Micropeptins from the Cyanobacterium Microcystis sp.
Journal of Natural Products, 2010, Vol. 73, No. 3 357
L) and then evaporated in Vacuo to produce 42 g of extract. The extract
was separated on an ODS Flash column with an increasing amount of
MeOH in H2O. Fraction 5′ (2:3 MeOH/H2O; 540 mg) was further
separated on a Sephadex LH-20 column with 7:3 MeOH/H2O to obtain
11 fractions (5′k-u). Fraction 6 from the RP column (1:1 MeOH/H2O;
720 mg) was separated on a Sephadex LH-20 column with 7:3 MeOH/
H2O to obtain 11 fractions (6′l-w). Fractions 5′k-n and 6′l-o were
combined (c, 300 mg) and separated again on a Sephadex LH-20
column eluted with 1:1 MeOH/H2O to obtain 10 fractions (c1-c10).
Fractions c5-c10 were combined with fractions 5′m and 6′p. The
combined fraction (d, 503 mg) was separated on a Sephadex LH-20
column eluted with 1:1 MeOH/H2O to obtain 11 fractions (d1-d11).
Fractions d5-d7 were combined (e, 188 mg) and separated on a RP
HPLC column YMC-Pack C-8 eluted with 5:15 ACN/0.1% TFA in
H2O to obtain six fractions (e1-e6), fraction e4 was found to be a
pure compound, and compound 7 (2.6 mg, 0.0006% yield) was eluted
from the column with a retention time of 43.4 min.
min (D-Thr 27.1 min), L-Glu 27.9 min (D-Glu 29.5 min), L-Ile 40.0
min (D-Ile 44.3 min), and L-NMe-Phe 42.0 min.
Cyanopeptolin S (8): amorphous, white solid; HR MALDI-TOF-
MS m/z 948.4117 [M + Na]+ (calcd for C40H63N9NaO14S, 948.4107).
Identical in all respects with the published data.10
Cyanopeptolin SS (9): amorphous, white solid; HR-ESIMS m/z
1004.3729 [M - H]- (calcd for C40H62N9O17S2, 1004.3705). Identical
in all respects with the published data.11
Determination of the Absolute Configuration of the Amino
Acids. Compounds 1-7 (0.3 mg each) were hydrolyzed in 6 M HCl
(1 mL). The reaction mixture was maintained in a sealed glass bomb
at 110 °C for 16 h. The acid was removed in Vacuo, and the residue
was resuspended in 250 µL of H2O. FDAA solution [(1-fluoro-2,4-
dinitrophenyl)-5-L-alanine amide] in acetone (115 µL, 0.03 M) and
NaHCO3 (120 µL, 1 M) were added to each reaction vessel. The
reaction mixture was stirred at 40 °C for 2 h. Then HCl (2 M, 60 µL)
was added to each reaction vessel, and the solution was evaporated in
Vacuo. The FDAA-amino acid derivatives from the hydrolysate were
dissolved in 1 mL of ACN and compared with standard FDAA-amino
acids by HPLC analysis: LiChrospher 60, RP-select B (5 µm), flow
rate 1 mL/min, UV detection at 340 nm, linear gradient elution from
9:1 50 mM triethylammonium phosphate (TEAP) buffer, pH 3/ACN,
within 60 min. The absolute configuration of each amino acid was
determined by spiking the derivatized hydrolysates with a D,L-mixture
of the standard derivatized amino acids.
Determination of the Absolute Configuration of Ahp and Amp
Derivatives. Compounds 1-7 (0.1 mg each) were oxidized with Jones’
reagent (1 drop from a solution of 1.34 g of K2CrO7, 1 mL of H2SO4
in 8 mL of H2O) in 0.5 mL of acetone at 0 °C for 10 min. The mixture
was allowed to warm to room temperature, and a few drops of MeOH
were added. The bluish residue that developed was filtered, and the
solvent was evaporated in Vacuo. The resultant products were treated
as described above.
Micropeptin MZ845 (1): amorphous, white solid; [R]23 -160 (c
D
0.05, MeOH); UV (MeOH) λmax (log ε) 203 (4.20), 250 (2.88) nm; 1H
and 13C NMR (see Tables 1 and 2); HR MALDI-TOF-MS m/z 846.4641
[M + H]+ (calcd for C40H63N9O11, 846.4720). Retention time of amino
acids (AA) Marfey’s derivatives: L-Arg 18.2 min (D-Arg 18.6 min),
L-Thr 23.3 min (D-Thr 26.9 min), L-Glu 25.4 min (D-Glu 27.0 min),
L-Ile 39.8 min (D-Ile 44.1 min), and L-NMe-Phe 41.8 min. Retention
time of D-glyceric acid on the chiral column 3.8 min (L-glyceric acid
3.4 min).
Micropeptin MZ859 (2): amorphous, white solid; [R]22 -38 (c
D
0.53, MeOH); UV (MeOH) λmax (log ε) 203 (5.04), 254 (2.71) nm; 1H
and 13C NMR (see Tables 1 and 2); HR MALDI-TOF-MS m/z 860.4893
[M + H]+ (calcd for C41H66N9O11, 860.4876). Retention time of AA
Marfey’s derivatives: L-Arg 18.3 min (D-Arg 18.4 min), L-Thr 21.1
min (D-Thr 24.6 min), L-Glu 23.1 min (D-Glu 24.9 min), L-Ile 40.5
min (D-Ile 44.3 min), and L-NMe-Phe 42.3 min. Retention time of
D-glyceric acid on the chiral column 3.7 min (L-glyceric acid 3.4 min).
Determination of the Absolute Configuration of Glyceric Acid.
Extraction of the acid hydrolysates of compounds 1-6 with ethyl ether
separated the glyceric acid from the amino acid salts. The ether was
removed in Vacuo, and the residue was dissolved in MeOH (1 mL).
The MeOH solution was analyzed on an Astec, Chirobiotic, LC
stationary phase, 250 × 4.6 mm flow rate 1 mL/min, UV detection at
210 nm, linear elution 1:49 1% triethylamine, 1% acetic acid (TEAA)
buffer, pH 4/MeOH. The glyceric acid from the micropeptins was
compared with standard D,L-glyceric acids.
Micropeptin MZ939A (3): amorphous, white solid; [R]23 -119
D
(c 0.23, MeOH); UV (MeOH) λmax (log ε) 203 (4.22), 250 (2.93) nm;
1H and 13C NMR (see Tables 1 and 2); HR MALDI-TOF-MS m/z
962.4260 [M + Na]+ (calcd for C41H65N9NaO14S, 962.4260). Retention
time of AA Marfey’s derivatives: L-Arg 18.3 min (D-Arg 18.5 min),
L-Thr 25.1 min (D-Thr 28.5 min), L-Glu 25.9 min (D-Glu 27.4 min),
L-Ile 41.2 min (D-Ile 44.9 min), and L-NMe-Phe 42.9 min. Retention
time of D-glyceric acid on the chiral column 3.7 min (L-glyceric acid
3.3 min).
Protease Inhibition Assays. Trypsin, thrombin, chymotrypsin, and
elastase were purchased from Sigma Chemical Co. Trypsin (1 mg/
mL) and chymotrypsin (10 mg/mL) were dissolved in 0.05 M Tris-
HCl/100 mM NaCl/1 mM CaCl2, pH 7.5 buffer solution. Benzoyl-L-
arginine-p-nitroanilide hydrochloride (BAPNA), the trypsin substrate,
was dissolved in a solution of 1:9 DMSO/Tris-buffer (0.85 g/mL). Suc-
Gly-Gly-p-nitroanilide (SGGPNA), the substrate for chymotrypsin, was
dissolved in Tris buffer (1 mg/mL). Test samples were dissolved in
DMSO (1 mg/mL). A 100 µL buffer solution, 10 µL of enzyme solution,
and 10 µL of sample solution were added to each microtiter plate well
and preincubated at 37 °C for 10 min. Substrate solution (10 µL) was
added, and the kinetics of the reaction were measured at 405 nm, 37
°C, for 30 min. Elastase (75 mg/mL) and thrombin (0.5 g/mL) were
dissolved in 0.2 M Tris-HCl, pH 8 buffer solution. Z-Gly-Pro-Arg-
4MꢀNA-acetate salt, the thrombin substrate, was dissolved in Tris buffer
(0.5 mg/mL). N-Suc-Ala-Ala-Ala-p-nitroanilide, the elastase substrate,
was dissolved in Tris buffer (1 mg/mL). The test samples were dissolved
in DMSO (1 mg/mL). For elastase, 150 µL of buffer solution, 10 µL
of enzyme solution, and 10 µL of sample solution were added to each
microtiter plate well and preincubated at 30 °C for 20 min. Substrate
solution (30 µL) was added, and the kinetics of the reaction were
measured at 405 nm, 37 °C, for 20 min. For thrombin, 170 µL of buffer
solution, 10 µL of enzyme solution, and 10 µL of sample solution were
added to each microtiter plate well and preincubated at 25 °C for 5
min. Substrate solution (10 µL) was added, and the kinetics of the
reaction were measured at 405 nm, 37 °C, for 20 min.
Micropeptin MZ925 (4): amorphous, white solid; [R]22 -89 (c
D
0.13, MeOH); UV (MeOH) λmax (log ε) 203 (5.04), 254 (3.00) nm; 1H
and 13C NMR (see Tables 1 and 2); HR MALDI-TOF-MS m/z 846.4741
[M + H - SO3]+ (calcd for C40H64N9O11, 846.4720). Retention time
of AA Marfey’s derivatives: L-Arg 17.2 min (D-Arg 17.6 min), L-Thr
22.9 min (D-Thr 26.4 min), L-Glu 24.7 min (D-Glu 26.5 min), L-Ile
39.4 min (D-Ile 43.5 min), and L-NMe-Phe 41.3 min. Retention time
of D-glyceric acid on the chiral column 3.8 min (L-glyceric acid 3.4
min).
Micropeptin MZ939B (5): amorphous, white solid; [R]23D -80 (c
1
0.2, MeOH); UV (MeOH) λmax (log ε) 203 (4.07), 252 (2.83) nm; H
and 13C NMR (see Tables 1 and 2); HR-ESIMS m/z 940.4472 [M +
H]+ (calcd for C41H66N9O14S, 940.4450). Retention time of AA
Marfey’s derivatives: L-Arg 18.5 min (D-Arg 18.6 min), L-Thr 23.4
min (D-Thr 26.8 min), L-Glu 26.2 min (D-Glu 27.7 min), L-Ile 40.6
min (D-Ile 46.0 min), and L-NMe-Phe 41.8 min. Retention time of
D-glyceric acid on the chiral column 3.7 min (L-glyceric acid 3.3 min).
Micropeptin MZ1019 (6): amorphous, white solid; [R]23 -44 (c
D
0.18, MeOH); UV (MeOH) λmax (log ε) 202 (4.13), 227 (3.66), 277
1
(3.03) nm; H and 13C NMR (see Tables 1 and 2); HR-ESIMS m/z
962.4274 [M + Na - SO3]+ (calcd for C41H65N9NaO14S, 962.4269),
m/z 1018.3912 [M - H]- (calcd for C41H64N9O17S2, 1018.3862).
Retention time of AA Marfey’s derivatives: L-Arg 18.0 min (D-Arg
18.2 min), L-Thr 22.8 min (D-Thr 26.2 min), L-Glu 24.7 min (D-Glu
26.5 min), L-Ile 39.4 min (D-Ile 43.3 min), and L-NMe-Phe 41.4 min.
Retention time of D-glyceric acid on the chiral column 3.7 min (L-
glyceric acid 3.4 min).
Micropeptin MZ771 (7): amorphous, white solid; [R]23 -176 (c
Acknowledgment. We thank A. Sacher and K. Shereshevsky, The
Mass Spectrometry Laboratory of The Maiman Institute for Proteome
Research of Tel-Aviv University, for the MALDI mass spectra
measurements and N. Tal, the Mass Spectrometry Facility of the School
of Chemistry, Tel-Aviv University, for the measurements of the HR
D
0.05, MeOH); UV (MeOH) λmax (log ε) 202 (3.58), 248 (2.14) nm; 1H
and 13C NMR (see Tables 1 and 2); HR MALDI-TOF-MS m/z 772.4764
[M + H]+ (calcd for C38H62N9O8, 772.4716). Retention time of AA
Marfey’s derivatives: L-Arg 18.5 min (D-Arg 18.7 min), L-Thr 23.4