C. Han et al. / European Journal of Medicinal Chemistry 77 (2014) 75e83
81
J ¼ 7.95 Hz), 8.21 (s, 1H, ArH), 10.78 (s, 1H, PhNHCO); 13C NMR
2.52 (t, 6H, 2 ꢃ NCH2CH2N, COCH2CH2N, J ¼ 4.02 Hz), 2.58 (t, 4H,
2 ꢃ NCH2CH2N, J ¼ 4.08 Hz), 2.72 (t, 2H, COCH2CH2N, J ¼ 5.7 Hz),
3.11 (t, 4H, 2 ꢃ NCH2CH2N, J ¼ 4.53 Hz), 3.52 (t, 4H, 2 ꢃ NCH2CH2N,
J ¼ 4.53 Hz), 3.82 (s, 3H, OCH3), 4.29 (q, 2H, COONCH2CH3, J ¼ 7.08
Hz), 6.22 (dd, 1H, ArH, J ¼ 7.77 Hz), 6.45 (s, 1H, ArH), 6.95 (d, 1H,
ArH, J ¼ 7.26 Hz), 7.30 (s, 1H, ArH), 7.40 (t, 2H, ArH, J ¼ 8.07 Hz), 7.62
(d, 2H, ArH, PhNH, J ¼ 7.44 Hz), 8.23 (s, 1H, ArH), 10.7 (s, 1H,
(75 MHz, DMSO-d6): d 169.06, 163.65, 158.26, 157.92, 152.11, 151.90,
148.24, 140.30, 129.68, 122.91, 119.60, 116.50, 116.17, 112.35, 106.45,
103.94, 99.90, 55.50, 54.30, 53.15, 50.37, 48.26, 45.26, 33.84, 22.86;
ESI-MS: m/z 566 [M þ H]þ; ESI-HRMS (m/z): [M þ H]þ calcd for
C
29H36ClN7O3, 566.2646; obsd 566.2644.
5.1.1.4. N-(3-((5-Chloro-2-((2-methoxy-4-(4-methylpiperazin-1-yl)
phenyl)amino)pyrimidin-4-yl)oxy)phenyl)-3-(piperidin-1-yl)prop-
anamide (12d). The title compound was obtained starting from 11d
and 1. As a yellow solid, 61% yield. mp 190e192 ꢀC. Analytical data
PhNHCO); 13C NMR (75 MHz, DMSO-d6):
d 170.25, 163.66, 158.22,
157.92, 154.51, 152.13, 151.10, 148.39, 140.41, 129.68, 122.56, 119.50,
116.32, 116.09, 112.32, 106.39, 103.92, 99.80, 60.63, 55.47, 54.61,
53.60, 52.12, 48.59, 45.73, 43.27, 34.09, 14.52; ESI-MS: m/z 653
[M þ H]þ; ESI-HRMS (m/z): [M þ H]þ calcd for C32H41ClN8O5,
653.2967; obsd 653.2969.
for 12d: 1H NMR (300 MHz, CDCl3):
d 1.54 (m, 2H, CH2), 1.73 (m, 4H,
2 ꢃ CH2), 2.42 (s, 3H, NCH3), 2.71 (m, 10H, 2 ꢃ NCH2CH2N,
COCH2CH2N, 2 ꢃ NCH2), 2.91 (m, 2H, COCH2CH2N), 3.16 (m, 4H,
2 ꢃ NCH2CH2N), 3.81 (s, 3H, OCH3), 6.22 (dd, 1H, ArH, J ¼ 6.96 Hz),
6.44 (s, 1H, ArH), 6.92 (d, 1H, ArH, J ¼ 7.59 Hz), 7.38 (m, 1H, ArH),
7.46 (s,1H, ArH), 7.57 (m, 3H, 2 ꢃ ArH, PhNH), 8.21 (s,1H, ArH),11.08
5.1.1.8. N-(3-((5-Chloro-2-((2-methoxy-4-(4-methylpiperazin-1-yl)
phenyl)amino)pyrimidin-4-yl)oxy)phenyl)-3-(4-(2-hydroxyethyl)
piperazin-1-yl)propanamide (12h). The title compound was ob-
tained starting from 11h and 1. As a yellow solid, 49% yield. mp 99e
(s, 1H, PhNHCO); 13C NMR (75 MHz, DMSO-d6):
d 169.98, 163.65,
158.23, 157.92, 152.13, 151.89, 148.40, 140.41, 129.68, 123.31, 119.57,
116.34, 116.07, 112.30, 106.42, 103.94, 99.86, 55.49, 54.44, 53.68,
53.25, 48.41, 45.47, 33.26, 24.78, 23.31; ESI-MS: m/z 580 [M þ H]þ;
ESI-HRMS (m/z): [M þ H]þ calcd for C30H38ClN7O3, 580.2803; obsd
580.2806.
101 ꢀC. Analytical data for 12h: 1H NMR (300 MHz, DMSO):
d 2.38
(s, 3H, NCH3), 2.51e2.66 (m, 16H, 6 ꢃ NCH2CH2N, COCH2CH2N), 3.15
(t, 2H, NCH2, J ¼ 3.87 Hz), 3.17 (brs, 4H, 2 ꢃ NCH2CH2N), 3.56 (brs,
2H, HOCH2), 3.74 (s, 3H, OCH3), 6.20 (brs, 1H, ArH), 6.38 (s, 1H, ArH),
6.93 (d, 1H, ArH, J ¼ 7.17 Hz), 7.26 (d, 1H, ArH, J ¼ 7.25 Hz), 7.38 (t,
1H, ArH, J ¼ 7.35 Hz), 7.47 (d, 1H, ArH, J ¼ 8.01 Hz), 7.58 (s, 1H, ArH),
8.10 (s, 1H, PhNH), 8.34 (s, 1H, ArH),10.35 (s, 1H, PhNHCO); 13C NMR
5.1.1.5. N-(3-((5-Chloro-2-((2-methoxy-4-(4-methylpiperazin-1-yl)
p h e n y l ) a m i n o ) p y r i m i d i n - 4 - y l ) o x y ) p h e n y l ) - 3 -
morpholinopropanamide (12e). The title compound was obtained
starting from 11e and 1. As a yellow solid, 64% yield. mp 103e
(75 MHz, DMSO-d6): d 170.97, 164.45, 159.00, 158.70, 152.89, 151.90,
148.86, 141.26, 130.42, 123.65, 120.48, 117.08, 116. 89, 113.10, 107. 29,
104.76, 100.73, 60.22, 58.32, 56.31, 54.94, 54.09, 53.22, 52.19, 48.89,
46.19, 34.65; ESI-MS: m/z 625 [M þ H]þ; ESI-HRMS (m/z): [M þ H]þ
calcd for C31H41ClN8O4, 625.3018; obsd 625.3020.
105 ꢀC. Analytical data for 12e: 1H NMR (300 MHz, CDCl3):
d
2.37 (s,
3H, NCH3), 2.53e2.60 (m, 10H, 2 ꢃ NCH2CH2N, COCH2CH2N,
NCH2CH2O), 2.71 (m, 2H, COCH2CH2N), 3.11 (m, 4H,
2
ꢃ
2 ꢃ NCH2CH2N), 3.72 (m, 4H, 2 ꢃ OCH2CH2N), 3.82 (s, 3H, OCH3),
6.21 (dd, 1H, ArH, J ¼ 6.96 Hz), 6.45 (s, 1H, ArH), 6.95 (d, 1H, ArH,
J ¼ 7.8 Hz), 7.33 (s, 1H, ArH), 7.41 (t, 2H, ArH, J ¼ 8.1 Hz), 7.63 (d, 2H,
5.1.1.9. 4-(2-(4-(3-((3-((5-Chloro-2-((2-methoxy-4-(4-
methylpiperazin-1-yl)phenyl)amino)pyrimidin-4-yl)oxy)phenyl)
amino)-3-oxopropyl)piperazin-1-yl)ethoxy)-3-(phenylsulfonyl)-
1,2,5-oxadiazole 2-oxide (12i). The title compound was obtained
starting from 11i and 1. As a yellow solid, 60% yield. mp 132e134 ꢀC.
ArH, PhNH, J ¼ 7.11 Hz), 8.23 (s, 1H, ArH), 10.93 (s, 1H, PhNHCO); 13
C
NMR (75 MHz, DMSO-d6):
d 170.30, 163.66, 158.23, 157.91, 152.14,
151.90, 148.38, 140.43, 129.69, 122.91, 119.50, 116.32, 116.08, 112.32,
106.39, 103.93, 99.79, 66.12, 55.46, 54.60, 54.06, 53.00, 48.57, 45.72,
33.95; ESI-MS: m/z 582 [M þ H]þ; ESI-HRMS (m/z): [M þ H]þ calcd
for C29H36ClN7O4, 582.2596; obsd 582.2599.
Analytical data for 12i: 1H NMR (300 MHz, CDCl3):
d 2.35 (s, 3H,
NCH3), 2.57 (m, 14H, 6 ꢃ NCH2CH2N, COCH2CH2N), 2.69 (t, 2H,
COCH2CH2N, J ¼ 5.1 Hz), 2.82 (t, 2H, NCH2, J ¼ 5.28 Hz), 3.09 (brs,
4H, 2 ꢃ NCH2CH2N), 3.76 (s, 3H, OCH3), 4.51 (t, 2H, OCH2, J ¼ 5.22
Hz), 6.23 (d, 1H, ArH, J ¼ 6.54 Hz), 6.45 (s, 1H, ArH), 6.94 (d, 1H, ArH,
J ¼ 7.95 Hz), 7.31(s, 1H, ArH), 7.40 (t, 2H, ArH, J ¼ 8.16 Hz), 7.60 (t,
2H, ArH, J ¼ 7.41 Hz), 7.67 (d, 1H, ArH, J ¼ 6.93 Hz), 7.75 (t, 2H, ArH,
PhNH, J ¼ 7.41 Hz), 8.05 (d, 2H, ArH, J ¼ 7.32 Hz), 8.23 (s, 1H, ArH),
5.1.1.6. N-(3-((5-Chloro-2-((2-methoxy-4-(4-methylpiperazin-1-yl)
phenyl)amino)pyrimidin-4-yl)oxy)phenyl)-3-(4-methylpiperazin-1-
yl)propanamide (12f). The title compound was obtained starting
from 11f and 1. As a yellow solid, 55% yield. mp 173e175 ꢀC.
11.05 (s, 1H, PhNHCO); 13C NMR (75 MHz, DMSO-d6):
d 170.89,
Analytical data for 12f: 1H NMR (300 MHz, CDCl3):
d
2.29 (s, 3H,
164.15, 159.87, 159.21, 158.44, 152.65, 151.90, 140.94, 137.82, 136.57,
130.50, 130.21, 128.65, 127.82, 123.65, 119.99, 116.79, 116.53, 112.77,
106.86, 104.76, 100.32, 69.84, 56.06, 55.98, 55.12, 54.13, 53.28,
52.99, 49.08, 46.24, 34.69; ESI-MS: m/z 849 [M þ H]þ; ESI-HRMS
(m/z): [M þ H]þ calcd for C39H45ClN10O8S, 849.2909; obsd 849.2911.
NCH3), 2.38 (s, 3H, NCH3), 2.52 (t, 8H, 4 ꢃ NCH2CH2N, J ¼ 5.76 Hz),
2.61 (t, 6H, COCH2CH2N, 2 ꢃ NCH2CH2N, J ¼ 4.41 Hz), 2.71 (t, 2H,
COCH2CH2N, J ¼ 5.7 Hz), 3.13 (t, 4H, 2 ꢃ NCH2CH2N, J ¼ 4.62 Hz),
3.82 (s, 3H, OCH3), 6.23 (dd, 1H, ArH, J ¼ 7.92 Hz), 6.45 (s, 1H, ArH),
6.95 (d, 1H, ArH, J ¼ 8.07 Hz), 7.40 (t, 2H, ArH, J ¼ 8.16 Hz), 7.46 (s,
1H, ArH), 7.62 (d, 2H, ArH, PhNH, J ¼ 7.41 Hz), 8.23 (s,1H, ArH),11.06
(s, 1H, PhNHCO); 13C NMR (75 MHz, DMSO-d6): 170.33, 163.66,
158.23, 157.92, 152.14, 151.11, 148.31, 140.46, 129.67, 122.81, 119.55,
116.27, 116.05, 112.29, 106.05, 103.94, 99.84, 55.49, 54.52, 54.41,
53.49, 51.97, 48.49, 45.59, 45.27, 34.10; ESI-MS: m/z 595 [M þ H]þ;
ESI-HRMS (m/z): [M þ H]þ calcd for C30H39ClN8O3, 595.2912; obsd
595.2914.
5.2. In vitro stability and reactivity assays
Chemical stability was tested under physiological (0.01 M PBS,
pH 7.4), and alkaline (0.01 M borate buffer, pH 9.0) pH conditions, at
37 ꢀC. 1 mM Stock solutions of 12h and 1 were prepared in DMSO,
and each sample was incubated at a final concentration of 50 mM in
prewarmed buffered solutions (final concentration of DMSO: 5% v/
v). At the regular time points, solutions were sampled with same
volume of acetonitrile and immediately injected into the HPLC
system. For rat plasma stability assays, quickly-thawed rat plasma
was diluted to 50% (v/v) with 0.1 M PBS, pH 7.4. And then com-
pound stock solution in DMSO was added (final compound con-
5.1.1.7. Ethyl-4-(3-((3-((5-chloro-2-((2-methoxy-4-(4-
methylpiperazin-1-yl)phenyl)amino)pyrimidin-4-yl)oxy)phenyl)
amino)-3-oxopropyl)piperazine-1-carboxylate (12g). The title com-
pound was obtained starting from 11g and 1. As a yellow solid, 59%
yield. mp 98e100 ꢀC. Analytical data for 12g: 1H NMR (300 MHz,
centration: 50
mM, DMSO concentration: 5% v/v) and maintained at
CDCl3):
d
1.27 (t, 3H, COONCH2CH3, J ¼ 7.11 Hz), 2.36 (s, 3H, NCH3),
37 ꢀC. At specific time, two volumes of acetonitrile were added and