Benzaldehyde thiosemicarbazone derivatives against replicating and nonreplicating Mycobacterium. . .
1 mM sodium pyruvate (Fisher)) and differentiated into
macrophage-like cells using 80 nM PMA (Sigma-Aldrich)
overnight at 37 °C, 5% CO2. THP-1 cells were infected with a
luminescent strain of H37Rv (which constitutively expresses
luxABCDE) at a multiplicity of infection of 1 and incubated
overnight at 37 °C, 5% CO2. Infected cells were recovered
using Accutase/EDTA solution (Accutase, 5 mM EDTA),
washed twice with PBS (Fisher) to remove extracellular
bacteria and seeded into assay plates. Compound dilutions
were added to a final DMSO concentration of 0.5%.
Assay plates were incubated for 72 h at 37 °C, 5% CO2.
Each run included isoniazid (Sigma-Aldrich) as a control.
Relative luminescent units (RLU) were measured using a
Biotek Synergy 2 plate reader. The dose response curve
was fitted using the Levenberg–Marquardt algorithm.
The IC50 and IC90 were defined as the compound con-
centrations that produced 50% and 90% inhibition of growth,
respectively.
Quality control
The A-side contained 100 μM Lucifer yellow (Sigma) in
transport buffer (1.98 g L−1 glucose (Teknova) in 10 mM
HEPES (Sigma), 1× Hank’s Balanced Salt Solution (Lonza)
pH 6.5), and the B-side contained transport buffer (1.98 g L−1
glucose (Teknova) in 10 mM HEPES (Sigma), 1× Hank’s
Balanced Salt Solution (Lonza) pH 7.4). Caco-2 cells were
incubated with these buffers for either 1 or 2 h, and the
receiver side buffer was removed for analysis by LC-MS/MS.
Aliquots of the cell buffers were analyzed by fluorescence to
determine the transport of the impermeable dye Lucifer yel-
low to verify the Caco-2 cell monolayers were properly
formed. Any deviations from control values were reported.
Data are expressed as permeability, Papp = (dQ/dt)/(C0/A), in
which dQ/dt is the rate of permeation, C0 is the initial con-
centration of compound, and A is the area of monolayer.
HepG2 cytotoxicity
Plasma protein binding
The cytotoxicity of compounds towards eukaryotic cells was
determined using the human liver cells (HepG2) [26–29].
The cytotoxicity of compounds was determined by mea-
suring HepG2 (ATCC) cell viability growth after 3 days in
the presence of test compounds. Compounds were prepared
as 10-point three-fold serial dilutions in DMSO. The highest
concentration of compound tested was 100 µM where
compounds were soluble in DMSO at 10 mM. HepG2
cells were cultured in complete DMEM (DMEM medium
(Invitrogen), 1× penicillin–streptomycin solution (Fisher),
2 mM Corning Glutogro supplement (Fisher), 1 mM sodium
pyruvate (Fisher), 10% v/v Fetal Bovine Serum (Fisher)),
inoculated into 384-well assay plates containing compounds
and incubated for 24 h at 37 °C, 5% CO2. Compounds were
added and cells were cultured for a further 72 h. The
final DMSO concentration was 1%. Cell viability was
determined using the CellTiter-Glo® Luminescent Cell
Viability Assay (Promega) and measuring RLU. The dose
response curve was fitted using the Levenberg–Marquardt
algorithm. The IC50 was defined as the compound con-
centration that produced 50% decrease in viable cells. Each
run included staurosporine (Santa Cruz Biotechnology) as a
control.
Plasma protein binding for compounds 13 and 20 was
determined by equilibrium dialysis [20]. Compounds were
added to human plasma (Bioreclamation Inc.) at a fixed
concentration of 5 µM. The mixture was dialyzed in a RED
device (Rapid Equilibrium Dialysis, Pierce) against PBS
and incubated on an orbital shaker for 4 h at 37 °C. Aliquots
from plasma and PBS sides were collected; an equal volume
of PBS was added to the plasma sample, and an equal
volume of plasma was added to the PBS sample. Three
volumes of methanol (containing the internal binding
standard propranolol (Sigma)) was added to precipitate the
proteins and release the compound. Samples were cen-
trifuged, the supernatant was recovered and analyzed by
LC-MS/MS. Each experiment included warfarin (Sigma) as
a high-binding control.
Caco-2 cell permeability
The permeability of test compounds was assessed using a
Caco-2 cell monolayer [21–25]. Caco-2 cells (ATCC) were
trypsinized, resuspended in medium, and dispensed into a
Millipore 96-well Caco-2 plate. The cells were allowed to
grow and differentiate for 3 weeks, with feeding at 2-day
intervals. For apical to basolateral (A→B) permeability, the
compound was added to the apical (A) side and amount of
permeation was determined on the basolateral (B) side; for
basolateral to apical (B→A) permeability, the compound
was added to the B side and the amount of permeation was
determined on the A side. Each experiment included the
control compounds atenolol (MP Biomedicals) (low per-
meability), propranolol (Sigma) (high permeability), and
talinolol (TRC) (P-gp efflux control).
Results and discussion
In order to find novel antituberculosis compounds, we have
performed phenotypic screening of the library containing
about 1000 compounds from different chemical classes
against M. tuberculosis H37Rv strain. As a result, a series of
benzaldehyde thiosemicarbazone derivatives possessing
high activity toward actively replicating M. tuberculosis