Y. Li et al.
European Journal of Pharmacology 907 (2021) 174297
months of treatment (Murtuza et al., 2019). The primary cause of ac-
quired resistance to third-generation EGFR TKIs was EGFRC797S muta-
tion (Niederst et al., 2015), along with ERBB2 and MET amplifications
KRAS mutations (Ortiz-Cuaran et al., 2016) as possible mechanisms. The
C797S mutation influences the covalent binding of AZD9291 and EGFR
by changing the cysteine sidechain. The acquired resistance together
with the high price and several adverse reactions limited the prescrip-
tion of AZD9291. Therefore, further exploration and research are
needed to find more safe, effective and economical agents to overcome
therapeutic resistances caused by EGFRC797S mutation in lung cancer.
In this study, a series of 5-chloropyrimidine-2,4-diamine derivatives
were synthesized and identified as potent EGFR inhibitors. We discov-
ered a novel selective EGFR TKI, XHL11, which effectively inhibited the
EGFRL858R/T790M and EGFRL858R/T790M/C797S kinases activity. Molecular
docking of the new compounds into the EGFR was also performed. The
down-regulation of EGFR and the down-stream pathways by XHL11
contributed to the apoptosis and the regulation of cellular proliferation
in H1975 cells with EGFRL858R/T790M mutation. These results suggested
that XHL11 might be developed as a promising EGFR TKI for the
treatment of NSCLC patients.
phenyl)amino)pyrimidin-2-yl)amino)phenyl)acrylamide was obtained
as a light white solid. Yield: 77%. Purity 99.53% (Fig. S1B), ESI-MS: m/z
= 471.11 [M + H]. 1H NMR (400 MHz, DMSO‑d6): δ (ppm): 1.16 (s, 3H),
1.17 (s, 3H), 3.48–3.45 (m, J = 2 Hz, 1H), 5.72–5.71 (d, J = 2 Hz, 1H),
5.74–5.73 (d, J = 2 Hz, 1H), 6.26–6.25 (t, J = 1.6 Hz, 1H), 7.38 (d, J =
0.2 Hz, 1H), 7.42–7.40 (m, J = 1 Hz, 4H), 7.74 (m, J = 0.2 Hz, 1H),
7.85–7.84 (d, J = 2 Hz, 1H), 7.87–7.86 (m, J = 2 Hz,1H), 8.18 (s, 1H),
8.28 (s, 1H), 9.46 (s, 1H), 9.52 (s, 1H), 10.05 (s, 1H). 13C NMR (101
MHz, DMSO‑d6): δ (ppm): 15.39, 55.38, 100.00, 105.02, 114.34,
120.15, 120.54, 124.23, 126.91, 131.47, 132.52, 133.95, 135.31,
136.26, 138.56, 155.43, 155.80, 158.18, 163.28.
Compound XHL 11 b: N-(3-((5-chloro-4-((2-(isopropylsulfonyl)
phenyl)amino)pyrimidin-2-yl)amino)phenyl)-2-cyanoacetamide
was
obtained as a light white solid. Yield: 82%. Purity 99.19% (Fig. S1C),
ESI-MS: m/z = 484.11 [M + H]. 1H NMR (400 MHz, DMSO‑d6): δ (ppm):
1.17 (s, 3H), 1.19 (s, 3H), 3.47–3.44 (t, J = 4 Hz, 1H), 3.87 (s, 2H),
7.17–7.16 (d, J = 1.3 Hz, 1H), 7.20–7.18 (d, J = 4 Hz, 1H), 7.38–7.37
(m, J = 2 Hz, 2H), 7.73–7.71 (d, J = 4 Hz, 1H), 7.85–7.83 (d, J = 4 Hz,
2H), 8.30 (s, 1H), 8.67–8.64 (d, J = 6 Hz, 1H), 9.54 (s, 1H), 9.62 (s, 1H),
10.23 (s, 1H). 13C NMR (101 MHz, DMSO‑d6): δ (ppm): 15.40, 27.23,
55.47, 105.61, 111.50, 113.78, 116.11, 116.48, 124.06, 124.24, 129.23,
131.48, 135.40, 138.50, 138.98, 140.99, 144.36, 155.31, 155.63,
158.06, 161.32.
2. Materials and methods
2.1. Chemistry
5-chloro-N4-(2-(isopropylsulfonyl)phenyl)-N2-(3-nitrophenyl)py-
2.2. Biology
rimidine-2,4-diamine:
A
mixture
of
2,5-dichloro-N-(2-(iso-
propylsulfonyl)phenyl)pyrimidin-4-amine (3.5 g, 10 mmol), 3-
nitroaniline (1.6 g, 12 mmol) and isopropyl alcohol 40 ml were added
to a 250 m three-necked round bottom flask. The solution was heated to
85 ◦C for 8 h and then cooled to room temperature. The precipitate was
filtered, washed with water, and then purified by column chromatog-
raphy (silica gel) to give target product (3.5 g, 79.5% yield) as a yellow
solid. ESI-MS: m/z = 447.89 [M + H].
2.2.1. Reagents
AZD9291 was purchased from MedChemExpress (MCE, NJ, USA),
Gefitinib was purchased from J&K Scientific Ltd (Beijing, China), MTT
was obtained from Sigma-Aldrich (St. Louis, MO, USA). The primary
antibodies against EGFR, phosphor-EGFR, ERK, phosphor-ERK, PARP
were purchased from Cell Signaling Technology (Danvers, MA, USA);
antibodies against Ki67 were purchased from Santa Cruz Biotechnology
(Santa Cruz, CA, USA). The Annexin V-FITC Assay kit, Reactive Oxygen
Assay Kit, Crystal Violet Staining Solution and N-Acetylcysteine (NAC)
were purchased from Beyotime Institute of Biotechnology (Shanghai,
China).
N2-(3-aminophenyl)-5-chloro-N4-(2-(isopropylsulfonyl)phenyl)py-
rimidine-2,4-diamine:5-chloro-N4-(2-(isopropylsulfonyl)phenyl)-N2-(3-
nitrophenyl)pyrimidine-2,4-diamine (3.0 g, 6.7 mmol) was dissolved in
methanol 60 ml, Pd/C 0.3 g was added, and then reaction with H2. The
reaction mixture was stirred at room temperature for 6 h. The Pd/C was
filtered, washed with methanol, the filtrate was dried and obtained
product (2.6 g, 92.8% yield) as a yellow solid. ESI-MS: m/z = 417.91 [M
+ H].
2.2.2. Molecular docking
Crystal structure of EGFR (PDB ID: 6LUB) and inhibitors were both
pretreated by Discovery Studio 3.5. All docking runs were utilizing
LigandFit Dock protocol of Discovery Studio 3.5. The image files are
generated by the Accelrys DS visualizer 4.0 systems.
Compound XHL 11:
A mixture of N2-(3-aminophenyl)-5-chloro-N4-(2-(isopropylsulfonyl)
phenyl)pyrimidi-ne-2,4-diamine (2.4 g, 5.7 mmol), acryloyl chloride
(0.5 g, 6.2 mmol) and dichloromethane 20 ml were added to a 100 ml
three-necked round bottom flask. The reaction mixture was stirred at
room temperature for 2 h, and then dried and purified by column
chromatography (silica gel) to give target product (2.0 g, 75% yield) as a
light white solid. ESI-MS: m/z = 471.11 [M + H]. 1H NMR (400 MHz,
DMSO‑d6): δ (ppm):
2.2.3. Cell culture
Human NSCLC cell lines H1975 and A431 were obtained from
American Type Culture Collection (Manassas, VA), which were cultured
in RPMI1640 medium (Gibco, Grand Island, NY, USA). PC9 cell line
were purchased from Jiangsu Meimian industrial Co., Ltd (Jiangsu,
China), which were cultured in DMEM medium (Gibco, Grand Island,
NY, USA). All cultured mediums were supplemented with 10% fetal
bovine serum (FBS, Gibco) and 1% solution of antibiotics (Hyclone,
Logan, UT, USA) at 37 ◦C in an incubator with 5% CO2.
1.17 (s, 3H), 1.18 (s, 3H), 3.43–3.47 (m, J = 2 Hz, 1H), 5.73–5.72 (d,
J = 2 Hz, 1H), 5.76–5.75 (d, J = 2 Hz, 1H), 6.46–6.25 (t, J = 3 Hz, 1H),
7.22–7.20 (d, J = 2 Hz, 1H), 7.35–7.33 (m, J = 0.5 Hz, 3H), 7.81 (d, J =
0.2 Hz, 1H), 7.82 (d, J = 0.2 Hz, 1H), 7.94 (s, 1H), 8.30 (s, 1H),
8.70–8.68 (d, J = 2 Hz, 1H), 9.55 (s, 1H), 9.59 (s, 1H), 10.07 (s, 1H). 13
C
2.2.4. Kinase enzymatic activity assay
NMR (101 MHz, DMSO‑d6): δ (ppm): 15.34, 55.46, 105.51, 111.94,
114.17, 116.01, 123.98, 124.16, 124.55, 127.23, 129.10, 131.43,
132.50, 135.37, 138.53, 139.62, 140.82, 155.30, 155.69, 158.22,
163.56.
The Z′-Lyte Kinase Assay Kit, WT and mutated EGFR kinase enzyme
were purchased from Invitrogen. Kinase enzymatic activity assay was
performed in accordance with the instructions of the manufacturer. In
brief, prepare test compounds at four times the expected concentrations
HPLC purity 98.67% (0–3 min, A: 30% methanol (0.1% trifluoro-
acetic acid), B:70% water (0.1% trifluoroacetic acid); 4–15 min, A: 95%
methanol (0.1% trifluoroacetic acid), B:5% water (0.1% trifluoroacetic
acid); 16–18 min, A: 30% methanol (0.1% trifluoroacetic acid), B:70%
water (0.1% trifluoroacetic acid) (Fig. S1A).
in the 10 μl Kinase Reactions. The compound, ATP solution and kinase/
peptide mixture were mixed and incubated at the room temperature for
1 h. After the mixture of the development solution, the assay plate was
incubated at room temperature for 1 h. At last, stop reagent was added to
the plate. The activity was measured with a microplate reader (Molec-
ular Devices).
Compound XHL 11a: N-(4-((5-chloro-4-((2-(isopropylsulfonyl)
2