indicating the
adopts a
l2-bridging mode, linking the adjacent metal ions into a
zigzag chain (Fig. 3d). Ultimately, the whole structure displays a
2D framework. As shown in Fig. 3b. Each layer is slightly offset
compared to adjacent layers (Fig. 3e and f).
presence of weak
p–p stacking interaction that further stabilizes
the crystal structure (Fig. 1f).
5.4. Comparison of the structures of coordination polymers
5.2. Crystal structure of {[Cd2(L2)2(IP)2]ꢀ(CH3OH)(DMF)}n (2)
As a matter of fact, the coordination frameworks of most com-
plexes are not only influenced by metal ions, but also depend on
the reliable coordinative sites of carboxylate ligands. In this work,
we select three kinds of rigid/flexible carboxylic acid with H3L1,
H2L2 and H2L3, and intend to explore their effects on the assembly
In the structure, there are two crystallographically unique Cd(II)
atoms. The central Cd2 atom in each unit lies on an inversion cen-
tre and is coordinated by six oxygen atoms from separated L2
Fig. 1. (a) Stick representation of the coordination environments of the Cd(II) ions in 1 (i: x, ꢁ1 + y, z; ii: 1 + x, y, z; ii: 1 ꢁ x,1 ꢁ y, ꢁz). Hydrogen atoms have been omitted for
clarity; (b) view of the 2D layer along ab plane; (c) the 2D layer long ac direction; (d) view of 1D nano-tube channels along ac plane; (e) Schematic view of the double helical
chains; (f) the 3D supramolecular framework formed by aromatic stacking interactions.