Synthesis and antiproliferative activity of derivatives of the phyllanthusmin class of arylnaphthalene lignan lactones

Article abstract of DOI:10.1016/j.bmc.2018.03.033

A series of arylnaphthalene lignan lactones based on the structure of the phyllanthusmins, a class of potent natural products possessing diphyllin as the aglycone, has been synthesized and screened for activity against multiple cancer cell lines. SAR exploration was performed on both the carbohydrate and lactone moieties of this structural class. These studies have revealed the importance of functionalization of the carbohydrate hydroxy groups with both acetylated and methylated analogues showing increased potency relative to those with unsubstituted sugar moieties. In addition, the requirement for the presence and position of the C-ring lactone has been demonstrated through reduction and selective re-oxidation of the lactone ring. The most potent compound in this study displayed an IC₅₀ value of 18 nM in an HT-29 assay with several others ranging from 50 to 200 nM. In an effort to elucidate their potential mechanism(s) of action, the DNA topoisomerase IIa inhibitory activity of the most potent compounds was examined based on previous reports of structurally similar compounds, but does not appear to contribute significantly to their antiproliferative effects.

Full text of DOI:10.1016/j.bmc.2018.03.033

Accepted Manuscript
Synthesis and antiproliferative activity of derivatives of the phyllanthusmin
class of arylnaphthalene lignan lactones
John L. Woodard, Andrew C. Huntsman, Pratiq A. Patel, Hee-Byung Chai, Ragu
Kanagasabai, Soumendrakrishna Karmahapatra, Alexandria N. Young, Yulin
Ren, Malcolm S. Cole, Denisse Herrera, Jack C. Yalowich, A. Douglas
Kinghorn, Joanna E. Burdette, James R. Fuchs
PII:
S0968-0896(17)32459-8
https://doi.org/10.1016/j.bmc.2018.03.033
BMC 14271
DOI:
Reference:
Bioorganic & Medicinal Chemistry
To appear in:
Received Date:
Revised Date:
Accepted Date:
21 December 2017
14 March 2018
21 March 2018
Please cite this article as: Woodard, J.L., Huntsman, A.C., Patel, P.A., Chai, H-B., Kanagasabai, R., Karmahapatra,
S., Young, A.N., Ren, Y., Cole, M.S., Herrera, D., Yalowich, J.C., Kinghorn, A.D., Burdette, J.E., Fuchs, J.R.,
Synthesis and antiproliferative activity of derivatives of the phyllanthusmin class of arylnaphthalene lignan lactones,
Bioorganic & Medicinal Chemistry (2018), doi: https://doi.org/10.1016/j.bmc.2018.03.033
This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers
we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and
review of the resulting proof before it is published in its final form. Please note that during the production process
errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain.

Page 1 of 33
Synthesis and antiproliferative activity of derivatives of the
phyllanthusmin class of arylnaphthalene lignan lactones
John L. Woodard,†a Andrew C. Huntsman,†a Pratiq A. Patel,a Hee-Byung Chai,a Ragu Kanagasabai,b
Soumendrakrishna Karmahapatra,b Alexandria N. Young,c Yulin Ren,a Malcolm S. Cole,a Denisse Herrera,c
Jack C. Yalowich,b A. Douglas Kinghorn,a Joanna E. Burdette,c James R. Fuchs*a
a. Division of Medicinal Chemistry and Pharmacognosy, College of Pharmacy, The Ohio State University,
Columbus OH 43210. b. Division of Pharmacology, College of Pharmacy, The Ohio State University,
Columbus OH 43210. c. Department of Medicinal Chemistry and Pharmacognosy, College of Pharmacy,
University of Illinois-Chicago, Chicago IL 60612.
* Corresponding author at present address: 500 W. 12th Avenue, College of Pharmacy, The Ohio State
University, Columbus, OH 43210, United States.
E-mail address: fuchs.42@osu.edu
† These authors contributed equally.

Page 2 of 33
Graphical Abstract

Page 3 of 33
Abstract
A series of arylnaphthalene lignan lactones based on the structure of the phyllanthusmins, a class of
potent natural products possessing diphyllin as the aglycone, has been synthesized and screened for activity
against multiple cancer cell lines. SAR exploration was performed on both the carbohydrate and lactone
moieties of this structural class. These studies have revealed the importance of functionalization of the
carbohydrate hydroxy groups with both acetylated and methylated analogues showing increased potency
relative to those with unsubstituted sugar moieties. In addition, the requirement for the presence and position of
the C-ring lactone has been demonstrated through reduction and selective re-oxidation of the lactone ring. The
most potent compound in this study displayed an IC50 value of 18 nM in an HT-29 assay with several others
ranging from 50 to 200 nM. In an effort to elucidate their potential mechanism(s) of action, the DNA
topoisomerase IIa inhibitory activity of the most potent compounds was examined based on previous reports of
structurally similar compounds, but does not appear to contribute significantly to their antiproliferative effects.
1. Introduction
The genus Phyllanthus has historically been a rich source of natural products possessing diverse
chemical structures and biological activities.1 Building in part upon this diversity, a recent effort to identify
novel compounds with cytotoxic activity from Phyllanthus poilanei by Kinghorn and coworkers led to the
isolation of two new natural products, phyllanthusmins D and E (Fig. 1),2 along with the previously reported
phyllanthusmins A-C.3 The isolated phyllanthusmins displayed promising potent antiproliferative activity
against various cancer cell lines, with phyllanthusmin D displaying the most potent activity with an IC50 value
of 0.17 M against HT-29 colon carcinoma cells and a semisynthetic analogue, 2”-acetyl-phyllanthusmin D,
also exhibiting similarly potent activity in the same cell line (IC50 = 0.11 M).2

Page 4 of 33
Figure 1. Phyllanthusmins A-E along with structurally related arylnaphthalene lignan lactones (A) and aryletralin lignan
lactones (B).
From a structural perspective, the phyllanthusmins represent a subset of the arylnaphthalene lignan
lactone class of natural products (Fig. 1A). Phyllanthusmins B-E are diphyllin glycosides possessing substituted
arabinose units linked via a glycosidic bond to the C7 phenol of diphyllin, the aglycone portion of the molecule
and a natural product itself.4 Likewise, phyllanthusmin A is also built upon a diphyllin-like core, but possesses a
hydroxy group at the C4 position rather than a methoxy substituent and, more importantly, does not contain the
glycosidic linkage seen in other members of this group. When considering the promising activity of these
compounds, it is interesting to note that diphyllin has also been shown to display cytotoxic,5,6 antimicrobial,7
and antiviral8 activities. Other members of the arylnaphthalene lignan class and the closely related aryltetralin
lignan class of natural products have also garnered significant interest due to the range of biological activities
possessed by their constituents, including cytotoxic,9–13 antioxidant,14,15 antiviral,16–18 anti-inflammatory,19
cardioprotective,20,21 insecticidal,22 and neuroprotective23 properties. The relationship between the
arylnaphthalene and aryltetralin classes of compounds is of interest due to their deceptive structural similarities
as seen in Figure 1. The two classes differ, however, in the oxidation state of the B ring, imparting clear
conformational differences that potentially lead to different modes of action. Despite this fact, both the
aryltetralins, including etoposide and teniposide (Fig. 1B), and some arylnapthalenes like daurinol have been

Page 5 of 33
shown to possess inhibitory activity against the same biological target, DNA topoisomerase II, albeit via
different interactions with the enzyme as either topoisomerase poisons or catalytic inhibitors, respectively.24,25
In addition to mechanistic considerations, the development of etoposide and teniposide, two nearly identical
clinically approved aryltetralin drugs, also points to the importance of optimization of the glycosidic moiety in
these compounds as these drugs display unique pharmacological properties26 and an entirely different
mechanism of action than podophyllotoxin, the aglycone from which they are derived.27
Previous studies of several other structurally related arylnaphthalene compounds have also indicated the
critical importance of the glycosidic sugar moiety in mediating general antiproliferative activities within the
series of arylnaphthalene lignans.12,28,29 In addition to phyllanthusmins B-E,2 other diphyllin glycosides,
including tuberculatin5 and D11,29 have also demonstrated more potent in vitro activity than diphyllin, their
aglycone, in a variety of cancer cell lines. The impact of the glycosidic moiety can also be observed in the
relative, although highly varied, antiproliferative activities of related natural products containing an array of
substituted carbohydrate groups attached to diphyllin. The earliest examples of these are cleistanthins A30 and
B31 (as well as cleistanthin A methyl ether)11 which have been thoroughly investigated for their antiproliferative
properties as well as their inherent toxicities in rats.32–37 Acutissimalignan A, which possesses a functionalized
arabinose moiety analogous to the isolated phyllanthusmins, was also recently found to possess highly potent
activity against HT-29 cells following its isolation by the Kinghorn group with an IC50 value of 19 nM.38,39
Other diphyllin glycosides that have also been found to be cytotoxic towards various cancer cell lines include
patentiflorin A,9 procumbenoside A,5 and cleistanthoside A tetraacetate.11,40–43
Considering the potential influence of the carbohydrate group for antiproliferative activity, this moiety
was identified as a useful starting point for the exploration of the structure-activity relationships in the
phyllanthusmin class of natural products. Expanding on the structure activity relationship studies reported by
Shi et al and Zhao et al for this class of compounds,12,28 in this study we describe the synthesis of analogues
containing various mono- and disaccharide units and the modification of the C-ring lactone in the aglycone

Page 6 of 33
portion of the molecules. The library of arylnaphthalene lignan glycosides generated during these studies has
provided important structure-activity relationship (SAR) data across a series of cell lines previously not
investigated with this class of compounds, including HT-29 (colon), MDA-MB 435/231 (breast), and OVCAR3
(ovarian cancer), as well as insight into the role of DNA topoisomerase II as a target for their antiproliferative
activity.
2. Results and Discussion
Based on the relatively straightforward retrosynthetic disconnection of diphyllin from the carbohydrate moiety
via the glycosidic linkage, the synthesis of analogues of the phyllanthusmin class of natural products, like other
diphyllin glycosides, was predicated on the ability to efficiently produce diphyllin in sufficient quantities for
derivatization. Although numerous elegant recent approaches to the synthesis of similar arylnaphthalene core
ring systems have been reported, they are either not specifically amenable to the synthesis of diphyllin or are
potentially limited by scale-up cost.44–51 The route of Charlton and coworkers,52 however, has previously been
employed12,28,53–55 for the synthesis of diphyllin and related analogues based on the ease of access to the
requisite starting materials and the overall efficiency of the route. Employing only minor modifications to the
reported procedure, gram scale quantities of diphyllin (5) have been produced (Scheme 1). The most significant
modification to the reported procedure was made based on initial difficulties observed during the isolation and
purification of diphyllin following the final reduction of diester 4 using the reported sodium borohydride
reduction conditions. Despite early work that indicated the potential for over-reduction of the desired lactone
product in the presence of lithium aluminum hydride (LAH),56 there was literature precedent indicating that
LAH could be utilized under careful dropwise inverse addition44,57 or portion-wise addition55 conditions to
affect this type of transformation. In the present study, portion-wise addition of 4 equivalents of LAH cleanly
and efficiently resulted in the regioselective reduction of diester 4 within five minutes as observed by thin layer
chromatography. Upon workup, trituration of the crude product with methanol cleanly provided diphyllin. The

Page 7 of 33
overall yield of the five step sequence to prepare diphyllin ranged from 30–41% and required minimal
chromatographic purification over the course of the synthesis. This method, therefore, facilitated the preparation
of the aglycone in sufficient quantities for subsequent SAR studies.
Scheme 1. Synthesis of diphyllin glycoside analogues 6a-c possessing an arabinose ring.
With diphyllin in hand, a series of simple glycosyl bromides were prepared from the corresponding
carbohydrates for glycosylation of the free phenol of the aglycone. The brominated substrates were immediately
subjected to phase transfer glycosylation with diphyllin, following the same procedure implemented by Zhao
and coworkers.28 Utilizing this approach, the stereochemistry of the glycosidic linkage was established through
neighboring group participation of the adjacent acetyl group, necessitating the presence of a C2” equatorial
alcohol in all starting materials to ultimately achieve the desired stereochemical control in the glycosylation
reaction. For this reason, L-arabinose, D-xylose, D-glucose, D-galactose, D-arabinose, and lactose could be
effectively utilized as starting materials and were subjected to this sequence of reactions to provide
phyllanthusmin (PHY) analogues 6a, 7a, 8a, 9a, 10, and 11, respectively (Scheme 1 and Fig. 2). Once
introduced onto diphyllin, the carbohydrate substitution was then further manipulated. This was accomplished
via hydrolysis of the acetylated compounds 6a-9a to unmask the free hydroxy groups and generate compounds
6b-9b as illustrated in Scheme 1 for compound 6. Subsequently, the newly revealed alcohols in 6b and 7b were
also methylated in the presence of base to provide analogues 6c and 7c.

Page 8 of 33
Figure 2. Chemical structures of compounds 7-11.
During the methylation of compounds 6b and 7b to prepare compounds 6c and 7c (the natural product
cleistanthin A methyl ether)11, however, the formation of an additional minor byproduct was also observed in
each case. The minor “impurity,” although formed in only very small quantities (<2% yield), was isolated in the
xylose series and was determined to be the product of ring opening of the C-ring lactone, compound 12
(Scheme 2A). Presumably, this product is generated in the presence of trace amounts of methanol (or water)
through nucleophilic attack of the carbonyl and alkylation of the resulting primary alcohol.
This result, which indicates the potential instability of the lactone ring from a chemical and/or metabolic
perspective, prompted further derivatization of the C-ring to probe its significance in the antiproliferative
activity of these compounds. To this end, the ample supply of the precursor to diphyllin 4 facilitated generation
of diester 13, an analogue lacking the lactone ring, via phase-transfer glycosylation (Scheme 2B). Additionally,

Page 9 of 33
complete removal of the lactone carbonyl oxygen of 6a, leaving the tetrahydrofuran ring intact, was also
explored. In order to efficiently access the desired ether functionality, the C7 phenol of diphyllin (5) was first
protected as the silyl ether (Scheme 2C) and the lactone functionality was subsequently reduced utilizing a
method developed by Sakai and coworkers58 that proceeds via an InBr3/Et3SiH radical mediated pathway. With
the cyclic ether 14 in hand, synthesis of the desired analogue 17 was contingent on the deprotection of the silyl
ether and the glycosylation of the resulting phenol to introduce the peracetylated arabinose moiety. In practice,
this deprotection was readily accomplished using TBAF in THF to generate the free phenol 15, which was then
glycosylated to give 17. Interestingly, however, when the deprotection reaction was run using cesium carbonate
in DMF/H2O and left open to the air, in addition to the cleavage of the silyl ether, an unexpected oxidation also
regiospecifically took place at the C9 position, resulting in transposition of the lactone carbonyl and generation
of the C-ring type-I lactone 16 observed in other arylnaphthalene lignan lactone natural products including
justicidin C.59 The position of the lactone carbonyl in 16 was confirmed using a 1D Selective Gradient NOESY
NMR experiment (Supplementary Information). Similar transformations resulting in the regioselective
oxidation of arylnaphthalene systems have recently also been reported by Mondal et al.60 and Yamamoto et
al.,51 with the type-I lactone being produced preferentially in both cases. Glycosylation of the free phenol of 16,
led to formation of compound 18, containing the transposed carbonyl, but otherwise analogous to compound 6a.

Page 10 of 33
Scheme 2. Preparation of C-ring lactone analogues 12, 13, 17, and 18.
The antiproliferative activities of the synthesized analogues were first evaluated in colon carcinoma
(HT-29), breast (MDA-MB-435 and MDA-MB-231; see Supplementary Info.), and ovarian (OVCAR3) cancer
cell lines (Table 1). Structure-activity relationships were relatively consistent within both the HT-29 and MDA-
MB-435 cell lines. By comparison, however, the MDA-MB-231 cell line was less susceptible to this series of
compounds. The OVCAR3 cell line showed similar SAR trends to both HT-29 and MDA-MB-435, albeit with
several potentially interesting outliers. In particular, analogues 7c and 8a, which display exceptional potency in
HT-29 cells (0.018 and 0.040 M), show a significant decrease in potency (>400 fold) against the OVCAR3
cells (8.0 and >10 M). The observed discrepancies between cell lines, in combination with the higher potency
observed in OVCAR3 versus HT-29 for compounds 7b and 12, suggest selectivity for specific cell lines based
on the expression levels of potential cellular targets. Alternatively, this data could also point to the potential
existence of multiple cellular targets within the tested cell lines. With the target(s) unknown at this time, the
complete data set obtained for the test compounds against the HT-29 cell line has been utilized as the primary

Page 11 of 33
point of comparison and has been useful for drawing conclusions about structure-activity relationships within
this series.
Cmpd
6a
Carbohydrate
L-arabinose (-OAc)
L-arabinose (-OH)
L-arabinose (-OMe)
D-xylose (-OAc)
D-xylose (-OH)
HT-29
0.14
3.2
OVCAR3
0.29
4.8
6b
0.13
0.16
1.4
0.81
0.57
0.69
7.6
6c
7a
7b
D-xylose (-OMe)
D-glucose (-OAc)
D-glucose (-OH)
D-galactose (-OAc)
D-galactose (-OH)
D-arabinose (-OAc)
Lactose (-OAc)
0.018
0.043
4.8
7c
>10
8a
>10
8b
0.044
>10
0.046
2.0
0.36
>10
9a
9b
0.37
>10
10
11
D-xylose (-OMe)
L-arabinose (-OAc)
L-arabinose (-OAc)
L-arabinose (-OAc)
1.7
0.45
>10
12
>10
1.4
13
>10
17
0.47
0.011
15
>10
18
0.011
2.9
Taxol
Etoposide
Table 1. Phyllanthusmin analogues and corresponding antiproliferative data
in HT-29 and OVCAR3 cell lines expressed as IC50 values in M.
Against the HT-29 cells, the IC50 values for the acetylated diphyllin glycoside analogues 6a-9a, 10 and
11 ranged in potency from 0.05 – 2.0 M. Within this series, compounds containing a C5-hydroxymethyl
group were found to have increased potency over those lacking a substituent at this position (e.g.
glucosylpyranoside 8a and galactosylpyranoside 9a vs xylosylpyranoside 7a and arabonsylpyranoside 6a). It is
interesting to note that compound 10, possessing the D-arabinose group, displayed a slightly higher potency
against the HT-29 cells than 6a, the compound with the L-arabinose group found in the natural products.
Additionally, the disaccharide lactose analogue 11 resulted in the most significant loss in activity among the
acetylated analogues. These observations indicate that, while a variety of different monosaccharide-containing
diphyllin glycosides are well tolerated, certain disaccharide moieties may be too large to effectively elicit a
biological response.

Page 12 of 33
This series of synthesized analogues also allowed the relative substitution of the pendant hydroxy groups
to be assessed. Compared to the acetylated compounds 6a-9a, the corresponding free alcohol containing
compounds 6b–9b were much less active against the HT-29 cells. In fact, the glucose and galactose analogues
8b and 9b were found to be only weakly active or even inactive (defined in this study as having an IC50 of
greater than 10 M) in both the HT-29 and OVCAR3 cell lines. These results highlight the importance of the
substitution of the hydroxy groups on the sugar moieties in this series for increased antiproliferative activity. In
addition, the present findings parallel previous biological results obtained from the series of isolated
phyllanthusmins2 in which increased potency correlated with a greater relative degree of substitution on the
arabinose moiety. To support this argument, subsequent permethylation of these hydroxy groups resulted in
restoration or even improvement of the antiproliferative activities. Analogue 7c, the permethylated xylose
derivative, was not only the most potent analogue synthesized in this study (0.018 M against HT-29), but upon
comparison to 6c (0.13 M) revealed a potential preference for equatorial (vs axial) stereochemistry at C4’’. A
similar correlation has also been found with HCT116 cells in a study by Zhao et al.28
Investigation into the SAR of the C-ring lactone of the aglycone has also determined the importance of
this moiety as a part of the pharmacophore. The ring opened compounds 12 and 13 both showed a dramatic loss
in potency in the HT-29 cells in comparison to their lactone counterparts (7c and 6a). Similarly, removal of the
carbonyl moiety (compound 17) also reduced potency (in comparison to 6a). Transposition of the carbonyl in
compound 18 resulted in a compound with better potency than cyclic ether 17, but still showed a 3-fold loss as
compared to 6a. These results indicate that the lactone carbonyl is an important structural motif present in the
diphyllin core of the phyllanthusmins required for more potent biological activity potentially due to the
electronic contribution, the induced geometry for putative binding to the target site, or a combination of the two
effects.
Based on the structural similarity of the synthesized compounds to the aryltetralin etoposide and the
arynaphthalene daurinol, four of the most potent analogues in the tested cell lines (6a, 6c, 7c, and 8a) were

Page 13 of 33
selected for subsequent investigation of inhibitory activity against DNA topoisomerase IIα and for
antiproliferative activity in parental human leukemia K562 cells compared to an etoposide-resistant clonal cell
line, K/VP.5, with reduced levels of DNA topoisomerase II.61 These compounds comprise a useful cross-section
of the analogues, sampling a variety of glycone scaffolds and substitution, as represented by both peracetylated
and permethylated derivatives of the arabinose 6, xylose 7, and glucose 8 analogues.
Figure 3. DNA topoisomerase II mediated pBR322 DNA relaxation in the absence or presence of etoposide ,
diphyllin, or PHY analogue.
These compounds were first examined in an in vitro assay designed to look at the effects of purified
DNA topoisomerase IIα on cleavage of supercoiled pBR322 DNA. As reported previously for the natural
phyllanthusmins,2 the synthetic analogues did not induce DNA topoisomerase II-mediated DNA cleavage (data
not shown). However, using an assay to assess DNA topoisomerase II catalytic activity, inhibition of DNA
topoisomerase II mediated pBR322 DNA relaxation could be observed (Figure 3) for compounds 8a, 6a, and
7c at 50 and 100 µM. This activity was more pronounced than that of diphyllin itself, although the compounds
were not as potent as etoposide (100 µM). Compound 6c does not appear to show any activity in the DNA
relaxation assay and, therefore, suggests some structural specificity required for inhibition of DNA

Page 14 of 33
topoisomerase IIcatalytic activity. Based on their observed inhibitory activity against isolated enzyme, the
antiproliferative activity of these compounds was evaluated in etoposide sensitive K562 cells and in acquired
etoposide resistant K/VP.5 cells, which contain ~1/5 the level of DNA topoisomerase II compared to parental
K562 cells and which have been shown to be 30-fold resistant to etoposide in direct growth inhibition
assays.61,62 The antiproliferative activities observed for the four compounds in both cell lines were nearly
identical (Table 2), strongly suggesting that direct DNA topoisomerase II inhibition is not likely the primary
mechanism of action through which these compounds mediate their effects on cancer cells.
Relative
Compound
K562
K/VP.5
n
Resistancea
1.22
35.36
28.98
1
3
4
4
6
3
etoposide
0.72 ± 0.10 0.69 ± 0.05
0.85 ± 0.09 0.92 ± 0.13
1.26 ± 0.2 1.28 ± 0.44
0.47 ± 0.06 0.43 ± 0.09
2.38 ± 0.37 2.31 ± 0.35
0.96
1.08
1.02
0.91
0.97
8a
6a
6c
7c
diphyllin
Table 2. Antiproliferative data (IC50, M) for PHY analogues in etoposide sensitive K562 cells and isogenic etoposide
a
resistant K/VP.5 cells, where “n” is the number of replicate experiments performed on separate days. Relative resistance
is calculated by the ratio of IC50 values in K/VP.5 compared to K562 cells.
3. Conclusions
Members of the phyllanthusmin class of natural products represent promising lead compounds based on
their potent cytotoxic properties. This study has demonstrated that variation of the carbohydrate portion of
these compounds is well tolerated with regard to observed antiproliferative activities and establishes a
foundation for future studies within this class of compounds. The mechanism(s) of action of this class remains
to be determined, although evidence presented here and elsewhere suggests that DNA topoisomerase II

Page 15 of 33
activity is not a significant contributor.2 The selectivity observed for some of the compounds across the cell
lines tested suggests that specific analogues may affect multiple targets within the various cancer subtypes or
are dramatically affected by their relative expression levels within cells. The potential flexibility afforded by
the structural variation of the carbohydrate moiety may ultimately prove to be useful for the development of
novel agents with optimal physicochemical properties and could potentially be exploited to promote target
selectivity in future generations of analogues.
4. Experimentals
4.1. Chemistry
All reactions were performed at room temperature, under an argon atmosphere, with reagent grade
solvents unless otherwise stated. Commercially available chemicals were used without further purification.
When applicable, dry solvents (THF, DCM, and DMF) were obtained from an Innovative Technology PureSolv
system and oven-dried syringes were used to transfer air and moisture sensitive liquids. Reactions were
monitored by thin layer chromatography (TLC) using aluminum backed pre-coated silica gel plates (w/UV254,
200 µm) from Sorbtech, using UV light as the visualizing agent and ceric ammonium molybdate (CAM) and
heat as a developing agent. Flash column chromatography was carried out using Sorbtech 40-63 μm silica gel
with eluent ratios expressed in v/v. All 1H- and 13C-NMR spectra were recorded at 300 K on a Bruker AV300,
AVIII400, or DRX400 MHz NMR with tetramethylsilane as an internal standard. Chemical shifts () are
reported in parts per million (ppm) with multiplicities when applicable (s = singlet, d = doublet, t = triplet dd =
doublet of doublets, m = multiplet, etc.), and are calibrated using the residual undeuterated solvent peak
1
13
1
13
(CDCl3:  7.26 ppm H NMR, 77.16 ppm C NMR; acetone-d6:  2.05 ppm H NMR, 29.84 ppm C NMR;
13
DMSO-d6:  2.50 ppm 1H NMR, 39.52 ppm 13C NMR; CD3OD:  3.31 ppm 1H NMR, 49.00 ppm C NMR).
As previously described by Charlton et al.,51 the hindered rotation of arylnaphthalene lignans about the C1’–C7’
1
13
bond results in observation of “additional” peaks in several H and C NMR spectra, an effect that appears to

Page 16 of 33
be highly solvent dependent. High resolution electrospray ionization mass spectra (HRMS-ESI) were recorded
on a Thermo LTQ Orbitrap mass spectrometer. Melting points were recorded using a Thomas Hoover Melting
Point Capillary Apparatus. Infrared (IR) absorption spectra were recorded on Thermo-Nicolet 6700 FTIR. Prior
to biological testing, purity was determined using an ACE Excel 3 C18-PFP (150 x 4.6 mm) column on a
Shimadzu HPLC system (flow rate: 1 mL/min).
4.1.1. Preparation of diphyllin (5). Diphyllin was synthesized according to the method of Charlton and
coworkers,52 albeit with a slight modification to the last step. For the final reduction step, the diester 4 (5.86 g,
12.5 mmol) was dissolved in dry THF (250 mL) and lithium aluminum hydride (1.90 g, 50 mmol) was added
portion-wise at 0 C. The reaction mixture was allowed to warm to room temperature over a 5 minute period
prior to being cooled back to 0 C and quenched via the dropwise addition of deionized water. Once the
evolution of gas was no longer observed upon further addition of water, the pH of the mixture was brought to
~2 with the slow addition of 2M HCl. The resulting aqueous mixture was then extracted three times with
EtOAc. The combined organic layers were washed with brine, dried with sodium sulfate, and concentrated
under reduced pressure. Trituration of the resulting crude solid with methanol provided diphyllin (3.17 g, 67%)
as a pale yellow solid. The 1H and 13C spectral characteristics were identical to those previously published.52 1
H
NMR (400 MHz, Acetone-d6) δ 9.24 (br s, 1H), 7.69 (s, 1H), 7.09 (s, 1H), 6.96 (d, J = 7.9 Hz, 1H), 6.85 (d, J =
1.6 Hz, 1H), 6.80 (dd, J = 7.9, 1.7 Hz, 1H), 6.09 (d, J = 1.0 Hz, 1H), 6.08 (d, J = 1.0 Hz, 1H), 5.37 (s, 2H), 4.00
(s, 3H), 3.73 (s, 3H); 13C NMR (101 MHz, Acetone-d6) δ 170.27, 152.21, 151.35, 148.31, 148.05, 145.69,
131.70, 131.19, 130.24, 124.80, 124.53, 122.83, 119.99, 112.01, 108.59, 106.87, 102.09, 101.34, 66.99, 56.09,
55.74; HRMS-ESI calcd for C21H16O7 (M+Na)+ 403.07882, found 403.07855.
4.1.2. Synthesis of per-acetylated diphyllin glycosides:
4.1.2.1. General procedure for bromination/glycosylation. 7-O-(2”,3”,4”,6”-Tetra-O-acetyl--D-
glucopyranosyl) diphyllin (8a). To 1,2,3,4,6-penta-O-acetyl-D-glucopyranose (1.678 g, 4.30 mmol) dissolved in
DCM (10.75 mL) was added hydrogen bromide (33% in acetic acid, 2.97 mL) dropwise at 0 °C. The reaction

Page 17 of 33
mixture was then allowed to warm to room temperature and stir for an additional 4 h. The reaction was
quenched with water and the aqueous layer was extracted with DCM. The organic layers were combined and
washed with water, saturated aqueous NaHCO3, brine, and then dried with sodium sulfate and concentrated
under reduced pressure to afford a clear viscous oil that was immediately added to a biphasic mixture of
diphyllin (1.090 g, 2.87 mmol) and TBAB (0.933 g, 2.89 mmol) in CHCl3 (100 mL) and aqueous NaOH (0.1
M, 100 mL) at 40 °C. The mixture was maintained at 40 °C overnight. After cooling to room temperature, the
layers were separated and the aqueous layer was extracted three times with CHCl3. The combined organic
layers were washed with brine, dried with sodium sulfate, and concentrated under reduced pressure. Flash
chromatography (silica gel, 0.3% → 1% MeOH in CHCl3) afforded compound 8a (1.928 g, 95%) as a white
1
solid: H NMR (400 MHz, CDCl3)  7.52 (s, 1H), 7.07 (s, 1H), 6.96 (d, J = 7.8 Hz, 1H), 6.82 (br s, 1H), 6.79
(br d, J = 7.9 Hz, 1H), 6.09 (br s, 1H), 6.05 (br s, 1H), 5.56 – 5.48 (m, 2H), 5.40 (br d, J = 14.8, 1H), 5.33 (t, J =
9.5 Hz, 1H), 5.23 – 5.14 (m, 2H), 4.27 (dd, J = 12.4, 6.0 Hz, 1H), 4.14 (br d, J = 12.4 Hz, 1H), 4.06 (s, 3H),
13
3.80 (s, 3H), 3.79 – 3.75 (m, 1H), 2.11 (s, 3H), 2.062 (s, 3H), 2.057 (s, 3H), 2.04 (br s, 3H); C NMR (101
MHz, CDCl3)  170.50, 170.27, 169.52, 169.51, 169.45, 152.14, 150.58, 147.73, 147.71, 147.69, 144.13,
144.12, 136.53, 130.87, 128.22, 127.06, 127.05, 126.30, 126.28, 123.68, 123.63, 119.32, 110.75, 110.73,
108.37, 108.34, 106.31, 101.41, 101.00, 100.99, 100.60, 100.58, 72.69, 71.75, 68.26, 66.93, 62.03, 56.32, 55.98,
20.99, 20.70, 20.68; HRMS-ESI calcd for C35H34O16 (M+Na)+ 733.17391, found 733.17317.
4.1.2.2. 7-O-(2”,3”,4”-Tri-O-acetyl--L-arabinopyranosyl) diphyllin (6a). Starting from 1,2,3,4-tetra-O-acetyl-
L-arabinopyranose and following the general procedure for bromination/glycosylation, flash chromatography
(silica gel, 45% → 52% EtOAc in hexanes) afforded 6a (702 mg, 84%) as a white solid: [] -7.59(c 0.24,
CHCl3); 1H NMR (300 MHz, CDCl3)  7.54 (s, 1H), 7.08 (s, 1H), 6.96 (d, J = 7.8 Hz, 1H), 6.84 – 6.76 (m, 2H),
6.09 (br s, 1H), 6.05 (br s, 1H), 5.70 (dd, J = 9.5, 7.0 Hz, 1H), 5.48 (d, J = 14.8 Hz, 1H), 5.41 (br d, J = 14.8 Hz,
1H), 5.39 – 5.35 (m, 1H), 5.17 (dd, J = 9.5, 3.5 Hz, 1H), 5.09 (d, J = 7.0 Hz, 1H), 4.19 (dd, J = 13.0, 3.1 Hz,
13
1H), 4.09 (s, 3H), 3.80 (s, 3H), 3.72 (br d, J = 12.7 Hz, 1H), 2.22 (s, 3H), 2.11 (s, 3H), 2.08 (s, 3H); C NMR

Page 18 of 33
(101 MHz, CDCl3)  170.31, 170.17, 169.60, 169.55, 152.08, 150.50, 147.65, 144.28, 136.26, 130.85, 128.33,
127.31, 126.28, 123.66, 123.64, 119.41, 110.76, 108.30, 106.35, 101.48, 101.37, 100.61, 100.60, 70.26, 69.53,
67.41, 66.98, 64.09, 56.35, 55.95, 21.07, 21.04, 20.78; HRMS-ESI calcd for C32H30O14 (M+Na)+ 661.15278,
found 661.15218.
4.1.2.3. 7-O-(2”,3”,4”-Tri-O-acetyl--D-xylopyranosyl) diphyllin (7a). Starting from 1,2,3,4-tetra-O-acetyl-D-
xylopyranose and following the general procedure for bromination/glycosylation, flash chromatography (silica
gel, 45% → 55% EtOAc in hexanes) afforded 7a (511 mg, 87%) as a white solid: 1H NMR (400 MHz, CDCl3)
 7.49 (s, 1H), 7.04 (s, 1H), 6.91 (d, J = 7.7 Hz, 1H), 6.80 – 6.70 (m, 2H), 6.06 (s, 1H), 6.01 (s, 1H), 5.44 (dd, J
= 9.0, 7.3 Hz, 1H), 5.43 (d, J = 15.2 Hz), 5.38 (br d, J = 15.2 Hz, 1H), 5.30 (t, J = 8.9 Hz, 1H), 5.13 (d, J = 7.0
Hz, 1H), 5.11 (dd, J = 8.6, 5.1 Hz, 1H), 4.25 (dd, J = 11.8, 5.2 Hz, 1H), 4.05 (s, 3H), 3.78 (s, 3H), 3.41 (dd, J =
11.7, 9.3 Hz, 1H), 2.11 (s, 3H), 2.08 (s, 3H), 2.05 (s, 3H); 13C NMR (101 MHz, CDCl3)  170.19, 169.94,
169.51, 169.50, 152.13, 150.53, 147.70, 147.68, 147.67, 144.12, 144.11, 136.48, 130.89, 128.28, 127.89,
127.88, 126.47, 126.45, 123.69, 123.66, 119.42, 119.42, 110.77, 108.35, 108.33, 106.39, 101.59, 101.39,
100.54, 100.52, 71.80, 71.49, 68.80, 66.89, 62.97, 56.37, 55.97, 20.98, 20.82, 20.82; HRMS-ESI calcd for
C32H30O14 (M+Na)+ 661.15278, found 661.15210.
4.1.2.4. 7-O-(2”,3”,4”,6”-Tetra-O-acetyl--D-galactopyranosyl) diphyllin (9a). Starting from 1,2,3,4,6-penta-
O-acetyl-D-galactopyranose and following the general procedure for bromination/glycosylation, flash
chromatography (silica gel, 50% EtOAc in hexanes) provided compound 9a (444 mg, 68%) as an off-white
solid: 1H NMR (400 MHz, CDCl3)  7.54 (s, 1H), 7.05 (s, 1H), 6.94 (d, J = 7.9 Hz, 1H), 6.80 (s, 1H), 6.77 (br d,
J = 4.9 Hz, 1H), 6.07 (br s, 1H), 6.03 (d, J = 5.2 Hz, 1H), 5.71 (dd, J = 10.2, 8.1 Hz, 1H), 5.55 (d, J = 14.7 Hz,
1H), 5.49 (d, J = 2.7 Hz, 1H), 5.39 (br d, J = 14.7 Hz, 1H), 5.20 – 5.11 (m, 2H), 4.26 – 4.14 (m, 2H), 4.07 (s,
3H), 4.07 – 4.03 (m, 1H), 3.79 (s, 3H), 2.23 (s, 3H), 2.07 (s, 3H), 2.03 (br s, 6H); 13C NMR (101 MHz, CDCl3)
 170.46, 170.22, 170.08, 169.68, 169.47, 169.46, 152.07, 150.55, 147.66, 144.41, 136.13, 130.78, 128.30,
125.93, 125.90, 125.65, 125.62, 123.65, 123.62, 119.35, 119.34, 110.74, 108.32, 108.30, 106.23, 101.37,

Page 19 of 33
101.14, 101.13, 100.69, 100.66, 71.99, 70.78, 69.19, 67.10, 67.03, 61.95, 56.38, 55.94, 21.10, 20.77, 20.69,
20.64; HRMS-ESI calcd for C35H34O16 (M+Na)+ 733.17391, found 733.17368.
4.1.2.5. 7-O-(2”,3”,4”-Tri-O-acetyl--D-arabinopyranosyl) diphyllin (10). Starting from 1,2,3,4-tetra-O-acetyl-
D-arabinopyranose and following the general procedure for bromination/glycosylation, flash chromatography
1
afforded compound 10: [] +11.1 (c 0.43, CHCl3); H NMR (300 MHz, CDCl3)  7.54 (s, 1H), 7.07 (s, 1H),
6.96 (d, J = 7.8 Hz, 1H), 6.85 – 6.76 (m, 2H), 6.10 (d, J = 1.4 Hz, 1H), 6.05 (br s, 1H), 5.70 (dd, J = 9.6, 7.0 Hz,
1H), 5.49 (d, J = 14.8 Hz, 1H), 5.42 (br d, J = 14.7 Hz, 1H), 5.39 – 5.36 (m, 1H), 5.17 (dd, J = 9.6, 3.5 Hz, 1H),
5.09 (d, J = 7.0 Hz, 1H), 4.19 (dd, J = 13.1, 3.1 Hz, 1H), 4.09 (s, 3H), 3.81 (s, 3H), 3.72 (dd, J = 13.0, 1.3 Hz,
1H), 2.22 (s, 3H), 2.11 (s, 3H), 2.08 (s, 3H); HRMS-ESI calcd for C32H30O14 (M+Na)+ 661.15278, found
661.15188.
4.1.2.6. 7-O-(Hepta-O-acetyl-β-D-galactopyranosyl-(1→4)-D-glucopyranosyl) diphyllin (11). Starting from
lactose octaacetate and following the general procedure for bromination/glycosylation, flash chromatography
afforded compound 11: 1H NMR (400 MHz, CDCl3)  7.47 (s, 1H), 7.07 (s, 1H), 6.96 (dd, J = 7.8, 1.6 Hz, 1H),
6.83 – 6.77 (m, 2H), 6.09 (br s, 1H), 6.05 (br s, 1H), 5.50 (br d, J = 14.8, 1H), 5.46 – 5.40 (m, 2H), 5.39 – 5.36
(m, 1H), 5.34 – 5.29 (m, 1H), 5.16 – 5.09 (m, 2H), 5.01 – 4.96 (m, 1H), 4.52 (d, J = 7.9 Hz, 1H), 4.49 (br d, J =
10.3 Hz, 1H), 4.19 – 4.06 (m, 4H), 4.05 (s, 3H), 3.93 – 3.86 (m, 2H), 3.80 (s, 3H), 3.74 – 3.68 (m, 1H), 2.16 (s,
3H), 2.10 (s, 3H), 2.09 (s, 3H), 2.08 (s, 3H), 2.06 (d, J = 2.0 Hz, 3H), 2.04 (s, 3H), 1.97 (s, 3H); 13C NMR (101
MHz, CDCl3) δ 170.50, 170.29, 170.22, 170.16, 169.80, 169.78, 169.48, 169.23, 152.15, 150.57, 147.73,
147.71, 147.70, 144.08, 136.45, 130.88, 128.26, 127.09, 126.11, 126.10, 123.70, 123.66, 119.38, 110.76,
108.38, 106.38, 101.41, 101.30, 100.83, 100.41, 100.38, 76.30, 73.63, 72.79, 72.04, 71.01, 70.99, 69.20, 66.99,
66.74, 62.12, 60.96, 56.34, 55.99, 21.04, 20.89, 20.78, 20.78, 20.77, 20.72, 20.63; HRMS-ESI calcd for
C47H50O24 (M+Na)+ 1021.25842, found 1021.25795.
4.1.3. Synthesis of per-hydroxy diphyllin glycosides:

Page 20 of 33
4.1.3.1. General procedure for global deacetylation. 7-O--L-arabinopyranosyl diphyllin (6b). To a solution of
6a (324.4 mg, 0.511 mmol) in methanol (32 mL) was added K2CO3 (284 mg, 2.05 mmol) and the resulting
mixture was stirred at room temperature for 30 minutes. The reaction was then quenched via the addition of
aqueous HCl (2 M), filtered through filter paper, and concentrated under reduced pressure. Flash
chromatography (silica gel, 2% → 10% MeOH in CHCl3) afforded compound 6b (259 mg, 99%) as an off
white solid: 1H NMR (400 MHz, (CD3)2SO)  8.17 (s, 1H), 7.04 (d, J = 7.9 Hz, 1H), 6.98 (d, J = 2.3 Hz, 1H),
6.93 (br s, 1H), 6.80 (br d, J = 7.9, 1H), 6.13 (s, 2H), 5.81 – 5.76 (m, 1H), 5.53 (br d, J = 14.8 Hz, 1H), 5.45 (d,
J = 15.0 Hz, 1H), 5.06 (d, J = 5.0 Hz, 1H), 4.79 (t, J = 7.1 Hz, 1H), 4.76 (d, J = 3.7 Hz, 1H), 3.94 (s, 3H), 3.84
(br dd, J = 12.2, 6.5 Hz, 1H), 3.77 (br d, J = 11.5 Hz, 1H), 3.70 (br s, 1H), 3.67 (s, 3H), 3.52 (br s, 1H), 3.44 (d,
13
J = 11.5 Hz, 1H); C NMR (75 MHz, (CD3)2SO)  169.00, 151.39, 149.95, 146.90, 146.84, 144.57, 134.49,
134.44, 129.68, 128.87, 128.70, 128.24, 126.60, 123.57, 118.65, 110.84, 110.77, 107.91, 105.41, 104.82,
104.70, 101.86, 101.08, 72.24, 70.82, 67.25, 67.21, 67.03, 65.71, 65.65, 55.81, 55.19; HRMS-ESI calcd for
C26H24O11 (M+Na)+ 535.12108, found 535.12058.
4.1.3.2. 7-O--D-Xylopyranosyl diphyllin (7b). Starting from 7a and following the general procedure for global
deacetylation, flash chromatography (2% → 10% MeOH in CHCl3) afforded compound 7b (67 mg, 88%) as a
white solid: 1H NMR (400 MHz, (CD3)2SO)  8.12 (br s, 1H), 7.04 (d, J = 7.9 Hz, 1H), 6.99 (s, 0.5H), 6.98 (s,
0.5H), 6.93 (d, J = 1.6 Hz, 0.5H), 6.91 (d, J = 1.6 Hz, 0.5H), 6.80 (dd, J = 7.9, 1.8 Hz, 0.5H), 6.79 (dd, J = 7.9,
1.8 Hz, 0.5H), 6.12 (br s, 2H), 5.93 (dd, J = 5.4, 2.9 Hz, 1H), 5.51 (br d, J = 15.2 Hz, 1H), 5.44 (d, J = 15.1 Hz,
1H), 5.23 (d, J = 4.9 Hz, 1H), 5.07 (d, J = 4.8 Hz, 1H), 4.76 (dd, J = 7.6, 4.8 Hz, 1H), 3.94 (s, 3H), 3.81 (dd, J =
11.3, 5.2 Hz, 1H), 3.67 (s, 3H), 3.50 – 3.40 (m, 2H), 3.29 – 3.22 (m, 1H), 3.18 – 3.08 (m, 1H); 13C NMR (101
MHz, (CD3)2SO)  169.04, 151.47, 149.96, 146.94, 146.92, 146.89, 144.71, 144.68, 134.92, 134.89, 129.78,
129.74, 129.73, 129.65, 128.18, 126.70, 126.69, 123.59, 123.55, 118.69, 110.86, 110.75, 107.95, 107.92,
105.73, 105.68, 105.47, 101.64, 101.11, 79.16, 76.29, 73.59, 69.30, 67.00, 65.90, 55.82, 55.21; HRMS-ESI
calcd for C26H24O11 (M+K)+ 551.09502, found 551.09371.

Page 21 of 33
4.1.3.3. 7-O--D-Glucopyranosyl diphyllin (8b). Starting from 8a and following the general procedure for
global deacetylation, flash chromatography (2% → 10% MeOH in CHCl3) afforded compound 8b (49.9 mg,
98%) as a white solid: 1H NMR (400 MHz, (CD3)2SO) 8.19 (s, 0.5H), 8.18 (s, 0.5H), 7.04 (d, J = 7.9 Hz, 1H),
6.982 (s, 0.5H), 6.976 (s, 0.5H), 6.96 (d, J = 1.4 Hz, 0.5H), 6.92 (d, J = 1.6 Hz, 0.5H), 6.81 (dd, J = 8.1, 1.7 Hz,
0.5H), 6.79 (dd, J = 8.0, 1.7 Hz, 0.5H), 6.13 (br s, 2H), 5.99 (dd, J = 5.3, 2.9 Hz, 1H), 5.77 (d, J = 15.4 Hz, 1H),
5.48 (br d, J = 15.5, 1H), 5.25 (d, J = 5.0 Hz, 1H), 5.09 (d, J = 5.2 Hz, 1H), 4.77 – 4.72 (m, 1H), 4.70 (dd, J =
10.8, 5.4 Hz, 1H), 3.95 (s, 3H), 3.77 (br dd, J = 11.2, 4.7 Hz, 1H), 3.67 (s, 3H), 3.50 – 3.42 (m, 2H), 3.32 – 3.20
(m, 2H), 3.18 – 3.11 (m, 1H); 13C NMR (101 MHz, (CD3)2SO)  169.22, 151.46, 149.95, 146.96, 146.95,
146.90, 144.86, 144.83, 134.94, 134.88, 130.02, 129.88, 129.68, 128.29, 126.78, 126.74, 123.63, 123.57,
118.85, 110.94, 110.79, 107.97, 105.39, 105.12, 105.07, 101.75, 101.15, 77.28, 76.35, 73.79, 70.06, 67.42,
61.30, 55.86, 55.22; HRMS-ESI calcd for C27H26O12 (M+Na)+ 565.13165, found 565.13081.
4.1.3.4. 7-O--D-Galactopyranosyl diphyllin (9b). Starting from 9a and following the general procedure for
1
global deacetylation, flash chromatography afforded 9b as a white solid: H NMR (400 MHz, DMSO) δ 8.203
(s, 0.5H), 8.196 (s, 0.5H), 7.04 (d, J = 7.9 Hz, 1H), 6.983 (s, 0.5H), 6.979 (s, 0.5H), 6.95 (d, J = 1.4 Hz, 0.5H),
6.91 (d, J = 1.4 Hz, 0.5H), 6.83 – 6.77 (m, 1H), 6.13 (br s, 2H), 5.77 (dd, J = 5.3, 2.8 Hz, 1H), 5.70 (d, J = 15.3
Hz, 1H), 5.49 (br d, J = 15.2 Hz, 1H), 4.97 (d, J = 5.7 Hz, 1H), 4.71 (dd, J = 7.3, 6.4 Hz, 1H), 4.68 (dd, J = 9.6,
4.7 Hz, 1H), 4.61 (d, J = 4.3 Hz, 1H), 3.95 (s, 3H), 3.82 – 3.75 (m, 1H), 3.69 – 3.66 (m, 1H), 3.67 (s, 3H), 3.64
– 3.56 (m, 2H), 3.50 – 3.40 (m, 2H); 13C NMR (101 MHz, DMSO) δ 169.16, 151.40, 149.92, 146.92, 146.85,
145.00, 144.97, 134.77, 129.76, 129.67, 129.61, 128.29, 126.76, 123.60, 123.52, 118.80, 110.89, 110.73,
107.93, 105.69, 105.64, 105.40, 101.85, 101.09, 75.91, 73.09, 70.81, 68.43, 67.35, 60.97, 55.81, 55.19; HRMS-
ESI calcd for C27H26O12 (M+H)+ 543.14970, found 543.14940.
4.1.4. Synthesis of per-methylated diphyllin glycosides:
4.1.4.1. General procedure for global methylation. 7-O-(2”,3”,4”-Tri-O-methoxy--L-arabinopyranosyl)
diphyllin (6c). Sodium hydride (43 mg, 1.072 mmol) was added to a solution of 6b (137.5 mg, 0.268 mmol) in

Page 22 of 33
DMF (3.58 mL) at 0 °C and stirred for 30 minutes prior to the dropwise addition of methyl iodide (133 μL,
2.144 mmol). The reaction was then stirred at 80 °C overnight. Upon cooling to room temperature, the reaction
was quenched with water and extracted with a mixture of EtOAc/hexanes (1:1). The combined organic layers
were washed with water, brine, and then dried with sodium sulfate and concentrated under reduced pressure.
Flash column chromatography (65% → 75% EtOAc in hexanes) afforded compound 6c (107 mg, 72%) as an
off white solid: 1H NMR (300 MHz, CDCl3)  7.92 (s, 1H), 7.08 (s, 1H), 6.95 (d, J = 7.6, 1H), 6.85 – 6.77 (m,
2H), 6.09 (d, J = 1.5 Hz, 1H), 6.04 (d, J = 1.4 Hz, 1H), 5.55 (br d, J = 15.2 Hz, 1H), 5.46 (br d, J = 15.2 Hz,
1H), 4.77 (d, J = 7.3 Hz, 1H), 4.14 (br dd, J = 13.0, 2.6 Hz, 1H), 4.07 (s, 3H), 3.81 (s, 3H), 3.80 (s, 3H), 3.78 –
3.73 (m, 1H), 3.66 – 3.63 (m, 1H), 3.57 (s, 3H), 3.53 (s, 3H), 3.34 (dd, J = 9.2, 3.4 Hz, 1H), 3.22 (br d, J = 12.4
Hz, 1H); 13C NMR (75 MHz, CDCl3) δ 169.99, 152.00, 150.30, 147.63, 144.63, 136.35, 130.94, 130.87, 130.83,
128.58, 127.24, 123.80, 123.68, 119.43, 110.91, 110.81, 108.34, 108.29, 106.36, 105.06, 101.35, 101.07, 82.58,
80.61, 74.49, 67.72, 62.40, 61.50, 58.00, 57.56, 56.30, 55.96; HRMS-ESI calcd for C29H30O11 (M+Na)+
577.16803, found 577.16735.
4.1.4.2. 7-O-(2”,3”,4”-Tri-O-methoxy--D-xylopyranosyl) diphyllin (7c) and methyl 1-(benzo[d][1,3]dioxol-5-
yl)-6,7-dimethoxy-3-(methoxymethyl)-4-(((2S,3R,4S,5R)-3,4,5-trimethoxytetrahydro-2H-pyran-2-yl)oxy)-2-
naphthoate (12). Starting from 7b and following the general procedure for global methylation, flash
chromatography (5% EtOH, 1% EtOAc in Hexanes) afforded compound 7c (Rf = 0.23 in a 20:7.5:72.5 mixture
of EtOAc/EtOH/Hex , 60 mg, 56%) as an off-white solid as well as byproduct 12 (Rf = 0.26 in a 20:7.5:72.5
1
mixture of EtOAc/EtOH/Hex, 2 mg, 1.7%) as a white solid. 7c: H NMR (400 MHz, CDCl3)  7.85 (s, 1H),
7.09 (s, 1H), 6.96 (br d, J = 7.2, 1H), 6.85 – 6.78 (m, 2H), 6.09 (br s, 1H), 6.05 (br s, 1H), 5.51 (d, J = 15.1,
1H), 5.42 (d, J = 15.0, 1H), 4.77 (d, J = 7.6 Hz, 1H), 4.08 (s, 3H), 4.05 – 3.99 (m, 1H), 3.83 (s, 3H), 3.81 (s,
3H), 3.68 (s, 3H), 3.49 (s, 3H), 3.43 – 3.35 (m, 2H), 3.22 (t, J = 8.7 Hz, 1H), 3.05 (dd, J = 11.6, 10.0 Hz, 1H);
13C NMR (75 MHz, CDCl3)  169.91, 152.10, 150.33, 147.66, 144.47, 136.57, 131.16, 131.13, 130.99, 128.51,
127.20, 123.77, 123.72, 119.42, 110.87, 110.83, 108.33, 106.46, 105.30, 101.37, 100.82, 85.67, 83.64, 79.53,

Page 23 of 33
77.58, 77.16, 76.74, 67.46, 63.64, 61.42, 60.89, 58.92, 56.27, 55.98; HRMS-ESI calcd for C29H30O11 (M+Na)+
577.16803, found 577.16722. 12: [] -16.7(c 0.09, CHCl3); IR max (KBr, cm-1): 2930, 2831, 1724, 1623,
1508; 1H NMR (400 MHz, CDCl3)  7.85 (s, 1H), 6.91 – 6.75 (m, 4H), 6.05 (br s, 1H), 6.02 (br s, 1H), 4.95 (dd,
J = 12.9, 11.6 Hz, 1H), 4.77 – 4.68 (m, 2H), 4.04 (s, 3H), 3.94 (dd, J = 11.8, 5.4 Hz, 1H), 3.83 (s, 3H), 3.772 (s,
1.5H), 3.766 (s, 1.5H) 3.68 (s, 3H), 3.56 (s, 1.5H), 3.55 (s, 1.5H), 3.48 (s, 3H), 3.44 – 3.33 (m, 3H), 3.319 (s,
1.5H), 3.317 (s, 1.5H), 3.22 – 3.16 (m, 1H), 2.97 – 2.90 (m, 1H); 13C NMR (101 MHz, CDCl3)  169.97,
169.94, 150.46, 150.45, 150.09, 148.65, 148.60, 147.47, 147.39, 147.10, 147.06, 133.71, 131.91, 130.57,
129.30, 129.25, 124.14, 124.05, 124.01, 123.58, 111.08, 110.74, 108.20, 108.15, 106.00, 105.98, 105.53,
102.26, 102.24, 101.24, 86.04, 84.32, 84.31, 79.74, 67.01, 63.78, 61.44, 60.95, 58.92, 58.36, 58.35, 56.17,
55.90, 55.88, 51.85, 51.84, 29.85; HRMS-ESI calcd for C31H36O12 (M+Na)+ 623.20990, found 623.21148; mp
76-78 C.
4.1.5. Preparation of lactone (C-ring) analogues:
4.1.5.1. Diethyl 1-(benzo[d][1,3]dioxol-5-yl)-6,7-dimethoxy-4-(((2S,3R,4S,5S)-3,4,5-triacetoxytetrahydro-2H-
pyran-2-yl)oxy)naphthalene-2,3-dicarboxylate (13). Starting from 1,2,3,4-tetra-O-acetyl-L-arabinopyranose and
following the general procedure for bromination/glycosylation using 4 (the diester precursor to diphyllin) as the
glycosidic acceptor, flash chromatography afforded compound 13 (105 mg, 45%) as a white solid: [] 17.2(c
0.20, CHCl3); IR max (KBr, cm-1): 3070, 2981, 2938, 2904, 2833, 2777, 1747, 1684, 1621; 1H NMR (300 MHz,
CDCl3) δ 7.64 (s, 1H), 7.62 (s, 1H), 6.93-6.68 (m, 5H), 6.82 – 6.76 (m, 2H) , 6.73 – 6.69 (m, 1H), 6.07 (d, J =
1.4 Hz, 1H), 6.06 (d, J = 1.4 Hz, 1H), 6.02 (d, J = 1.5 Hz, 1H), 6.01 (d, J = 1.5 Hz, 1H), 5.68 (dd, J = 7.0, 1.4
Hz, 1H), 5.65 (dd, J = 6.8, 1.4 Hz, 1H), 5.32 – 5.27 (m, 2H), 5.16 (d, J = 6.5 Hz, 1H), 5.14 (d, J = 6.5 Hz, 1H),
5.13 (dd, J = 3.3, 1.5 Hz, 1H), 5.10 (dd, J = 3.5, 1.3 Hz, 1H), 4.42 – 4.30 (m, 4H), 4.05 (br s, 6H), 4.05 – 3.98
(m, 4H), 3.78 (s, 3H), 3.77 (s, 3H), 3.552 (d, J = 13.0 Hz, H), 3.546 (d, J = 12.9 Hz, 1H), 2.16 (br s, 6H), 2.14 (s,
3H), 2.13 (s, 3H), 2.08 (br s, 6H), 1.40 (t, J = 7.2 Hz, 3H), 1.395 (t, J = 7.2 Hz, 3zH), 1.03 (t, J = 7.2 Hz, 3H),
1.027 (t, J = 7.1 Hz, 3H); 13C NMR (75 MHz, CDCl3) δ 170.34, 170.23, 169.71, 169.65, 168.13, 168.10, 166.44,

Page 24 of 33
166.37, 151.22, 150.73, 150.70, 148.47, 148.43, 147.61, 147.48, 147.34, 147.28, 134.29, 134.27, 131.51,
131.42, 130.54, 130.52, 128.65, 128.51, 125.08, 124.96, 123.85, 123.33, 120.71, 120.44, 110.91, 110.52,
108.32, 108.23, 105.79, 102.80, 102.73, 102.67, 101.30, 70.31, 69.56, 69.52, 67.63, 63.69, 63.65, 61.76, 61.33,
56.11, 55.93, 55.90, 21.04, 21.00, 20.85, 14.17, 13.88; HRMS-ESI calcd for C36H38O16 (M+Na)+ 749.20521,
found 749.20282; mp 117-119 C.
4.1.5.2.
((9-(Benzo[d][1,3]dioxol-5-yl)-6,7-dimethoxy-1,3-dihydronaphtho[2,3-c]furan-4-yl)oxy)(tert-
butyl)dimethylsilane (14). A solution of diphyllin 5 (0.987 g, 2.595 mmol), TBSCl (1.173 g, 7.785 mmol), and
imidazole (0.618 g, 9.083 mmol) in DMF (26 mL) was reacted at room temperature overnight. The reaction
was quenched with water and extracted with EtOAc. The combined organic layers were washed with cold
water, brine, and then dried over magnesium sulfate before being concentrated under reduced pressure. Flash
column chromatography (2:1:17 EtOAc/DCM/Hex → 3:1:16 EtOAc/DCM/Hex) afforded TBS-protected
diphyllin (828 mg, 65%) as a white crystalline solid: IR max (KBr, cm-1): 3074, 3010, 2955, 2932, 2887, 2859,
2831, 2776, 2255, 1766, 1613, 1599, 1507; 1H NMR (400 MHz, CDCl3)  7.46 (s, 1H), 7.08 (s, 1H), 6.96 (d, J
= 7.8 Hz, 1H), 6.85 (d, J = 1.4 Hz, 1H), 6.81 (dd, J = 7.9, 1.7 Hz, 1H), 6.09 (d, J = 1.4 Hz, 1H), 6.05 (d, J = 1.4
Hz, 1H), 5.33 (s, 2H), 4.04 (s, 3H), 3.81 (s, 3H), 1.15 (s, 9H), 0.29 (s, 6H); 13C NMR (75 MHz, CDCl3) 
170.10, 162.47, 151.24, 150.17, 147.62, 147.52, 143.68, 133.56, 130.96, 128.74, 127.04, 126.54, 123.88,
119.49, 111.02, 108.27, 106.47, 101.31, 67.04, 56.18, 55.94, 25.97, 18.73, -3.05; HRMS-ESI calcd for
C27H30O7Si (M+Na)+ 517.16530, found 517.16563; mp 190-191.5 C. Following the procedure reported by
Sakai and coworkers for the reduction of lactones,54 a reaction vial, charged with TBS-protected diphyllin
(0.128 g, 0.259 mmol), was flushed with argon several times using a schlenck line. The starting material was
then dissolved with freshly distilled CHCl3 (0.26 mL) prior to the successive addition of InBr3 (0.005 g, 0.013
mmol) and Et3SiH (0.165 mL, 1.036 mmol). The vial was immediately capped, shaken, and then stirred at 60
C for 2 hrs. The reaction was quenched with water and then extracted with EtOAc. The combined organic
layers were dried over magnesium sulfate and concentrated under reduced pressure. Flash column

Page 25 of 33
chromatography (1:2:17 EtOAc/CHCl3/Hex) afforded compound 14 (118 mg, 95%) as a white crystalline solid:
IR max (KBr, cm-1): 3070, 3003, 2955, 2931, 2897, 2858, 2830, 2360, 2341, 1619, 1594, 1509; 1H NMR (400
MHz, CDCl3)  7.44 (s, 1H), 6.98 (s, 1H), 6.92 (d, J = 7.8 Hz, 1H), 6.82 (d, J = 1.3 Hz, 1H), 6.79 (dd, J = 7.9,
1.6 Hz, 1H), 6.07 (d, J = 1.3 Hz, 1H), 6.04 (d, J = 1.2 Hz, 1H), 5.24 (s, 2H), 4.97 (s, 2H), 4.00 (s, 3H), 3.80 (s,
13
3H), 1.13 (s, 9H), 0.26 (s, 6H); C NMR (75 MHz, CDCl3)  149.46, 148.68, 147.94, 146.94, 143.28, 136.76,
132.52, 129.88, 124.85, 123.44, 123.33, 123.18, 110.25, 108.67, 104.89, 101.95, 101.27, 73.73, 72.89, 56.00,
55.86, 26.06, 18.73, -3.18; HRMS-ESI calcd for C27H32O6Si (M+Na)+ 503.18604, found 503.18721; mp 162-
164 C.
4.1.5.3. 9-(Benzo[d][1,3]dioxol-5-yl)-6,7-dimethoxy-1,3-dihydronaphtho[2,3-c]furan-4-ol (15). A solution of
14 (0.075 g, 0.156 mmol) and TBAF (1 M in THF, 0.234 mL) in DCM (1.7 mL) was stirred at room
temperature for 30 minutes. The reaction mixture was quenched with water and several drops of HCl (aq., 2M)
before being extracted with DCM. The combined organic layers were washed with water, brine, and then dried
over sodium sulfate and concentrated under reduced pressure. Flash column chromatography (2:1:17
EtOAc/EtOH/Hex) afforded compound 15 (53 mg, 93%) as an orange solid: IR max (KBr, cm-1): 3271, 3091,
3003, 2939, 2902, 2860, 2833, 2780, 1620, 1597, 1509; 1H NMR (400 MHz, Acetone-d6)  7.62 (s, 1H), 7.02 (s,
1H), 6.98 (d, J = 7.9 Hz, 1H), 6.87 (d, J = 1.7 Hz, 1H), 6.83 (dd, J = 7.9, 1.7 Hz, 1H), 6.09 (s, 1H), 6.07 (s, 1H),
5.18 (s, 2H), 4.92 (d, J = 12.4 Hz, 1H), 4.88 (d, J = 12.3 Hz, 1H), 3.93 (s, 3H), 3.71 (s, 3H); 13C NMR (75 MHz,
Acetone-d6)  150.74, 149.83, 148.83, 147.68, 145.16, 137.37, 133.52, 130.36, 123.99, 123.54, 121.29, 119.22,
110.89, 109.23, 105.65, 102.14, 101.99, 73.76, 72.26, 55.89, 55.68; HRMS-ESI calcd for C21H18O6 (M+Na)+
389.09956, found 389.09906.
4.1.5.4. 4-(Benzo[d][1,3]dioxol-5-yl)-9-hydroxy-6,7-dimethoxynaphtho[2,3-c]furan-1(3H)-one (16). A mixture
of 14 (0.100 g, 0.208 mmol) and Cs2CO3 (0.068 g, 0.208 mmol) in DMF/H2O (10:1, v/v, 0.229 mL) was stirred
overnight at room temperature open to the air. The reaction was quenched with HCl (aq., 2M) and extracted
with EtOAc. The combined organic layers were washed with HCl (aq., 2M), water, brine, and then dried over

Page 26 of 33
sodium sulfate. Flash column chromatography (25  30% EtOAc in Hex) then afforded compound 16 (15 mg,
19%) as a pale yellow solid: 1H NMR (400 MHz, Acetone-d6)  9.02 (s, 1H), 7.67 (s, 1H), 7.14 (s, 1H), 7.03 (d,
J = 7.9 Hz, 1H), 6.98 (d, J = 1.5 Hz, 1H), 6.94 (dd, J = 7.9, 1.7 Hz, 1H), 6.12 (s, 1H), 6.10 (s, 1H), 5.31 (d, J =
14.7 Hz, 1H), 5.26 (d, J = 14.7 Hz, 1H) 4.00 (s, 3H), 3.79 (s, 3H); 13C NMR (101 MHz, Acetone-d6)  173.22,
153.59, 153.17, 150.52, 149.20, 148.28, 138.24, 134.53, 130.90, 124.17, 119.96, 110.82, 109.60, 105.59,
104.22, 102.52, 102.36, 70.73, 56.11, 55.87; HRMS-ESI calcd for C21H16O7 (M+Na)+ 403.07882, found
403.07804.
4.1.5.5.
(2S,3R,4S,5S)-2-((9-(Benzo[d][1,3]dioxol-5-yl)-6,7-dimethoxy-1,3-dihydronaphtho[2,3-c]furan-4-
yl)oxy)tetrahydro-2H-pyran-3,4,5-triyl triacetate (17). Starting from 1,2,3,4-tetra-O-acetyl-L-arabinopyranose
and following the general procedure for bromination/glycosylation replacing diphyllin with compound 15, flash
chromatography (3:6:11 EtOAc/CHCl3/Hex → 4:6:10 EtOAc/CHCl3/Hex) afforded compound 17 (63 mg,
33%) as a white solid: [] -9.02(c 0.12, CHCl3); IR max (KBr, cm-1): 3072, 3002, 2958, 2905, 2859, 2834,
2780, 2255, 1748, 1621, 1592, 1508; 1H NMR (400 MHz, CDCl3) δ 7.53 (s, 1H), 6.95 (s, 1H), 6.93 (d, J = 7.8
Hz, 1H), 6.79 (d, J = 1.9 Hz, 1H), 6.77 (dd, J = 7.7, 1.9 Hz, 1H), 6.07 (br s, 1H), 6.04 (br s, 1H), 5.68 (dd, J =
9.6, 7.2 Hz, 1H), 5.38 (br d, J = 12.5 Hz, 1H), 5.35 (br s, 1H), 5.29 (br d, J = 12.4 Hz, 1H), 5.14 (dd, J = 9.7, 3.5
Hz, 1H), 5.01 (d, J = 7.1 Hz, 1H), 4.97 (br d, J = 13.9 Hz, 1H), 4.93 (br d, J = 12.8 Hz, 1H), 4.16 (br d, J =
13
13.1, 1H), 4.04 (br s, 3H), 3.80 (br s, 3H), 3.69 (br d, J = 13.1 Hz, 1H), 2.21 (br s, 3H), 2.07 (br s, 6H); C
NMR (101 MHz, CDCl3) δ 170.45, 170.30, 169.75, 149.84, 149.36, 147.99, 147.12, 144.63, 136.73, 131.99,
129.73, 127.28, 123.29, 123.04, 122.93, 122.70, 110.03, 109.95, 108.78, 108.76, 104.59, 101.50, 101.36, 73.29,
72.41, 70.46, 69.56, 67.62, 64.10, 56.16, 55.86, 21.12, 20.85; HRMS-ESI calcd for C32H32O13 (M+Na)+
647.17351, found 647.17458; mp 117-119.5 C.
4.1.5.6. (2S,3R,4S,5S)-2-((9-(Benzo[d][1,3]dioxol-5-yl)-6,7-dimethoxy-3-oxo-1,3-dihydronaphtho[2,3-c]furan-
4-yl)oxy)tetrahydro-2H-pyran-3,4,5-triyl triacetate (18). Starting from 1,2,3,4-tetra-O-acetyl-L-arabinopyranose
and following the general procedure for bromination/glycosylation replacing diphyllin with compound 16, flash

Page 27 of 33
chromatography (0.75% MeOH in CHCl3) afforded compound 18 (20 mg, 80%) as a pale-orange solid: [] -
18.8(c 0.09, CHCl3); IR max (KBr, cm-1): 3073, 3005, 2958, 2936, 2835, 2780, 2256, 1749, 1619, 1598, 1507;
1H NMR (400 MHz, CDCl3) δ 7.85 (s, 1H), 6.96 (dd, J = 8.0, 2.2 Hz, 1H), 6.93 (s, 1H), 6.80 – 6.75 (m, 2H),
6.22 (d, J = 7.3 Hz, 1H), 6.09 (br s, 1H), 6.06 (br s, 1H) 5.70 (dd, J = 9.8, 7.3 Hz, 1H), 5.36 (br s, 1H), 5.27
(dd, J = 9.9, 3.6 Hz, 1H), 5.15 (br d, J = 15.2 Hz, 1H), 5.10 (br d, J = 15.0 Hz, 1H), 4.10 (s, 3H), 4.09 – 4.01 (m,
2H), 3.86 (br s, 1H), 3.83 (s, 3H), 2.16 (s, 3H), 2.07 (s, 3H), 2.06 (s, 3H); 13C NMR (101 MHz, CDCl3) δ
170.39, 170.35, 170.12, 169.54, 152.61, 149.90, 149.46, 148.41, 148.39, 147.69, 138.60, 133.55, 129.61,
127.16, 123.84, 123.03, 109.83, 109.18, 109.15, 108.52, 103.77, 101.56, 101.33, 70.23, 69.92, 69.01, 67.99,
64.46, 56.32, 56.03, 21.10, 21.09, 20.83; HRMS-ESI calcd for C32H30O14 (M+Na)+ 661.15278, found
661.15392; mp 112-114.5 C.
4.2. Biology
4.2.1. HT-29 cell proliferation assay
The cytotoxicity of compounds 6a-c, 7a-c, 12, and 17-18 was screened against HT-29 cell lines using the
previously reported protocol.63
4.2.2. HT-29 and OVCAR3 cell proliferation assays
The cytotoxicity of the tested compounds was screened against HT-29 (compounds 8a-b, 9a-b, 10-11, and 13)
and OVCAR3 cell lines using the following protocol:
4.2.2.1 Cell Culture
Ovarian cancer cell line, OVCAR3, and colon cancer cell line, HT-29, were purchased from the American Type
Culture Collection. OVCAR3 cells were grown in RPMI 1640 medium supplemented with 20% fetal bovine
serum (FBS), 1% penicillin/streptomycin (P/S), and 10 μg/mL insulin. HT-29 cells were grown in RPMI 1640
with 10% FBS and 1% P/S. Cultured cells were maintained in a humidified incubator at 37C in 5% CO2. Cells
were passaged a maximum of 20 times after resuscitation from frozen stocks. Cell lines were validated by STR
in 2015 and 2017 and tested mycoplasma free in 2017.

Page 28 of 33
4.2.2.2 Cell Viability Assay
Cells were seeded in 96-well, clear, flat-bottomed plates at 2,500 to 5,000 cells per well, depending on the cell
line, and allowed to attach overnight. Compounds suspended in DMSO were diluted to final concentrations as
noted in figures in the appropriate media and added to the cells. The final vehicle concentration was 0.25% to
achieve the widest dose range possible. Cells were incubated for 24, 48, or 72 hours. The amount of cellular
protein content attached to the plate bottom after fixation at the end of the treatment period was dyed and
measured as previously described with sulforhodamine B (SRB) assay as a measure of cell survival.64
Treatment measurements were normalized to vehicle, and dose response curves with corresponding IC50 values
were generated using Graphpad Prism Software.
4.2.3. K562 and K/VP.5 cell proliferation assays
A cell proliferation assay65 was performed by using 3-(4,5-dimethylthiazol-2-yl)-5-(3-carboxymethoxyphenyl)-
2-(4-sulfophenyl)-2H-tetrazolium (MTS), the CellTiter 96® AQueous One Solution Reagent (Promega,
Madison, WI) which measures the ability of viable cells to enzymatically reduce MTS. DMSO used as control
or various concentrations of phyllanthusmin analogs dissolved in DMSO were added to one ml cell suspensions
(7.5 x 104 cell/ml) of K562 and K/VP.5 cells (final DMSO concentration 0.5%) followed by addition of
triplicate 0.1 ml aliquots from these cell suspensions to 96 well plates. After 72 hr incubation at 37°C, 6 µL of
MTS reagent was added to each well followed by incubation for 1 hr at 37°C. Reduced MTS was measured by
absorbance at 490 nm using a SynergyH1 Hybrid Reader (Biotek, Winooski, Vermont). The IC50 values for
growth inhibition were determined using a logistic four parameter fit of concentration versus absorbance curves
(Sigma Plot, Systat Software Inc. San Jose, CA, USA).
4.2.4. Topoisomerase IIα-catalyzed plasmid DNA relaxation
Reaction mixtures (20 µL) contained 125 ng of topoisomerase IIα, isolated as previously described,66 150 ng of
negatively supercoiled pBR322 DNA, 1 mM ATP in assay buffer [10 mM Tris-HCl, 50 mM KCl, 50 mM NaCl,
0.1 mM Na2EDTA, 5 mM MgCl2, 2.5% (v/v) glycerol, pH 8.0, and 1 µL of DMSO control, etoposide,

Page 29 of 33
phyllanthusmins, or diphyllin (all drugs in DMSO solvent). Components of the assay mixture were assembled
and mixed on ice prior to addition of drugs/DMSO. Reactions were initiated by addition of enzyme and
experimental mixtures were then incubated at 37°C for 15 min. DNA relaxation was quenched by addition of 2
L of a stop solution (0.77% SDS, 77 mM Na2EDTA). 4 L of 10X DNA loading solution (Invitrogen) at 45°C
was added to the mixture and incubated for 2 min. DNA bands were separated by electrophoresis (50 V for 10
min then overnight at 15 V) on a TBE agarose gel [1% (w/v)]. The agarose gel was then stained with ethidium
bromide (2 μg/ml) for 30 min. DNA bands were visualized under UV light on a Molecular Imager
(ChemiDocTM XRS, Bio-Rad). Conversion from supercoiled pBR322 DNA to relaxed topoisomer bands was
monitored as a readout of enzyme activity or its inhibition by tested agents.
Acknowledgements
This work was supported by the National Institutes of Health [grant 2P01 CA125066 (to ADK)] and pre-
doctoral fellowships from the NIH/OSU Chemistry-Biology Interface Training Program [GM08512 (to JLW)],
the American Foundation for Pharmaceutical Education (to JLW), and an OSU University Fellowship (to
ACH).
Supplementary data
Supplementary data (data in breast cancer cell lines and spectral data) associated with this article can be
found in the online version at http://dx.doi.org/##.####/j.bmc.####.##.###.
References and notes
1. Qi W, Hua L, Gao K. Chemical constituents of the plants from the genus phyllanthus. Chem Biodivers.
2014;11:364–395.
2. Ren Y, Lantvit DD, Deng Y, Kanagasabai R, Gallucci JC, Ninh TN, Chai H-B, Soejarto DD, Fuchs JR,
Yalowich JC, Yu J, Swanson SM, Kinghorn AD. Potent cytotoxic arylnaphthalene lignan lactones from
Phyllanthus poilanei. J Nat Prod. 2014;77:1494–1504.