1648 J ournal of Medicinal Chemistry, 1998, Vol. 41, No. 10
Kozikowski et al.
with brine, dried over MgSO4, filtered, and concentrated.
Column chromatography (SiO2, 50% EtOAc/hexane) afforded
3H), 4.82 (br s, NH2); 13C NMR (methanol-d4) δ 36.9 (CH2),
41.3 (CH2), 42.9 (CH), 52.4 (CH3), 53.0 (CH3), 53.9 (CH), 55.5
(CH), 64.5 (C), 174.6 (CO), 176.9 (CO).
2 (12.3 g, 58%) as a colorless oil: [R]25 -0.4° (c 2.1, CHCl3);
D
1H NMR (CDCl3) δ 2.52 (dd, J ) 14.1 and 7.2 Hz, 1H), 2.78
(dd, J ) 13.8 and 7.8 Hz, 1H), 3.51 (br s, 1H), 3.75 (s, 3H),
3.88-3.76 (m, 1H), 4.18-4.07 (m, 1H), 5.15-5.01 (m, 4H),
5.68-5.52 (m, 1H), 5.79 (br s, 1H), 7.37-7.29 (m, 5H); 13C NMR
(CDCl3) δ 36.7, 52.7, 64.9, 65.1, 66.7, 119.9, 127.9, 128.0, 128.4,
(1S,2S,4S,5S)-Dim eth yl 2-a m in obicyclo[2.1.1]h exa n e-
2,5-d ica r boxyla te (5c): yield 64 mg (20%); Rf 0.80 (EtOAc/
MeOH, 8/1); 1H NMR (CDCl3) δ 1.07 (d, J ) 7.5 Hz, H6R), 1.46-
1.56 (m, H6â), 1.67 (br s, NH2), 1.97 (dd, J ) 2.1 and 11.4 Hz,
H
3â), 2.35 (d, J ) 11.4 Hz, H3R), 2.61 (m, H5), 2.64-2.74 (m,
131.0, 136.0, 155.2, 172.3; IR (film) 3407, 1724 cm-1
.
H4), 2.9-3.0 (dt, J ) 2.7 and 6.9 Hz, H1), 3.60 (s, 3H), 3.71 (s,
3H); 13C NMR (CDCl3) δ 36.4, 36.6, 39.7, 49.4, 50.9, 52.0, 52.6,
63.3, 172.4, 176.4.
(2S)-Meth yl 4-Allyl-4-[(ben zyloxycar bon yl)am in o]glu ta-
con a te (3). A solution of DMSO (0.57 mL, 7.8 mmol) in CH2-
Cl2 (8 mL) was added to a solution of oxalyl chloride (0.51 mL,
5.9 mmol) in CH2Cl2 (4 mL) over 15 min. Alcohol 2 (1.15 g,
3.95 mmol) in CH2Cl2 (20 mL) was added over 10 min. After
an additional 10 min of stirring, Et3N (2.73 mL, 19.6 mmol)
in CH2Cl2 (15 mL) was added over 10 min and the temperature
was maintained between -60 and -70 °C for 30 min. The
reaction mixture was quenched with a saturated solution of
NH4Cl (30 mL) and extracted with CH2Cl2 (5 × 40 mL). The
combined organic fractions were dried over MgSO4, filtered,
and concentrated. The residue was dissolved in CH2Cl2 (45
mL), methyl (triphenylphosphoranylidene)acetate (1.97 g, 5.88
mmol) was added, and the mixture was stirred at room
temperature for 4 h. The reaction mixture was then poured
into H2O and extracted with CH2Cl2 (5 × 40 mL). The
combined organic phases were dried over MgSO4, filtered, and
concentrated. Purification of the residue by column chroma-
tography (SiO2, 33% EtOAc/hexane) afforded compound 3 (1.36
g, quant) as a colorless oil: [R]25D -2.2° (c 1.6, CHCl3); 1H NMR
(CDCl3) δ 2.67 (dd, J ) 13.5, 7.5 Hz, 1H), 2.89 (dd, J ) 13.2,
6.6 Hz, 1H), 3.78 (s, 3H), 3.74 (s, 3H), 5.20-5.00 (m, 4H), 5.65-
5.50 (m, 1H), 5.73 (br s, 1H), 5.98 (d, J ) 15.9 Hz, 1H), 7.16
(d, J ) 15.9 Hz, 1H), 7.41-7.27 (m, 5H); 13C NMR (CDCl3) δ
40.3, 51.7, 53.3, 63.2, 66.9, 120.9, 121.5, 128.1, 128.2, 128.5,
130.4, 136.0, 145.3, 154.2, 166.2, 170.8; IR (film) 3352, 1724
(1R,2S,4R,5S)-Dim eth yl 2-a m in obicyclo[2.1.1]h exa n e-
2,5-d ica r boxyla te (5d ). Compound 4d (95 mg, 0.27 mmol)
and 10% Pd/C (15 mg) were stirred in MeOH (5 mL) under an
atmosphere of H2. After 3 h, the reaction mixture was filtered
and concentrated. Purification of the residue by silica gel
column chromatography (MeOH/EtOAc, 1/9) afforded com-
pound 5d (58 mg, 100%) as a colorless oil: 1H NMR (CDCl3) δ
1.46 (d, J ) 11.7 Hz, 1H), 1.5-1.6 (m, 1H), 1.62 (d, J ) 7.2
Hz, 1H), 1.85 (br s, 2H), 2.63-2.70 (m, 2H), 2.82 (dd, J ) 1.8
and 11.7 Hz, 1H), 2.87-2.94 (m, 1H), 3.56 (s, 3H), 3.69 (s, 3H).
Com p ou n d s 6a -d . Compound 5a -d were stirred with 6
N HCl at reflux for 1 h. Evaporation afforded compounds
6a -d .
(1S,2S,4S,5S)-2-Am in ob icyclo[2.1.1]h exa n e-2,5-d ica r -
boxylic a cid h yd r och lor id e (6a ): [R]25D +15° (c 0.5, MeOH);
1
mp >220 °C; H NMR (D2O) δ 1.87 (t, J ) 8.7 Hz, H6â), 2.05
(br d, J ) 12.6 Hz, H3â), 2.30-2.40 (m, H6â), 2.65 (d, J ) 12.6
Hz, H3R), 2.80-2.90 (m, H4), 2.92 (d, J ) 8.7 Hz, H5), 3.05-
3.20 (dd, J ) 2.1 and 6.9 Hz, H1); 13C NMR (D2O) δ 36.8 (CH2),
37.5 (CH2), 41.6 (CH), 51.1 (CH), 53.7 (CH), 64.0 (C), 173.0
(CO), 175.6 (CO). Anal. (C8H11NO4‚HCl‚0.5H2O) C, H, N.
(1R,2S,4R,5R)-2-Am in obicyclo[2.1.1]h exa n e-2,5-d ica r -
boxylic a cid h yd r och lor id e (6b): [R]25 -7.0° (c 0.5, H2O);
D
1
mp >220 °C; H NMR (D2O) δ 1.65 (t, J ) 9.0 Hz, H6R), 2.01
cm-1
.
(d, J ) 12.6 Hz, H3R), 2.46 (dt, J ) 2.4 and 9.6 Hz, H6â), 2.63
(br d, 12.9 Hz, H3â), 2.80-2.90 (m, H4), 3.08 (dd, J ) 2.4 and
6.9 Hz, H1), 3.15 (d, J ) 8.7 Hz, H5); 13C NMR (D2O) δ
36.6 (CH2), 38.0 (CH2), 41.5 (CH), 51.0 (CH), 53.7 (CH), 63.6
(C), 173.4 (CO), 176.0 (CO). Anal. (C8H11NO4‚HCl‚0.5H2O)
C, H, N.
Dim eth yl 2-[(Ben zyloxyca r bon yl)a m in o]bicyclo[2.1.1]-
h exa n e-2,5-d ica r boxyla te (4a -d ). Diene 3 (3.84 g, 11.5
mmol) and acetophenone (0.40 mL) in benzene (400 mL) were
first purged with argon and then irradiated with a Hanovia
450 W medium-pressure mercury lamp through a Pyrex filter.
After 4.5 d, the reaction mixture was evaporated and the
residue purified by column chromatography (SiO2, 33% EtOAc/
hexane) to afford a mixture of cis- and trans-3 (Rf 0.8, 50%
EtOAc/hexane, 1.16 g, 30%), 4a -c (Rf 0.65, 50% EtOAc/
hexane, 1.22 g, 32%), and 4d (Rf 0.53, 50% EtOAc/hexane, 197
(1S,2S,4S,5R)-2-Am in obicyclo[2.1.1]h exa n e-2,5-d ica r -
boxylic a cid h yd r och lor id e (6c): [R]25D -5.4° (c 0.25, H2O);
1
mp 198-200 °C; H NMR (D2O) δ 1.51 (d, J ) 8.1 Hz, H6R),
1.65-1.75 (m, H6â), 2.02 (dd, J ) 2.7 and 13.2 Hz, H3â), 2.70
(br d, J ) 13.2 Hz, H3R), 2.90-3.00 (m, H4), 3.06 (br s, H5),
3.10-3.20 (m, H1); 13C NMR (D2O) δ 34.3 (CH2), 36.3 (CH2),
43.2 (CH), 50.1 (CH), 52.0 (CH), 63.6 (C), 173.0 (CO), 177.0
(CO). Anal. (C8H11NO4‚HCl‚0.5H2O) C, H, N.
mg, 5%) as colorless oils: [R]25 +21° (c 0.7, CHCl3); 1H NMR
D
(CDCl3) δ 1.43 (d, J ) 7.2 Hz, H6R), 1.50-1.53 (m, H6â), 1.77
(br d, J ) 12.3 Hz, H3R), 2.67 (br s, H5), 2.72-2.80 (m, H4),
3.06 (dd, J ) 1.8 and 12.3 Hz, H3â), 3.20 (br s, H1), 3.60 (br s,
6H), 5.07 (s, CH2), 5.63 (br s, NH), 7.33-7.27 (m, 5H); 13C NMR
(CDCl3) δ 36.1, 37.1, 39.8, 49.6, 51.2, 51.3, 52.2, 63.3, 66.8,
128.0, 128.4, 136.1, 155.22, 170.5, 172.4.
(1R,2S,4R,5S)-2-Am in obicyclo[2.1.1]h exa n e-2,5-d ica r -
boxylic a cid h yd r och lor id e (6d ): [R]25 +6° (c 0.25, H2O);
D
1
mp (dec) 205 °C; H NMR (D2O) δ 1.45 (d, J ) 8.7 Hz, H6R),
1.80-1.90 (m, H6â), 1.95 (br d, J ) 13.2 Hz, H3R), 2.75-2.90
(m, H4 and H3â), 2.97 (br s, H5), 3.20-3.30 (m, H1). Anal.
(C8H11NO4‚HCl‚0.5H2O) C, H, N.
Com p ou n d s 5a -c. Compounds 4a -c (520 mg, 1.50 mmol)
and 10% Pd/C (80 mg) were stirred in MeOH (25 mL) under
an atmosphere of H2. After 3 h, the reaction mixture was
filtered and concentrated. Silica gel column chromatography
(MeOH/EtOAc, 1/9) of the crude mixture led to the separation
of the three products 5a -c.
Molecu la r Mod elin g. All molecular modeling studies were
conducted using the QUANTA program,23 and all molecular
mechanics and molecular dynamics simulations were per-
formed using the CHARMM program.24 To access the different
conformations that may be adopted by each of these ligands,
high-temperature molecular dynamics simulations were per-
formed as follows: (1) the temperature of the system was
raised to 1000 from 0 K within 1 ps; (2) the system was then
equilibrated for 30 ps at 1000 K; and (3) the system was finally
simulated for 50 ps. Trajectories were recorded every 0.1 ps
in the final simulation stage and subsequently minimized for
5000 steps, or until convergence, defined as an energy gradient
tolerance of 0.001 kcal mol-1 Å-1, using an adopted-basis
Newton-Raphson algorithm, as implemented in the CHARMM
program. The dielectric constant was set to 80 to simulate
an aqueous environment. The carboxyl groups in these ligands
was set to be deprotonated and the amine groups to be
protonated, as expected under physiological conditions. These
minimized structures were clustered using the Cluster Analy-
(1R,2S,4R,5R)-Dim eth yl 2-a m in obicyclo[2.1.1]h exa n e-
2,5-d ica r boxyla te (5a ): yield 65 mg (20%); Rf 0.6 (EtOAc/
MeOH, 8/1); 1H NMR (CDCl3) δ 1.29 (t, J ) 8.1 Hz, H6R), 1.54
(dd, J ) 2.4 and 11.7 Hz, H3â), 1.78 (br s, NH2), 2.20-2.30 (m,
H
6â), 2.47 (d, J ) 11.7 Hz, H3R), 2.64-2.74 (m, H4), 2.77 (dd, J
) 2.7 and 6.9 Hz, H1), 3.01 (d, J ) 7.8 Hz, H5), 3.73 (s, 3H),
3.74 (s, 3H); 13C NMR (CDCl3) δ 37.6 (CH2), 39.9 (CH2), 41.6
(CH), 51.6 (CH3), 51.7 (CH3), 52.1 (CH), 52.8 (CH), 63.3 (C),
173.7 (CO), 176.1 (CO).
(1S,2S,4S,5R)-Dim eth yl 2-a m in obicyclo[2.1.1]h exa n e-
2,5-d ica r boxyla te (5b): yield 156 mg (49%); Rf 0.49 (EtOAc/
1
MeOH, 8/1); H NMR (methanol-d4) δ 1.54 (dd, J ) 0.9 and
12.0 Hz, H3R), 1.72 (t, J ) 7.8 Hz, H6R), 2.26 (ddd, J ) 2.7, 5.4
and 8.1 Hz, H6â), 2.48-2.56 (m, H3â and H5), 2.62-2.68 (m,
H4), 2.72 (dd, J ) 2.4 and 6.9 Hz, H1), 3.68 (s, 3H), 3.76 (s,