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(14) Lipid II (1a or 1b, 40 μM) was incubated with E. coli PBP1A or
PBP1B (400 nM) in 50 mM HEPES (4-(2-hydroxyethyl)-1-
piperazine-ethanesulfonic acid), 10 mM CaCl2, 20% DMSO, pH =
7.5 (10 μL total volume) for 20 min at 25 °C in the presence or
absence of penicillin G (1 kU/mL). Reaction was quenched at 95 °C
for 5 min and then treated with mutanolysin (1U for 1.5 h and then
1U for an additional 1.5 h at 37 °C) and sodium borohydride (10 μL,
10 mg/mL, 30 min). Phosphoric acid (20% v/v, 1.2 μL) was added to
adjust pH to ∼4. The mixture was lyophilized, redissolved in 10 μL
water, and subjected to LC/MS analysis (ESI-MS, positive mode,
Waters SymmetryShield RP18 column, 5 μm, 3.9×150 mm).
Fragments were separated with water (0.1% formic acid) for 5 min
followed by a gradient of 0−20% acetonirile (0.1% formic acid)/water
(0.1% formic acid) over 40 min at 0.5 mL/min. Molecular ions
corresponding to expected disaccharide fragments were extracted from
the chromatogram. See SI for more details.
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