Ligand Interactions with E-Selectin
J ournal of Medicinal Chemistry, 1996, Vol. 39, No. 7 1359
mass spectra and exact mass calculations were acquired on a
VG Fisons ZAB 2SE mass spectrometer.
2,4,6-tr i-O-a cetyl-â-D-ga la ctop yr a n osid e (7). A solution of
compound 6 (135 mg, 0.093 mmol), tri-O-benzyl-R/â-L-fucosyl
fluoride2 (283 mg, 0.65 mmol), 4 Å sieves (100 mg), tetra-
methylurea (122 µL, 1.02 mmol), and dichloroethane (10 mL)
was stirred for 4 h. Silver perchlorate (67 mg, 0.33 mmol)
followed by SnCl2 (61 mg, 0.33 mmol) was then added, and
the reaction mixture was stirred for 2 days. Ethyl acetate (300
mL) was then added and the suspension filtered. The filtrate
was washed with water (100 mL) and dried (MgSO4). Con-
centration and chromatography (silica, 8% acetone/ethyl ac-
etate) afforded 99 mg (57%) of white solid: Rf ) 0.39 (8%
acetone/ethyl acetate); 1H NMR (300 MHz, CDCl3) δ 8.03 (s, 1
H, H-1 naphthalene), 7.74 (d, J ) 7 Hz, 1 H, aromatic), 7.68
(d, J ) 7 Hz, 1 H, aromatic), 7.47 (m, 2 H, aromatic), 7.37-
7.11 (m, 16 H, aromatic), 6.98 (d, J ) 7 Hz, 1 H, aromatic),
6.35 (d, J ) 6.4 Hz, 1 H, NH), 5.57-5.35 (m, 3 H), 5.12-5.03
(m, 3 H), 4.97-4.45 (m, 8 H), 4.32-4.25 (m, 2 H), 4.14-3.72
(m, 22 H), 3.81 (s, 3 H, OMe), 3.71-3.60 (m, 2 H), 3.48-3.43
(m, 1 H), 3.25 (m, 1 H), 2.55 (dd, J ) 4.5, 12.4 Hz, 1 H, H-3eq
SA), 2.24 (s, 3 H, OAc), 2.22 (s, 3 H, OAc), 2.16 (s, 3 H, OAc),
2.13 (s, 3 H, OAc), 2.11 (s, 3 H, OAc), 2.09 (s, 3 H, OAc), 2.08
(s, 3 H, OAc), 2.06 (s, 3 H, OAc), 2.05 (s, 3 H, OAc), 2.02 (s, 3
H, OAc), 2.00 (s, 3 H, OAc), 1.85 (s, 3 H, NHAc), 1.68 (dd, J )
12.4, 12.4 Hz, 1 H, H-3ax SA), 1.18 (d, J ) 6.5 Hz, 3 H, H-6
Fuc), 1.08 (t, 3 H, Me). Anal. (C92H112N2O39‚2H2O) Calcd: C,
57.97; H, 6.12; N, 1.47. Found: C, 57.89; H, 5.98; N, 1.37.
Eth yl (Sod iu m 5-a ceta m id o-3,5-d id eoxy-r-D-glycer o-D-
ga la cto-2-n on u lop yr on osylon a t e)-(2,3)-O-(â-D-ga la ct o-
p yr a n osyl)-(1,4)-O-(r-L-fu cop yr a n osyl)-(1,3)-O-[2-(2-n a p h -
t h a m i d o )-2-d e o x y -â-D-g lu c o p y r a n o s y l]-(1,3)-O -â-D-
ga la ctop yr a n osid e (1). Compound 7 (14 mg, 7.49 µmol) was
dissolved in ethanol (5 mL) and degassed under vacuum.
Cyclohexene (50 µL) followed by 5% Pd/BaSO4 (30 mg) was
then added and suspension heated at 80 °C for 18 h. The
reaction mixture was filtered, concentrated, and chromato-
graphed (silica, hexane/ethyl acetate/ethanol, 2/2/1) to afford
9 mg (75%) of a white solid: Rf ) 0.28 (silica, hexane/ethyl
Eth yl (Meth yl 5-a ceta m id o-3,5-d id eoxy-4,7,8,9-tetr a -O-
a cet yl-r-D-glycer o-D-ga la cto-2-n on u lop yr on osylon a t e)-
(2,3)-O-(2,4,6-tr i-O-a cetyl-â-D-ga la ctop yr a n osyl)-(1,4)-O-
(6-O-a cetyl-2-a m in o-2-d eoxy-â-D-glu cop yr a n osyl)-(1,3)-O-
2,4,6-t r i-O-a cet yl-â-D-ga la ct op yr a n osid e (5). Tetrakis-
(triphenylphosphine)palladium (1.29 g, 1.12 mmol) was added
to a solution of polymethylsiloxane (2.98 mL, 8.95 mmol), ethyl
(methyl 5-acetamido-3,5-dideoxy-4,7,8,9-tetra-O-acetyl-R-D-
glycero-D-galacto-2-nonulopyronosylonate)-(2,3)-O-(2,4,6-tri-O-
acetyl-â-D-galactopyranosyl)-(1,4)-O-(3,6-di-O-acetyl-2-(allyl-
oxycarbamoyl)-2-deoxy-â-D-glucopyranosyl-(1,3)-O-2,4,6-tri-O-
acetyl-â-D-galactopyranoside7 (4) (30 g, 22.37 mmol), and THF
(250 mL). The solution was stirred overnight and diluted with
ethyl acetate (1.2 L). The solution was washed with water
(400 mL) and brine (400 mL), and the combined aqueous layers
were extracted again with ethyl acetate (2 × 250 mL). The
combined organic layers were dried (Na2SO4), concentrated,
and chromatographed (silica, 20% acetone/ethyl acetate) to
yield 19.3 g (68%) of a yellow solid: Rf ) 0.31 (silica, 20%
1
acetone/ethyl acetate); H NMR (300 MHz, CDCl3) δ 5.47 (m,
1 H), 5.42 (d, J ) 2.6 Hz, 1 H), 5.38 (d, J ) 3.0 Hz, 1 H), 5.06-
5.01 (m, 2 H), 4.95-4.84 (m, 3 H), 4.66 (d, J ) 8.1 Hz, 1 H,
â-anomer), 4.63 (d, J ) 12.4 Hz, 1 H), 4.50 (dd, J ) 3.3, 10.1
Hz, 1 H), 4.41-4.34 (m, 3 H), 4.15-3.93 (m, 7 H), 3.90-3.80
(m, 4 H), 3.83 (s, 3 H, OMe), 3.77-3.51 (m, 5 H), 2.56 (dd, J )
4.4, 12.7 Hz, 1 H, H-3eq SA), 2.21 (s, 3 H, OAc), 2.14 (s, 3 H,
OAc), 2.11 (s, 3 H, OAc), 2.07 (s, 6 H, OAc), 2.05 (s, 9 H, OAc),
2.03 (s, 3 H, OAc), 1.99 (s, 6 H, OAc), 1.84 (s, 3 H, NHAc),
1.67 (dd, J ) 12.4, 12.4 Hz, 1 H, H-3ax SA), 1.17 (t, J ) 7.0 Hz,
3 H, Me).
A solution of the above compound (19.2 g, 14.33 mmol),
acetic acid (847 µL, 14.79 mmol), methanol (1.26 L), and water
(312 mL) was heated to 55 °C for 24 h. The mixture was
concentrated and chromatographed (silica, ethyl acetate/ether/
acetone, 6/1/3) to afford 13.54 g (72%) of a yellow solid: Rf )
1
1
acetate/ethanol, 2/2/1); H NMR (300 MHz, CDCl3) δ 8.35 (s,
0.30 (silica, 20% acetone/ethyl acetate); H NMR (300 MHz,
1 H, H-1 naphthalene), 7.94 (d, J ) 7.1 Hz, 1 H, aromatic),
7.86 (s, 2 H, aromatic), 7.84 (d, J ) 10.2 Hz, 1 H, aromatic),
7.54 (m, 2 H, aromatic), 6.94 (bd, J ) 7.2 Hz, 1 H, NH), 5.55-
5.51 (m, 1 H), 5.45-5.41 (m, 2 H), 5.17-5.07 (m, 4 H), 4.96-
4.85 (m, 3 H), 4.74 (m, 2 H), 4.57 (m, 2 H), 4.38-4.33 (m, 3
H), 4.30-3.99 (m, 6 H), 3.95-3.71 (m, 9 H), 3.84 (s, 3 H, OMe),
3.66-3.59 (m, 4 H), 3.50 (m, 1 H), 2.58 (dd, J ) 4.4, 12.4 Hz,
1 H, H-3eq SA), 2.24 (s, 3 H, OAc), 2.17 (s, 3 H, OAc), 2.13 (s,
3 H, OAc), 2.11 (s, 3 H, OAc), 2.08 (s, 3 H, OAc), 2.07 (s, 3 H,
OAc), 2.04 (s, 6 H, OAc), 2.03 (s, 6 H, OAc), 2.00 (s, 3 H, OAc),
1.86 (s, 3 H, NHAc), 1.70 (dd, J ) 12.4, 12.4 Hz, 1 H, H-3ax
SA), 1.29 (d, J ) 6.6 Hz, 3 H, H-6 Fuc), 1.12 (t, 3 H, Me). Anal.
(C71H94N2O39) Calcd: C, 53.31; H, 5.92; N, 1.75. Found: C,
53.57; H, 6.30; N, 1.72.
This compound (1.34 g, 0.839 mmol) was then dissolved in
MeOH (30 mL), and a solution of 20% NaOMe in MeOH (1.0
mL) was added. The solution was stirred for 18 h and water
(5 mL) added. After 24 h, the solution pH was adjusted to 7.0
with acetic acid and the solution concentrated. Chromatog-
raphy (Bakerbond C-18, water then 10% MeOH in water)
afforded 0.92 g (95%) of a white solid after lyophilization: Rf
) 0.52 (1 M NH4OAc/2-propanol, 1/3); 1H NMR (500 MHz, D2O)
δ 8.38 (s, 1H, H-1 naphth), 8.10-7.99 (m, 3 H, H-4, 5 and 8
naphth), 7.81 (dd, J ) 1.6, 8.5 Hz, 1 H, H-3 naphth), 7.72-
7.63 (m, 2 H, H-6 and 7 naphth), 5.19 (d, J ) 4.0 Hz, 1 H, H-1
Fuc), 4.96 (d, J ) 8.4 Hz, 1 H, H-1 GlcN), 4.84 (m, 1 H, H-5
Fuc), 4.57 (d, J ) 7.9 Hz, 1 H, H-1 Gal), 4.32 (d, J ) 8.0 Hz,
1 H, H-1, Gal′), 4.26 (bt, 1 H, H-2 GlcN), 4.17 (d, J ) 3.3 Hz,
1 H, H-4, Gal′), 4.12-4.02 (m, 4 H, H-3 and 4 GlcN, H-3 Gal,
H-6′ GlcN), 3.96-3.84 (m, 7 H), 3.78-3.54 (m, 14 H), 3.48 (dd,
J ) 2.1, 9.2 Hz, 1 H, H-2 Gal′), 2.76 (dd, J ) 4.6, 12.4 Hz, 1 H,
H-3 SA), 2.03 (s, 3 H, NHAc SA), 1.78 (dd, J ) 12.2, 12.2 Hz,
1 H, H-3 SA), 1.17 (d, J ) 6.6 Hz, 3 H, H-6 Fuc), 1.13 (dd, J )
7.9, 7.9 Hz, 3 H, CH2CH3); 13C NMR (120 MHz, D2O) see Table
1. Anal. (C48H69N2O28Na‚6H2O) Calcd: C, 46.00; H, 6.51; N,
2.23. Found: C, 45.97; H, 6.47; N, 2.23.
CDCl3) δ 5.53-5.49 (bm, 1 H), 5.41-5.37 (m, 2 H), 5.16 (dd, J
) 8.1, 10.0 Hz, 1 H), 5.10-4.96 (m, 2 H), 4.95-4.84 (m, 2 H),
4.67-4.49 (m, 3H), 4.42-4.24 (m, 3 H), 4.21-3.42 (m, 16 H),
3.84 (s, 3 H, OMe), 2.70 (bs, 1 H, OH), 2.56 (dd, J ) 4.4, 12.4
Hz, 1 H, H-3eq SA), 2.25 (s, 3 H, OAc), 2.16 (s, 3 H, OAc), 2.10
(s, 6 H, OAc), 2.08 (s, 6 H, OAc), 2.06 (s, 6 H, OAc), 2.05 (s, 6
H, OAc), 2.00 (s, 3 H, OAc), 1.85 (s, 3 H, NHAc), 1.67 (dd, J )
12.4, 12.4 Hz, 1 H, H-3ax SA), 1.20 (t, 3 H, Me).
Eth yl (Meth yl 5-a ceta m id o-3,5-d id eoxy-4,7,8,9-tetr a -O-
a cet yl-r-D-glycer o-D-ga la cto-2-n on u lop yr on osylon a t e)-
(2,3)-O-(2,4,6-tr i-O-a cetyl-â-D-ga la ctop yr a n osyl)-(1,4)-O-
[6-O -a c e t y l-2-(2-n a p h t h a m i d o )-2-d e o x y -â-D -g lu c o -
p yr a n osyl]-(1,3)-O-2,4,6-t r i-O-a cet yl-â-D-ga la ct op yr a n o-
sid e (6). The 2-naphthoyl chloride (1.28 g, 6.72 mmol) was
added to a suspension of compound 5 (5.81 g, 4.48 mmol) and
sodium bicarbonate (3.01 g, 35.8 mmol) in CH2Cl2 (80 mL).
The mixture was stirred overnight and filtered. The filtrate
was washed with saturated NaHCO3 (10 mL) and dried (Na2-
SO4). Concentration and chromatography (silica, 35% acetone/
CH2Cl2) afforded 5.03 g (77%) of a white solid: Rf ) 0.45 (10%
acetone/ethyl acetate); 1H NMR (300 MHz, CDCl3) δ 8.35 (s, 1
H, H-1 naphthalene), 7.88 (m, 4 H, aromatic), 7.57 (m, 2 H,
aromatic), 6.58 (d, J ) 5.3 Hz, 1 H, NH), 5.53 (m, 1 H), 5.44
(d, J ) 2.9 Hz, 1 H, H-4 Gal), 5.39-5.23 (m, 3 H), 5.17-5.01
(m, 3 H), 4.89 (d, J ) 3 Hz, 1 H), 4.68 (d, J ) 8 Hz, 1 H, H-1
Gal), 4.57 (dd, J ) 3, 7 Hz, 1 H), 4.42-3.28 (m, 19 H), 3.81 (s,
3 H, OMe), 3.25 (q, J ) 6 Hz, 1 H, CH2), 2.57 (dd, J ) 4.3,
12.5 Hz, 1 H, H-3eq SA), 2.27 (s, 3 H, OAc), 2.15 (s, 3 H, OAc),
2.12 (s, 3 H, OAc), 2.08 (s, 6 H, OAc), 2.07 (s, 6 H, OAc), 2.03
(s, 3 H, OAc), 1.99 (s, 3 H, OAc), 1.92 (s, 3 H, OAc), 1.84 (s, 3
H, NHAc), 1.68 (dd, J ) 12.4, 12.4 Hz, 1 H, H-3ax SA), 1.12 (t,
J ) 6 Hz, 3 H, Me). Anal. (C65H84N2O35‚2.5H2O) Calcd: C,
52.10; H, 5.98; N, 1.86. Found: C, 52.18; H, 5.81; N, 1.75.
Eth yl (Meth yl 5-a ceta m id o-3,5-d id eoxy-4,7,8,9-tetr a -O-
a cet yl-r-D-glycer o-D-ga la cto-2-n on u lop yr on osylon a t e)-
(2,3)-O-(2,4,6-tr i-O-a cetyl-â-D-ga la ctoyp yr a n osyl)-(1,4)-O-
(2,3,4-tr i-O-ben zyl-r-L-fu cop yr a n osyl)-(1,3)-O-[6-O-a cetyl-
2-(2-n a p h th a m id o)-2-d eoxy-â-D-glu cop yr a n osyl]-(1,3)-O-
NMR Exp er im en ts. Proton and carbon NMR experiments
were conducted in D2O at 295 K using a Bruker AM-500 NMR