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N. Singh et al. / European Journal of Medicinal Chemistry 44 (2009) 1705–1709
6. Experimental
(m, 6H, ArH), 3.89 (s, 12H, OCH3), 2.71 (m, 4H, CH2), 2.00 (m, 4H,
CH2). 13C NMR (50 MHz, CDCl3):
198.1, 150.6, 149.2, 140.0, 135.9,
d
6.1. Chemistry
129.4, 122.9, 113.4, 111.4, 56.0, 29.1 and 28.6. Anal. Calcd for
C25H28O5: C, 73.51; H, 6.91%. Found: C, 73.49; H, 6.93%.
Commercially available reagent grade chemicals were used as
received. All reactions were followed by TLC on E. Merck Kieselgel
60 F254, with detection by UV light and/or by spraying a 20% KMnO4
aq. solution. Column chromatography was performed on silica gel
(60–120 mesh, E. Merck). IR spectra were recorded as thin films or
in chloroform solution with a Perkin–Elmer Spectrum RX-1 (4000–
450 cmꢁ1) spectrophotometer. 1H and 13C NMR spectra were
recorded on a Brucker DRX-300 in CDCl3. Chemical shift values are
reported in ppm relative to SiMe4 as internal reference, unless
otherwise stated; s (singlet), d (doublet), t (triplet), m (multiplet); J
in hertz. FAB mass spectra were performed using a mass spec-
trometer Jeol SX-102 and ESI mass spectra with Quattro II (Micro-
mass). Elemental analyses were performed on a Perkin–Elmer 2400
II elemental analyzer.
6.1.1.6. 2,5-(EE)-Bis-(3,4-dimethoxy-benzylidene)-cyclopentanone
(14). IR (KBr): nmax cmꢁ1 3020, 1730, 1595; MS (FAB): 367 [M þ H]þ.
1H NMR (200 MHz, CDCl3):
d 7.50 (s, 2H, olefinic protons), 7.18–6.89
(m, 6H, ArH), 3.92 (s, 12H, OCH3), 3.09 (m, 4H, CH2). 13C NMR
(50 MHz, CDCl3): 196.0, 150.6, 149.3, 135.6, 134.0, 129.4, 124.9,
d
113.9, 111.5, 56.2, and 26.8. Anal. Calcd for C25H28O5: C, 76.61; H,
6.36%. Found: C, 76.61; H, 6.39%.
6.1.2. General experimental procedure for the preparation of
bis(benzylidene)-cycloalkanols
a, -
a0
A
solution of a,a
0-(EE)-bis(substituted-benzylidene)-cyclo-
alkanones (1 mmol) and ethanol (5 mL) was stirred at 0 ꢂC for
10 min. NaBH4 (1 equivalent) was slowly added and stirred at
30 ꢂC till the disappearance of starting material (TLC). The reaction
mixture was brought to 0 ꢂC and excess of NaBH4 was quenched by
saturated aq. solution of NH4Cl and solid so-obtained was filtered.
The solid cake was washed with ethanol and the combined filtrate
was evaporated under reduced pressure to give a crude mass. The
latter was dissolved in ethylacetate, organic layer was washed
with water, dried (anhy. Na2SO4) and concentrated in vacuum to
give a gummy mass. The latter was chromatographed over SiO2
using a gradient of hexane:EtOAc as eluent to afford the pure
products.
6.1.1. General experimental procedure for the preparation of a, -
a0
(EE)-bis(substituted-benzylidene)-cycloalkanones
To a stirring solution of the cycloalkanone (1 mmol) and
aromatic aldehyde (2 mmol) in minimum amount of ethanol, solid
KOH (5 mol%) was added. The reaction mixture was stirred at
ambient temperature till the disappearance of the starting mate-
rials (TLC). The solid separated was filtered and washed with water
and dried. The product, so-obtained, was crystallized with ethanol
to give the desired compounds in good yields.
6.1.1.1. 2,6-(EE)-Bis-furan-2-yl-methylene-cyclohexanone
(1). IR
6.1.2.1. 2,6-Bis-(4-bromobenzylidene)-cyclohexanol (16). IR (KBr):
nmax cmꢁ1 3021, 1724, 1596; MS (FAB): 417 [M ꢁ OH]þ. 1H NMR
(KBr): nmax cmꢁ1 3452, 1777, 1593; MS (FAB): 255 [M þ H]þ. 1H NMR
(300 MHz, CDCl3):
d
7.56–7.53 (d, J ¼ 7.1 Hz, 4H, olefinic protons and
(200 MHz, CDCl3): d 7.74–6.54 (m, 10H, olefinic protons and ArH),
ArH), 6.66 (d, J ¼ 3.18 Hz, 2H, ArH), 6.51 (dd, J ¼ 1.68 and 1.56 Hz,
4.64 (s, 1H, CHOH), 2.79–2.73 (m, 1H, CH), 2.40–2.33 (m, 4H, CH2),
1.61 (m, 2H, CH2). Anal. Calcd for C20H18O1Br2: C, 55.33; H, 4.18%.
Found: C, 55.30; H, 4.20%.
2H, ArH), 3.05–2.93 (m, 4H, CH2), 1.93–1.88 (m, 2H, CH2). 13C NMR
(50 MHz, CDCl3): d 188.4, 153.2, 144.5, 133.2, 123.6, 116.1, 112.5, 31.0,
30.1, 28.4 and 22.1. Anal. Calcd for C16H14O3: C, 75.57; H, 5.55%.
Found: C, 75.54; H, 5.58%.
6.1.2.2. 2,6-Bis-(4-nitro-benzylidene)-cyclohexanol (17). IR (KBr):
nmax cmꢁ1 3213, 1656 and 1513; MS (FAB): 366.9 [M þ H]þ. 1H NMR
6.1.1.2. 2,7-(EE)-Bis-(4-bromobenzylidene)-cycloheptanone (6). IR
(KBr): nmax cmꢁ1 3449,1673,1606; MS (FAB): 447 [M þ H]þ. 1H NMR
(200 MHz, CDCl3): d 8.21–8.16 (m, 4H, ArH), 7.37–7.33 (m, 6H,
olefinic protons and ArH), 4.25 (s, 1H, CHOH), 2.79–2.72 (m, 1H,
CH), 2.07–1.99 (m, 4H, CH2), 1.67–1.58 (m, 2H, CH2). Anal. Calcd for
C20H18N2O: C, 65.57; H, 4.95%. Found: C, 65.53; H, 4.99%.
(300 MHz, CDCl3):
d 7.61–7.11 (m, 10H, olefinic protons and ArH),
2.73–2.67 (m, 4H, CH2), 1.98–1.81 (m, 4H, CH2). 13C NMR (50 MHz,
CDCl3): 204.0, 142.0, 134.6, 134.3, 131.7, 131.6, 130.9, 43.3, 31.3,
d
29.9, 28.7, 28.0, 27.7 and 25.4. Anal. Calcd for C21H18O1Br2: C, 56.53;
H, 4.07%. Found: C, 56.54; H, 4.09%.
7. Biological activity
6.1.1.3. 2,7-(EE)-Bis-(4-chlorobenzylidene)-cycloheptanone (11). IR
(KBr): nmax cmꢁ1 3021, 1731, 1603; MS (FAB): 343 [M þ H]þ. 1H NMR
7.1. Activity against M. tuberculosis H37Ra strain
(200 MHz, CDCl3):
d 7.40–7.19 (m, 10H, olefinic protons and ArH),
2.65 (m, 4H, CH2),1.97–1.95 (m, 4H, CH2). 13C NMR (50 MHz, CDCl3):
198.1, 142.1, 134.9, 134.6, 131.0, 129.1, 129.0, 43.6, 31.7, 29.1, 28.8
All of the synthesized compounds were evaluated for their
efficacy against M. tuberculosis H37Ra at active concentration
d
and 25.7. Anal. Calcd for C21H18O1Cl2: C, 70.60; H, 5.08%. Found: C,
70.59; H, 5.10%.
ranging from 50 mg/mL to MIC using two-fold dilutions in the initial
screen. Log phase culture of M. tuberculosis H37Ra is diluted so as to
give final OD550 nm of 0.05 in Sauton’s medium. In 96-well white
6.1.1.4. 2,7-(EE)-Bis-(4-methoxybenzylidene)-cycloheptanone
plates 190
sulfoxide (DMSO) solution of test compounds is dispensed into 96-
well plates so as to make final test concentration of 25 g/mL (5
test compound is dispensed into 10 L of DMSO). Then the plate is
incubated at 37 ꢂC/5% CO2 for 5 days. On 5th day 15
L Alamar Blue
mL of culture is dispensed in each well. A dimethyl
(12). IR (KBr): nmax cmꢁ1 3018, 1731, 1603; MS (FAB): 335
[M þ H]þ. 1H NMR (200 MHz, CDCl3):
d
7.45–7.26 (m, 6H, olefinic
m
mg
protons and ArH), 6.93–6.87 (m, 4H, ArH), 3.81 (s, 6H, OCH3), 2.70
m
(m, 4H, CH2), 1.97 (m, 4H, CH2). 13C NMR (50 MHz, CDCl3):
d
199.7,
m
160.0, 140.0, 135.8, 131.6, 129.0, 114.3, 55.5, 30.2, 28.8, 28.4 and
25.7. Anal. Calcd for C23H24O3: C, 82.63; H, 7.18%. Found: C, 82.68;
H, 7.09%.
solution is added to each well of the plate. The plate is again
incubated overnight at 37 ꢂC/5% CO2 incubator. The fluorescence is
read on BMG polar star with excitation frequency at 544 nm and
emission frequency at 590 nm. The compounds, which were found
to be active (>90% inhibition as compared with control) at this
concentration are then tested at 6 serial dilutions starting from 50
6.1.1.5. 2,7-(EE)-Bis-(3,4-dimethoxybenzylidene)-cycloheptanone
(13). IR (KBr): nmax cmꢁ1 3010, 1695, 1596; MS (FAB): 395 [M þ H]þ.
1H NMR (200 MHz, CDCl3):
d
7.29 (s, 2H, olefinic protons), 7.05–6.83
to 1.56 mg/mL.