DOI: 10.3109/14756366.2016.1140755
Mannich base derivatives of thymol
3
(m, 4H), 1.21 (d, J ¼ 7.2 Hz, 6H), 0.90 (t, J ¼ 7.2 Hz, 6H). 13C 15 min at room temperature prior to assay, in order to allow for
NMR (100 MHz, CDCl3) d: 156.1, 133.7, 133.5, 124.5, 120.6, the formation of the E-I complex. The inhibition percentages were
119.9, 55.7, 54.4, 26.6, 22.9, 19.8, 12.1. HRMS (ESI-MS) Calc. obtained by using PRISM 3, as reported earlier33, and represent
for C17H29NO [M + H]+ 264.2322; found 264.2346.
the mean from at least three different determinations. All CA
isoforms were recombinant ones obtained in-house as reported
earlier34. The cell pellets were lysed, and hCA II and hCA I were
purified through affinity chromatography using pAMBS resin.
3-Methyl-2-[(benzylamino)methyl]-6-(propan-2-yl)phenol, com-
pound 3
A viscous liquid, yield 10%. 1H NMR (400 MHz, CDCl3) d: 7.39-
7.28 (m, 5H), 7.01 (d, J ¼ 8.1 Hz, 1H), 6.72 (d, J ¼ 8.1 Hz, 1H),
Cytotoxicity evaluation
3.91(s, 2H), 3.89 (s, 2H), 3.28–3.25 (m, 1H), 2.08 (s, 3H), 1.23 (d, The cytotoxicity of the compounds were assayed towards human
J ¼ 6.6 Hz, 6H). 13C NMR (100 MHz, CDCl3) d: 151.6, 138.6, oral squamous cell carcinoma (Ca9-22, HSC-2, HSC-3, HSC-4)
133.9, 133.7, 129.3, 128.7, 127.6, 123.8, 121.8, 118.4, 81.6, 56.2, and human normal oral cells (HGF, HPLF, HPC) as described35
48.8, 26.5, 22.9, 18.3. HRMS (ESI-MS) Calc. for C18H23NO with some minor modifications. In brief, all cells were cultured in
[M + H]+ 270.1852; found 270.1855.
DMEM supplemented with 10% fetal bovine serum (FBS). The
following concentrations of the compounds in dimethylsulfoxide
(DMSO) were added to the medium and incubated at 37ꢀC for
48 h: compounds 1–7 (0.32, 1, 3.2, 10, 31.6, 100, 316, 1000 mM)
and Melphalan (3.12, 6.25, 12.5, 25, 50, 100, 200, 400 mM). The
media that contained the same concentration of DMSO (0.0078,
0.156, 0.03125, 0.0625, 0.125, 0.25, 0.5 or 1%) were used as
controls, since DMSO above 0.25% is cytotoxic. The viable cell
numbers were determined by the MTT method. The CC50 values
were determined from dose-response curves.
3-Methyl-2-[(dibenzylamino)methyl]-6-(propan-2-yl)phenol,
compound 4
A viscous liquid, yield 6%. 1H NMR (400 MHz, CDCl3) d: 11.40
(brs, 1H, –OH), 7.38–7.27 (m, 10H), 7.00 (d, J ¼ 7.9 Hz, 1H),
6.63 (d, J ¼ 7.9 Hz, 1H), 3.76 (s, 2H), 3.62 (s, 2H), 3.58 (s, 1H),
3.49 (d, J ¼ 8.4 Hz, 2H), 3.35–3.33 (m, 1H), 2.24 (s, 2H), 1.24 (d,
J ¼ 6.6 Hz, 6H).
5-Methyl-4-[(piperidin-1-yl)methyl]-2-(propan-2-yl)phenol,
compound 5
Results and discussion
The compounds investigated here were synthesized by the
conventional heating method. The mixture of thymol, formalin
solution and amine was refluxed in methanol; the reagents had the
same mole ratios. Although the same experimental procedure was
applied for the synthesis of phenolic mono Mannich bases of
thymol, the aminomethylation reaction took place at the ortho
position of phenol in the case of the reactions for compounds 2, 3
and 4, in which secondary or primary aliphatic amines were used.
A white solid, yield 12%, m.p. 148 ꢀC, 145 ꢀC31. 1H NMR
(400 MHz, CDCl3) d: 6.99 (s, 1H), 6.26 (s, 1H), 3.32 (s, 2H), 3.16
(q, J ¼ 6.9 Hz 1H), 2.42 (brs, 4H), 2.18 (s, 3H), 1.60–1.55
(m, 4H), 1.43 (brs, 2H), 1.21 (d, J ¼ 6.9 Hz, 6H).
5-Methyl-4-[(morpholino-4-yl)methyl]-2-(propan-2-yl)phenol,
compound 6
1
A white solid, yield 16%, m.p. 152 ꢀC, 152 ꢀC10. H NMR (400 On the other hand, aminomethylation reaction took place at para
MHz, CDCl3) d: 7.00 (s, 1H), 6.48 (s, 1H), 3.69 (brs, 4H), 3.38 position of phenol for the reactions of the compounds 1, 5, 6 and
(s, 2H), 3.16–3.13 (m, 1H), 2.44 (brs, 4H), 2.26 (s, 3H), 1.22 7. Secondary cyclic amines were used for the reactions of 5, 6 and
(d, J ¼ 6.9 Hz, 6H).
7. Compounds obtained with the secondary cyclic amines were
solid apart from the others. Unique pattern of reaction was
observed when the dimethyl amine (for compound 1) was used as
an amine component. Although compound 1 is aliphatic and non-
cyclic amine like dipropylamine (2), benzylamine (3) and
dibenzylamine (4), it gave different reaction from compounds 2
to 4. Aminomethylation reaction took place at para position of
phenol function in a similar way with secondary cyclic amines.
Actually, to occupy the place of aminomethylation, i.e. Mannich
reaction at ortho or para positions of phenol is an expected
scientific fact, since hydroxyl group is a first-class substituent and
direct substituent which will come to ortho or para position by
itself. What are the substituents on nitrogen and how the
substituents are located on it seems to be of great importance to
direct aminomethylation process of thymol to ortho or para
position of phenol function. Aminomethylation took place at para
position of phenol function when the substituents on nitrogen
were two methyls or bigger than this in size and these were
acceptable on the condition that the amine used was in cyclic form
in which free rotation was prevented as in the case of piperidine,
morpholine and N-methylpiperazine. On the other hand, amino-
methylation took place at ortho position of phenol function when
the two substituents on nitrogen had longer chain than methyl
(dipropylamine) and the hydrogens of methyl substituents located
on nitrogen were replaced by phenyl rings (dibenzylamine). Ortho
aminomethylation also occurred when the substituent was
benzylamine. In this case, there is one methyl substituent on
nitrogen and one of its hydrogens was replaced by phenyl
(benzylamine). The common point for the ortho substitution of
5-Methyl-4-[(N-methylpiperazin-1-yl)methyl]-2-(propan-2-
yl)phenol, compound 7
A white solid, yield 29%, m.p. 159 ꢀC. 1H NMR (400 MHz,
CDCl3) d: 7.00 (s, 1H), 6.45 (s, 1H), 3.38 (s, 2H), 3.21–3.14
(m, 1H), 2.47 (brs, 8H), 2.29 (s, 3H), 2.24 (s, 3H), 1.22 (d, J ¼ 6.9
Hz, 6H).
Biological activity
Carbonic anhydrase enzyme assay
An Applied Photophysics stopped-flow instrument has been used
for assaying the CA catalyzed CO2 hydration activity32. Phenol
red (at a concentration of 0.2 mM) has been used as an indicator,
working at the absorbance maximum of 557 nm, with 20 mM
Hepes (pH 7.5) as buffer, and 20 mM Na2SO4 (for maintaining
constant the ionic strength), following the initial rates of the CA-
catalyzed CO2 hydration reaction for a period of 10–100 s. The
CO2 concentrations ranged from 1.7 to 17 mM for the determin-
ation of the kinetic parameters and inhibition constants. For each
inhibitor, at least six traces of the initial 5-10% of the reaction
have been used for determining the initial velocity. The
uncatalyzed rates were determined in the same manner and
subtracted from the total observed rates. Stock solutions of
inhibitor (0.1 mM) were prepared in distilled-deionized water and
dilutions up to 0.01 nM were done thereafter with the assay buffer.
Inhibitor and enzyme solutions were preincubated together for