O. R. Wauchope et al. / Bioorg. Med. Chem. 20 (2012) 3009–3015
3013
4.1.1.3. 30,50-(1,1,3,3-Tetraisopropyldisiloxane-1,3-diyl) [N7-iso-
4.1.1.7.
ethyl)-1-(4,5-diiodoimidazol-3-yl)-b-
(13). To a suspension of NaH (95%, 0.82 g, 32.4 mmol) in
3’-(p-Methoxybenzlyoxy)-5’-(p-methoxybenzyloxym-
butyryl-7-aminoimidazo[40,50:4,5]thieno[3,2-d]pyrimidin-3-yl-
D
-2’-deoxyribofuranose
7-one]-2,3,5-b-
D
-deoxyribofuranose (9).
Under N2,
8
(300 mg, 0.38 mmol) was suspended in 10 mL anhydrous toluene
and AIBN (28 mg, 0.17 mmol) added, followed by n-Bu3SnH
(1.25 mL, 2.07 mmol). The reaction mixture was refluxed for 6 h,
and the solvent was evaporated under vacuum to give a yellow syr-
up. The crude syrup was purified via chromatography eluting with
hexanes/EtOAc (2:1) to afford 9 as a colorless oil. Yield: 72 mg, 30%.
anhydrous THF (20 mL) at 0 °C was added a solution of 12
(5.65 g, 12.96 mmol) in anhydrous THF (20 mL) dropwise over a
period of 10 min. The resulting mixture was stirred at rt for 3 h,
at which point tetrabutylammonium iodide (957 mg, 2.59 mmol)
was added, followed by dropwise addition of p-methoxybenzyl
chloride (5.2 mL, 38.9 mmol). The mixture was further stirred at
rt for an additional 18 h. The reaction was filtered over celite and
repeatedly washed with CH2Cl2. The organic layers were combined
and reduced under vacuum to give a yellow syrup. Column chro-
matography eluting with hexane/EtOAc (3:2) gave 13 as thick oil.
Yield: 5.6 g, 64%.1H NMR (acetone-d6, 400 MHz): d 1.94 (m, 1H),
2.50–2.72 (m, 2H), 2.80 (s, 2H), 3.76 (dd, 3.2 Hz, 10.56 Hz, 2H),
3.77 (s, 6H), 4.45 (m, 1H), 4.47 (m, 1H), 5.94 (d, 6.40 Hz, 1H),
6.85 (m, 4H), 7.20 (m, 4H), 8.00 (s, 1H); 13C NMR (acetone-d6,
100 MHz) d 39.7, 55.3, 69.5, 71.4, 73.3, 78.6, 84.4, 90.0, 113.9,
114.0, 129.3, 129.4, 129.5, 129.6, 139.7, 159.4. HRMS (ESI): calcd
for C24H27I2N2O5 [M+H]+ 677.0015, found 677.0016.
1H NMR (CDCl3)
d 1.05–1.22 (m, 34H), 2.65–2.74 (m, 3H),
2.75–2.84 (m, 1 H), 3.92–3.94 (m, 1H), 4.05–4.12 (m, 1H), 4.66–
4.72 (m, 1H), 6.39–6.40 (m, 1H), 8.34 (s, 1H), 12.06 (s, 1H); 13C
NMR (CDCl3) d 12.6, 13.1, 13.2, 13.5, 16.9, 17.0, 17.3, 17.4, 17.5,
17.6, 19.1, 36.7, 41.2, 61.5, 69.1, 85.0, 85.6, 148.3, 157.3, 178.5.
HRMS (ESI): calcd for C28H46N5O6SSi2 [M+H]+ 636.2707, found
636.2705.
4.1.1.4. 1-[(5-Aminoimidazo[40,50:4,5]thieno[3,2-d]pyrimidin-3-
yl-7-one)]-b-
D
-20-deoxyribofuranose (5).
To a solution of 9
(72 mg, 0.113 mmol) in 5 ml of anhydrous THF was added TBAF
(1 M in THF, 0.226 ml, 0.226 mmol). The mixture was stirred at rt
until TLC analysis indicated the disappearance of the starting mate-
rial. The THF was removed under vacuum and a solution of meth-
anolic ammonia was added. This mixture was warmed to 40 °C and
stirred for 18 h. The solvent was removed and the product 5 was
purified by column chromatography eluting with EtOAc/acetone/
EtOH/H2O (4:1:1:1) to give a solid. Yield: 22 mg, 60%; mp 136–
138 °C. 1H NMR (DMSO-d6) d 3.64 (s, 1H), 3.75 (dd, 1H), 3.77 (dd,
1H), 3.87 (dd, 1H), 4.10–4.16 (m, 2H), 4.40 (s, 1H), 6.52 (t, 4.5 Hz,
1H), 7.93 (s, 1H), 9.56 (s, 1H), 10.20 (s, 1H); 13C NMR (DMSO-d6)
d 62.2, 70.7, 77.0, 88.6, 89.7, 108.9, 131.7, 150.6, 151.9, 160.6.
4.1.1.8.
ethyl)-1-[(5-iodo-4-carbaldehyde) imidazol-3-yl]-b-
ribofuranose (14). EtMgBr (1.6 mL, 3.0 M in Et2O,
3’-(p-Methoxybenzlyoxy)-5’-(p-methoxybenzyloxym-
D-2’-deoxy-
3.84 mmol) was added to a stirred solution of the starting material
(2.6 g, 3.84 mmol) in anhydrous THF (20 mL) under N2 at 0 °C. The
mixture was then stirred at this temperature for 15 min. Anhy-
drous DMF (1.6 mL, 4.81 mmol) was added, and the mixture was
further stirred for 20 min at 0 °C. The solvent was removed under
reduced pressure. Saturated NH4Cl solution (100 mL) was added
and the mixture extracted with CH2Cl2 (3 ꢃ 50 mL). The organic
extracts were combined, washed with brine (2 ꢃ 20 mL), and dried
over MgSO4. The solvent was removed under reduced pressure to
give 14 as a pale brown syrup which was used in the next step
without further purification. 1H NMR (CDCl3, 400 MHz): d 2.15
(m, 1H), 2.68 (ddd, 3.20 Hz, 6.4 Hz, 13.72 Hz, 1H), 3.53 (m, 1H),
3.71 (dd, 3.2 Hz, 10.56 Hz, 1H), 3.79 (s, 6H), 4.20 (m, 2H), 4.39 (q,
11.44 Hz, 2H), 4.45 (q, 11.92 Hz, 2H), 6.58 (t, 5.04 Hz, 1H), 6.86
(d, 6.44 Hz, 2H), 6.87 (d, 6.44 Hz, 2H), 7.19 (d, 8.64 Hz, 4H), 8.61
(s, 1H), 9.66 (s, 1H); 13C NMR (CDCl3, 100 MHz) d 40.4, 55.3, 68.7,
71.5, 73.2, 77.1, 84.6, 87.9, 114.0, 114.1, 129.4, 129.5, 129.6,
142.2, 159.4, 180.7. HRMS (ESI): calcd for C25H28IN2O6 [M+H]+
579.0992, found 579.0995.
HR-FAB m/z calcd for
C
12H14N5O4S [M+H]+ 324.0767, found
324.0765.
4.1.1.5. 1-[2’-Deoxy-3’,5’-di-O-(4-toluoyl)-b-
D-ribofuranose-1-
yl]-4,5-diiodoimidazole (11)30
.
To a solution of 4,5-diiodo-
imidazole (35.5 g, 111.2 mmol) in anhydrous CH3CN (200 mL) at
0 °C was added NaH (95%, 2.8 g, 111.2 mmol) portion wise. After
the mixture was stirred for 30 min at rt, 10 (32 g, 101.1 mmol)
was added portion wise at rt over a period of 1 h. After stirring
at the same temperature for 18 h the reaction mixture was filtered
over celite and washed with EtOAc (3 ꢃ 150 mL). The organic layer
was concentrated under reduced pressure. The product was iso-
lated by flash chromatography on silica gel using hexane/EtOAc
(3:1) to give 11 as a pale yellow syrup. Yield: 57 g, 84%. 1H NMR
(CDCl3, 400 MHz): d 2.39 (s, 3H), 2.42 (s, 3H), 2.54 (ddd, 6.40 Hz,
7.80 Hz, 14.20 Hz, 1H), 2.80 (ddd, 2.32 Hz, 5.96 Hz, 14.24 Hz, 1H),
4.60 (m, 1H), 4.64 (d, 3.64 Hz, 2H), 5.63 (dt, 2.76 Hz, 6.4 Hz, 1H),
6.06 (dd, 5.48 Hz, 7.76 Hz, 1H), 7.22 (d, 8.24 Hz, 2H), 7.27 (d,
8.24 Hz, 2H), 7.84 (d, 8.24 Hz, 2H), 7.85 (s, 1H), 7.93 (d, 8.24 Hz,
2H);13C NMR (CDCl3, 100 MHz) d 21.81, 21.87, 39.8, 63.8, 74.6,
79.8, 83.2, 89.5, 97.2, 126.3, 126.5, 129.4, 129.5, 129.6, 129.9,
138.9, 144.4, 144.7, 165.9, 166.2. HRMS (ESI): calcd for
4.1.1.9.
ethyl)-1-[(5-iodo-4-carbaldehydeoxime) imidazol-3-yl]-b-
deoxyribofuranose (15). To NaHCO3 (2.9 g, 34.6 mmol) in
3’-(p-Methoxybenzlyoxy)-5’-(p-methoxybenzyloxym-
D
-2’-
H2O (15 mL) was carefully added hydroxylamine hydrochloride
(1.97 g, 28.3 mmol), after which a solution of crude aldehyde 14
(2.22 g, 3.84 mmol) in THF/EtOH (1:3, 16 mL) was added dropwise.
To the resulting turbid solution was added THF until the mixture
turned homogeneous. The reaction mixture was then stirred at rt
overnight. The solvent was removed under reduced pressure; the
residue was treated with H2O (10 mL) and the mixture extracted
with CH2Cl2 (3 ꢃ 75 mL). The organic extracts were combined,
washed with brine (10 mL), and dried over Na2SO4. The solvent
was removed under reduced pressure to afford 15 as a pale yellow
syrup which was used directly without further purification. Yield:
1.8 g, 79%.1H NMR (CDCl3, 400 MHz): d 2.15 (dt, 5.92 Hz, 13.72 Hz,
1H), 2.56 (ddd, 4.92 Hz, 5.96 Hz, 13.98 Hz, 1H), 3.50 (dd, 3.20 Hz,
10.52 Hz, 1H), 3.67 (dd, 2.76 Hz, 10.56 Hz, 1H), 3.78 (s, 6H), 4.18
(m, 2H), 4.36 (q, 11.44 Hz, 2H), 4.44 (q, 11.92 Hz, 2H), 5.23 (s,
1H), 6.83 (d, 8.72 Hz, 2H), 6.87 (d, 8.68 Hz, 2H), 7.15 (d, 8.72 Hz,
2H), 7.19 (d, 8.34 Hz, 2H), 8.05 (s, 1H), 8.17 (s, 1H); 13C NMR
(CDCl3, 100 MHz) d 40.3, 55.3, 68.9, 71.5, 73.2, 77.6, 84.4, 88.0,
90.1, 113.9, 114.0, 125.0, 129.4, 129.5, 129.6, 139.4, 141.3, 142.8.
C
24H23I2N2O5 (M+H)+ 672.9696, found 672.9693.
4.1.1.6. 1-(2’-Deoxy-b-
D-ribofuranose-1-yl)-4,5-diiodoimidazole
(12)30
.
To a solution of 11 (20.34 g, 30.3 mmol), in anhydrous
MeOH (200 mL) was added NaOMe (3.38 g, 60.5 mmol) was added
and the resulting solution was stirred for 4 h at rt. Then the solvent
was evaporated and the product 12 was isolated as a white solid by
flash chromatography on silica gel eluting with EtOAc/MeOH (9:1).
Yield: 8.2 g, 87%; mp 58 °C–60 °C. 1H NMR (CD3OD, 400 MHz): d
2.42 (m, 2H), 3.75 (m, 2H), 3.95 (m, 1H), 4.42 (m, 1H), 6.02 (t,
6.40 Hz, 1H), 8.20 (s, 1H).13C NMR (CD3OD, 100 MHz): d 41.3,
61.3, 70.5, 88.0, 89.6, 94.5, 140.0. HRMS (ESI): calcd for
C8H11I2N2O3 [M+H]+ 436.8859, found 436.8856.