COMMUNICATION
DOI: 10.1002/asia.201402389
Aliphatic Amine Discrimination by Pentafluorophenyl Dibromo BODIPY**
Adiki Raja Sekhar, Masood Ayoub Kaloo, and Jeyaraman Sankar*[a]
Abstract: Two new fluorescent BODIPY dyes have been de-
signed and synthesized. They dyes differ in their meso sub-
stituents, which have different electronic properties. Their
selective reactivity towards an Ar-SN2 reaction has been ex-
plored as a potential basis for colorimetric and fluorescent
discrimination of primary, secondary and tertiary aliphatic
amines. This dual-mode, instantaneous recognition event is
unprecedented.
Molecular recognition provides an effective and promising
approach fulfilling most of the above requirements. It af-
fords fast and convenient read-out signals in the form of
color and fluorescence.[7] However, owing to the range of
sizes, conformations, and shapes of amines, besides their
high polarity, it is really challenging to design a molecular
scaffold providing aliphatic amine discrimination and analy-
sis in both aqueous and organic media.[8] So far, very few ef-
forts have been taken for the development of molecular sys-
tems for identification of aliphatic amines.[9] All these sys-
tems lack a clear-cut discrimination for various degrees of
aliphatic amines. The binding events are valid only in organ-
ic media and mostly suffer from time-delayed responses.
The recognitions display either a chromogenic or fluorogen-
ic output for a given interaction. Moreover, there are scarce
reports wherein any designed scaffold displays dual-mode
responses in the form of fluorescence and color through the
naked eye.[9] Our target was to achieve a molecular system
which exhibits fluorescence along with a chromogenic re-
sponse for amine discrimination. The BODIPY backbone
was chosen because of its excellent fluorescence and color,
and because it is structurally robust.
In our endeavor to develop the required molecular
system providing instantaneous aliphatic amine discrimina-
tion through visual diagnosis, a typical Ar-SN2 reaction of
BODIPYs at the 3- and 5-positions considered.[10] To ach-
ieve selective control over the nucleophilic substitutions
with various degrees of amines, we chose two new BODIPY
dyes (Ra and Rb), bearing electron-deficient and -rich moiet-
ies at meso-positions. The associated charge transfer (CT)
and electron transfer properties of the system are expected
to be strongly modulated through an ample variation.[11]
This can serve as a probable basis for discrimination with
fast and convenient signal transduction.
Aliphatic amines constitute one of the most important
and abundant classes of amines in nature.[1] Their impor-
tance can be felt by their widespread applications in textile,
cosmetic, chemical, medicinal, agricultural, plastic, leather,
metallurgical, pharmaceutical, and petroleum industries.[2]
They also play crucial roles in synthetic chemistry, biology,
and atmospheric sciences.[3] Apart from their vast diversity
and use in day-to-day life including modern technology, they
are usually associated with non-benignant, toxic, and carci-
nogenic properties, either in gaseous, aqueous, or non-aque-
ous media.[4] With these considerations along with character-
istic properties specified to various degrees of aliphatic
amines (primary, secondary, and tertiary), there should be
a potential need for direct discrimination of these amines in
a wide range of environments.
Over the past few decades, a number of methodologies
have been proposed for amine analysis, including gas chro-
matography (GC), liquid chromatography (LC), mass spec-
trometry (MS), capillary electrophoresis (CE), potentiome-
try, and ion chromatography (IC).[5] However, these tech-
niques involve tedious pre-concentration, which relies upon
extraction and separation, prior to their analysis. Besides
this disadvantage, current methodologies are expensive and
require a high level of expertise. Furthermore, none of these
techniques provide an in-situ amine discrimination and diag-
nosis with the naked eye, a quick and timely requirement in
clinical settings and in the food industry.[6]
The synthesis of Ra and Rb is outlined in Scheme 1. 5-pen-
tafluorophenyl-1,9-dibromodipyrromethene was obtained
through the reported procedure[12a] and further dissolved in
dry CH2Cl2 with subsequent addition of triethylamine and
BF3.Et2O at 08C. The reaction mixture was stirred at room
temperature for 2 h. The same strategy was utilized for the
synthesis of Rb, with 5-mesityl-1,9-dibromodipyrromethene
as starting material (see Scheme S1 and S2 in the Supporting
Information).[12b,c] The identities of compounds Ra and Rb
were confirmed by standard spectroscopic techniques in the
form of NMR (Figure S10 in the Supporting Information),
HR-LCMS (Figure S11 in the Supporting Information), and
single-crystal XRD (Figure 1).
[a] A. R. Sekhar, M. A. Kaloo, Prof. Dr. J. Sankar
Department of Chemistry
Indian Institute of Science Education and Research Bhopal
Indore bypass road, Bhouri, Bhopal, 462066 (India)
Fax : (+91)755-6692392
[**] BODIPY=boron dipyrromethene (4,4-difluoro-4-bora-3a,4a-diaza-s-
indacene).
Supporting information for this article is available on the WWW
Chem. Asian J. 2014, 9, 2422 – 2426
2422
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