Chemical Libraries Containing Small Organic Molecules
J. Am. Chem. Soc., Vol. 118, No. 11, 1996 2571
N-((tert-Butyloxy)carbonyl)-N′-benzyliminodiacetic Acid Monoa-
mide: 417 mg (86%); H NMR (CD3OD, 300 MHz) δ 7.28 (m, 5H),
4.40 (br s, 2H), 4.04, 4.01, 3.98 and 3.93 (four s, total 4H), 1.40 and
1.32 (two s, total 9H); FABHRMS (NBA) m/e 323.1615 (M + H+,
C16H23N2O5 requires 323.1607).
4H), 6.32 (br s, 1H), 4.02, 3.95, 3.91 and 3.86 (four s, total 4H), 3.32
(m, 2H), 2.56 (m, 1H), 1.81-1.48 (m, 6H), 1.43 and 1.40 (two s, total
9H), 1.22 (m, 3H), 0.93 (t, J ) 7.3 Hz, 3H), 0.81 (t, J ) 7.2 Hz, 3H);
FABHRMS (NBA-CsI) m/e 552.1823 (M + Cs+, C23H37N3O4Cs
requires 552.1838).
1
N-((tert-Butyloxy)carbonyl)-N′-(n-butyl)iminodiacetic Acid Mono-
amide: 362 mg (84%); 1H NMR (CD3OD, 300 MHz) δ 4.04 and 4.00
(two s, total 2H), 3.92 and 3.89 (two s, total 2H), 3.22 (m, 2H), 1.55-
1.31 (m, 4H), 1.42 (s, 9H), 0.95-0.89 (m, 3H); FABHRMS (NBA)
m/e 289.1769 (M + H+, C13H25N2O5 requires 289.1763).
N-((tert-Butyloxy)carbonyl)-N′-cyclohexyliminodiacetic Acid Mono-
amide: 402 mg (85%); 1H NMR (CD3OD, 300 MHz) δ 4.03 and 3.99
(two s, total 2H), 3.90 and 3.87 (two s, total 2H), 3.68 (m, 1H), 1.90-
1.20 (m, 10H), 1.42 (s, 9H); FABHRMS (NBA) m/e 315.1928 (M +
H+, C15H27N2O5 requires 315.1920).
General Procedure for the Second Derivatization. Each of the
N-((tert-butyloxy)carbonyl)iminodiacetic acid monoamides was dis-
solved in anhydrous DMF (20 mL/mmol) and was divided into three
equal portions in three separate vials. Each solution was treated with
one of three amines (R2NH2, 1 equiv), diisopropylethylamine (2 equiv),
and PyBOP (1 equiv). The solution (20 mL DMF/mmol) was stirred
at 25 °C for 20 h. The mixture was poured into 10% aqueous HCl
and extracted with EtOAc. The organic phase was washed with 10%
aqueous HCl, saturated aqueous NaCl, 5% aqueous NaHCO3, and
saturated aqueous NaCl. The organic layer was dried (Na2SO4), filtered,
and concentrated in vacuo to yield the diamides (65-99%).
N-((tert-Butyloxy)carbonyl)-N′′-(4-sec-butylphenyl)-N′-cyclo-
hexyliminodiacetic Acid Diamide: 198 mg (99%); 1H NMR (CDCl3,
300 MHz) δ 9.60 (m, 1H), 7.63 (d, J ) 8.0 Hz, 2H), 7.15 (d, J ) 8.0
Hz, 2H), 6.61 and 5.80 (two m, total 1H), 4.03 and 3.95 (two s, total
2H), 3.90 and 3.84 (two s, total 2H), 2.57 (m, 1H), 2.0-1.55 (m, 8H),
1.45 and 1.41 (two s, total 9H), 1.22 (d, J ) 6.9 Hz, 3H), 0.82 (t, J )
7.2 Hz, 3H); FABHRMS (NBA) m/e 446.3005 (M + H+, C25H40N3O4
requires 446.3019).
N-((tert-Butyloxy)carbonyl)-N′-(n-butyl)-N′′-(3-methoxypropyl)-
iminodiacetic Acid Diamide: 75 mg (65%); H NMR (CD3OD, 300
MHz) δ 3.90 and 3.88 (two s, total 4H), 3.43 (m, 2H), 3.31 and 3.29
(two s, total 3H), 3.22 (m, 2H), 1.86-1.74 (m, 4H), 1.41 (s, 9H), 0.93
(m, 3H); FABHRMS (NBA-CsI) m/e 492.1461 (M + Cs+, C17H33N3O5-
Cs requires 492.1475).
1
N-((tert-Butyloxy)carbonyl)-N′-(n-butyl)-N′′-(2,2-diphenylethyl)-
iminodiacetic Acid Diamide: 155 mg (99%); 1H NMR (CD3OD, 300
MHz) δ 7.27-7.15 (m, 10H), 4.30 (t, J ) 7.7 Hz, 1H), 3.86 and 3.83
(two s, total 2H), 3.81 and 3.77 (two s, total 2H), 3.30 (m, 2H), 3.21
(t, 6.8 Hz, 2H), 1.56-1.42 (m, 2H), 1.37 and 1.30 (two s, total 9H),
0.96 and 0.95 (two t, J ) 7.2 Hz, total 3H): FABHRMS (NBA-CsI)
m/e 600.1821 (M + Cs+, C27H37N3O4Cs requires 600.1838).
General Procedure for the Third Derivatization. Each of the N′-
((tert-butyloxy)carbonyl)-N,N-disubstituted iminodiacetic acid diamides
was dissolved in 4 N HCl-dioxane (32 mL/mmol), and the mixture
was stirred at 25 °C for 45 min. the solvent was removed in vacuo,
and the residue was dissolved in anhydrous DMF (28 mL/mmol) and
was divided into three equal portions and placed in three separate vials.
The solution was treated with one of three carboxylic acids (R3CO2H,
1 equiv) followed by diisopropylethylamine (3 equiv) and PyBOP (1
equiv). The solution was stirred for 20 h at 25 °C. The mixture was
poured into 10% aqueous HCl and extracted with EtOAc. The organic
phase was washed with 10% aqueous HCl and extracted with EtOAc.
The organic phase was washed with 10% aqueous HCl, saturated
aqueous NaCl, 5% aqueous NaHCO3, and saturated aqueous NaCl. The
organic phase was dried (Na2SO4), filtered, and concentrated in vacuo
to yield the final products (16-100%).
N-(Benzylcarbonyl)-N′-cyclohexyl-N′′-(2,2-diphenylethyl)imino-
diacetic Acid Diamide: 47 mg (86%); 1H NMR (CDCl3, 300 MHz) δ
9.10 and 8.75 (two m, total 1H), 7.50-7.05 (m, 15H), 6.10 and 5.95
(two m, total 1H), 4.40 and 4.18 (two t, J ) 8.4 Hz, total 1H), 3.91
(m, 2H), 3.82 and 3.73 (two s, total 2H), 3.61 and 3.58 (two s, total
2H), 3.21 (br s, 2H), 1.93-1.14 (m, 10H); FABHRMS (NBA) m/e
512.2907 (M + H+, C32H38N3O3 requires 512.2913).
N-((tert-Butyloxy)carbonyl)-N′-cyclohexyl-N′′-(3-methoxypropyl)-
1
iminodiacetic Acid Diamide: 135 mg (88%); H NMR (CDCl3, 300
MHz) δ 7.98 (m, 1H), 6.99 and 6.82 (two m, total 1H), 3.84 and 3.79
(two s, total 4H), 3.47 (t, J ) 5.9 Hz, 2H), 3.43-3.39 (m, 2H), 3.34
(s, 3H), 1.92-1.15 (m, 10H), 1.43 (s, 9H); FABHRMS (NBA-CsI)
m/e 518.1647 (M + Cs+, C19H35N3O5Cs requires 518.1631).
N-Benzoyl-N′-cyclohexyl-N′′-(2,2-diphenylethyl)iminodiacetic Acid
Diamide: 37 mg (69%); 1H NMR (CDCl3, 300 MHz) δ 9.18 and 6.40
(two br s, total 1H), 8.35 and 6.05 (two m, total 1H), 7.38-7.21 (m,
15H), 4.48 and 4.22 (two t, J ) 8.4 Hz, total 1H), 3.99 (m, 2H), 3.89-
3.84 (m, 2H), 3.13 (m, 2H), 2.04-1.20 (m, 10H); FABHRMS (NBA)
m/e 498.2759 (M + H+, C31H36N3O3 requires 498.2756).
N-((tert-Butyloxy)carbonyl)-N′-cyclohexyl-N′′-(2,2-diphenylethyl)-
iminodiacetic Acid Diamide: 197 mg (82%); H NMR (CDCl3, 300
1
MHz) δ 7.90 and 6.85 (two t, total 1H), 7.78 and 6.78 (two d, total
1H), 7.26 (m, 10H), 4.26 (m, 1H), 3.95, 3.94, 3.93 and 3.91 (four s,
total 4H), 3.72 and 3.70 (two s, total 2H), 3.15 (m, 1H), 1.92-1.61
(m, 4H), 1.40 and 1.33 (two s, total 9H), 1.29-1.21 (m, 6H);
FABHRMS (NBA-CsI) m/e 626.2023 (M + Cs+, C29H39N3O4Cs
requires 626.1995).
N-(Ethylcarbonyl)-N′-cyclohexyl-N′′-(2,2-diphenylethyl)iminodi-
1
acetic Acid Diamide: 39 mg (81%); H NMR (CDCl3, 400 MHz) δ
9.27 and 6.05 (two t, total 1H), 8.80 and 5.87 (two d, J ) 7.3 Hz, total
1H), 7.37-7.15 (m, 10H), 4.38 and 4.16 (two t, J ) 8.4 Hz, total 1H),
3.89 and 3.84 (two s, total 2H), 3.76 and 3.62 (two s, total 2H), 3.15
(m, 2H), 2.25 (q, J ) 7.3 Hz, 2H), 1.95-1.07 (m, 10H), 0.88 (t, J )
7.4 Hz, 3H); FABHRMS (NBA) m/e 450.2749 (M + H+, C27H36N3O3
requires 450.2756).
N-(Benzylcarbonyl)-N′-benzyl-N′′-(3-methoxypropyl)iminodiace-
tic Acid Diamide: 28 mg (76%); 1H NMR (CDCl3, 300 MHz) δ 9.61
and 8.71 (two t, total 1H), 7.12-7.37 (m, 10H), 6.89 and 6.85 (two t,
total 1H), 4.43-4.40 (m, total 2H), 4.04 and 4.00 (two s, total 2H),
3.89 and 3.84 (two s, total 2H), 3.64 and 3.58 (two s, total 2H), 3.42
(t, J ) 6.7 Hz, 2H), 3.30 (s, 3H), 3.13 (t, J ) 3.5 Hz, 2H), 1.82-1.72
(m, 2H); FABHRMS (NBA) m/e 412.2231 (M + H+, C23H30N3O4
requires 412.2236).
N-Benzoyl-N′-benzyl-N′′-(3-methoxypropyl)iminodiacetic Acid
Diamide: 24 mg (67%); 1H NMR (CDCl3, 300 MHz) δ 9.35 and 8.46
(two br s, total 1H), 7.42-7.20 (m, 10H), 6.98 (br s, 1H), 4.49 (d, J )
5.7 Hz, 2H), 4.00 (m, 4H), 3.47-3.31 (m, 5H), 3.13 (m, 2H), 1.80 (m,
2H); FABHRMS (NBA) m/e 398.2077 (M + H+, C22H28N3O4 requires
398.2079).
N-(Ethylcarbonyl)-N′-benzyl-N′′-(3-methoxypropyl)iminodiace-
tic Acid Diamide: 15 mg (48%); 1H NMR (CDCl3, 300 MHz) δ 9.75
and 8.90 (two t, total 1H), 7.30-7.26 (m, 5H), 6.85 and 6.65 (two t,
total 1H), 4.47 and 4.46 (two d, J ) 17.8 Hz, 2H), 4.03 and 4.00 (two
N-((tert-Butyloxy)carbonyl)-N′-benzyl-N′′-(4-sec-butylphenyl)imi-
nodiacetic Acid Diamide: 180 mg (99%); 1H NMR (CDCl3, 300 MHz)
δ 9.43 (br s, 1H), 7.61 (d, J ) 8.3 Hz, 1H), 7.52 (d, J ) 8.0 Hz, 1H),
7.30 (br s, 5H), 7.13 (d, J ) 8.2 Hz, 2H), 6.60 (t, 1H), 4.52 and 4.50
(two s, total 2H), 4.01, 3.95 and 3.89 (three s, total 4H), 2.56 (m, 1H),
1.57 (m, 2H), 1.40 and 1.36 (two s, total 9H), 1.21 (d, J ) 6.8 Hz,
3H), 0.81 (t, J ) 7.4 Hz, 3H); FABHRMS (NBA-CsI) m/e 586.1662
(M + Cs+, C26H35N3O4Cs requires 586.1682).
N-((tert-Butyloxy)carbonyl)-N′-benzyl-N′′-(3-methoxypropyl)imi-
nodiacetic Acid Diamide: 141 mg (90%); 1H NMR (CDCl3, 300 MHz)
δ 8.82, 7.85, 7.58 and 6.90 (four br s, total 2H), 7.30 (m, 5H), 4.49
and 4.47 (two s, total 2H), 3.90 and 3.86 (two s, total 2H), 3.84 and
3.81 (two s, total 2H), 3.46 (t, J ) 5.8 Hz, 2H), 3.32 (s, 3H), 3.14 (m,
2H), 1.80 (m, 2H), 1.42 and 1.35 (two s, total 9H); FABHRMS (NBA-
CsI) m/e 526.1335 (M + Cs+, C20H31N3O5Cs requires 526.1318).
N-((tert-Butyloxy)carbonyl)-N′-benzyl-N′′-(2,2-diphenylethyl)imi-
nodiacetic Acid Diamide: 212 mg (99%); 1H NMR (CDCl3, 300 MHz)
δ 8.50, 7.78 and 6.50 (three br s, total 2H), 7.33-7.21 (m, 15H), 4.47
and 4.45 (two s, total 2H), 3.93-3.89 (m, 2H), 3.72-3.67 (m, 2H),
3.15 (m, 1H), 1.32 (s, 9H); FABHRMS (NBA-CsI) m/e 634.1664 (M
+ Cs+, C30H35N3O4Cs requires 634.1682).
N-((tert-Butyloxy)carbonyl)-N′-(n-butyl)-N′′-(4-sec-butylphenyl)-
1
iminodiacetic Acid Diamide: 137 mg (99%); H NMR (CDCl3, 300
MHz) δ 9.60 (br s, 1H), 7.61, 7.52, 7.13 (three d, J ) 8.2 Hz, total