Docetaxel Analogues with High Tubulin Activity
Journal of Medicinal Chemistry, 2004, Vol. 47, No. 24 5943
(m, 4H), 2.48-2.60 (m, 1H), 2.60 (s, 3H), 3.23-3.50 (m, 2H),
3.78-3.91 (m, 1H), 4.14-4.35 (m, 2H), 4.35-4.48 (m, 1H),
4.53-4.64 (br s, 1H), 4.85-4.95 (m, 1H), 5.10-5.55 (m, 2H),
were analyzed using Sybyl 6.8 software, and superimposition
of conformers was based on the backbone atoms of the taxane
core.
Docking experiments on compounds 4b-d-E were realized
using the DOCK software of Sybyl 6.8 with Tripos force field
for minimization.
3
3
5.56-5.85 (m, 3H), 6.24 (d, JH,H ) 9.0 Hz, 1H), 6.40 (t, JH,H
) 9.0 Hz, 1H), 7.22-7.49 (m, 7H), 7.82-8.10 (m, 2H). 13C NMR
(75 MHz, CDCl3) δ (E-isomer) ) -5.9-5.2, 5.4, 6.1, 7.0, 7.1,
10.7, 14.1, 18.3, 21.2, 22.8, 23.3, 25.6, 26.8, 27.1, 30.1, 34.8,
35.7, 37.6, 39.4, 43.5, 47.8, 54.7, 58.7, 70.9, 73.0, 75.2, 75.4,
75.6, 77.0, 79.2, 81.3, 84.3, 126.6, 127.7, 128.7, 129.7, 130.1,
130.5, 133.7, 134.4, 137.7, 138.8, 141.7, 167.6, 171.1, 171.4,
172.2, 205.5. Modifications for the 13C NMR chemical shifts
for the Z-isomer: δ (δ E-isomer) ) 32.3 (39.4), 132.4, 132.6
(130.1, 130.5), 142.8 (141.7). MS (ESI+): m/z 1194 [M + Na+].
Acknowledgment. The authors thank Dr Alain
Commerc¸on (Aventis-Pharma) for a gift of docetaxel.
Christiane Gaspard and Je´roˆme Bignon are acknowl-
edged for cytotoxicity evaluations, Jean-Franc¸ois Gal-
lard and Marie-The´re`se Martin for performing NMR
spectra, and Vincent Gue´rineau for high-resolution
mass spectra.
In the same manner, 9a,b,d were synthesized, see the
Supporting Information
General Procedure for Removal of the Silyl Protect-
ing Groups. A typical procedure is described for the synthesis
of macrocyclic taxoid 4c. To a cooled solution of 9c (25 mg,
0.021 mmol) in pyridine-acetonitrile (7/93, 0.825 mL) was
added dropwise HF/pyridine (70%, 120 µL, 0.85 mmol, 40
equiv) at 0 °C. The solution was stirred for 1 h at 0 °C and
then warmed to room temperature and stirred for additional
6 h at room temperature. The reaction was quenched by
addition of saturated aqueous sodium hydrogenocarbonate (50
mL), and the aqueous layer was extracted three times with
EtOAc (50 mL). After standard workup the crude residue was
purified by silica gel chromatography (CH2Cl2/MeOH, 93/7) to
afford pure 4c-Z (4.3 mg, 24%) and 4c-E (8.9 mg, 50%) as white
amorphous solids.
Supporting Information Available: Experimental de-
tails and characterization data for new compounds 4a,b,d,
5a,b,d, 8p,o, 10b-d, and 11a,b,d. This material is available
References
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C. W. Mitscher, L. A. A “Hydrophobic Collapse” of Taxol and
Taxotere Solution Conformations in Mixture of Water and
Organis Solvent. J. Am. Chem. Soc. 1993, 115, 11650-11651.
(b) Williams, H. J.; Scott, A. I.; Dieden, R. A.; Swindell, C. S.;
Chirlian, L. E.; Francl, M. M.; Heerding, J. M.; Krausss, N. E.
NMR and Molecular Modelling Study of the Conformation of
Taxol and its Side Chain Methyl Ester in Aqueous and Non-
Aqueous Solution. Tetrahedron 1993, 49, 6545-6560.
4c-E: 1H NMR (300 MHz, CDCl3) δ ) 1.14 (s, 3H), 1.27 (s,
3H), 1.27-1.43 (m, 2H), 1.51-1.65 (m, 2H), 1.78 (s, 3H), 1.88
(s, 3H), 1.88-2.10 (m, 3H), 2.13-2.38 (m, 4H), 2.48 (s, 3H),
3
2.53-2.69 (m, 1H), 3.13 (br s, 1H), 3.38 (d, JH,H ) 5.5 Hz,
3
2H), 3.91 (d, JH,H ) 7.0 Hz, 1H), 4.15-4.30 (m, 2H), 4.34 (d,
3
3JH,H ) 8.5 Hz, 1H), 4.67 (br.s, 1H), 4.94 (d, JH,H ) 9.0 Hz,
1H), 5.18 (s, 1H), 5.24-5.37 (m, 2H), 5.62-5.83 (m, 3H), 6.24
(t, 3JH,H ) 9.0 Hz, 1H), 6.36 (d, 3JH,H ) 9.5 Hz, 1H), 7.30-7.47
(m, 7H), 7.85 (br s, 1H), 8.02 (s, 1H). 13C NMR (62.5 MHz,
CDCl3) δ ) 10.1, 14.6, 20.9, 22.6, 23.5, 26.8, 27.4, 30.8, 35.5,
36.2, 37.2, 39.8, 43.2, 46.5, 53.5, 57.7, 72.2, 72.4, 73.0, 74.5,
74.9, 76.6, 79.2, 81.1, 84.3, 127.1, 128.2, 128.7, 129.0, 129.7,
130.0, 130.8, 134.5, 136.1, 138.3, 141.5, 167.3, 170.7, 172.3,
172.8, 211.5. HRMS (MALDI-TOF): m/z calcd for C46H55-
NO13.Na+ 852.3571, found 852.3587 (∆ ) -1.9 ppm).
4c-Z: 1H NMR (300 MHz, CDCl3) δ ) 1.14 (s, 3H), 1.29 (s,
3H), 1.29-1.49 (m, 2H), 1.50-1.72 (m, 2H), 1.73-1.96 (m, 3H),
1.80 (s, 3H), 1.95 (s, 3H), 2.14-2.38 (m, 3H), 2.40-2.53 (m,
1H), 2.46 (s, 3H), 2.53-2.68 (m, 1H), 3.22 (br s, 1H), 3.35-
3.50 (m, 1H), 3.77-3.90 (m, 1H), 3.94 (d, 3JH,H ) 6.5 Hz, 1H),
3
4.17-4.40 (m, 3H), 4.74 (br.s, 1H), 4.92 (d, JH,H ) 10.0 Hz,
1H), 5.19 (s, 1H), 5.31 (s, 1H), 5.57-5.75 (m, 2H), 5.75-5.88
3
3
(m, 2H), 6.16 (d, JH,H ) 9.5 Hz, 1H), 6.43 (t, JH,H ) 9.0 Hz,
3
1H), 7.30-7.53 (m, 7H), 7.89 (d, JH,H ) 6.5 Hz, 1H), 8.07 (s,
1H). 13C NMR (62.5 MHz, CDCl3) δ ) 10.2, 14.4, 21.4, 22.9,
26.2, 26.7, 27.7, 29.7, 32.4, 35.5, 36.4, 37.0, 43.1, 46.4, 53.5,
57.6, 72.0, 72.4, 72.7, 74.4, 75.3, 77.3, 79.4, 81.0, 84.3, 126.8,
127.3, 128.1, 128.8, 129.4, 130.1, 132.4, 132.8, 135.9, 138.4,
142.1, 167.3, 170.8, 172.1, 173.2, 211.8. HRMS (MALDI-
TOF): m/z calcd for C46H55NO13.Na+ 852.3571, found 852.3556
(∆ ) 1.8 ppm).
In the same manner macrocylic taxoids 4a,b,d were syn-
thesized as the acyclic taxoids 10b-d. For experimental details
and spectral data see the Supporting Information.
Computational Procedures. All calculations were per-
formed on a SiliconGraphics Indigo2 Extreme workstation. All
modelizations were done using Sybyl 6.8 software. The MMFF94
force field was used for minimization and partial charge
calculations, a dielectric constant of 1.0 or 78 being employed.
In all cases A, B, C, and D rings of the taxoids were considered
as an aggregate. Compounds 4b-d were subjected to an
unrestrained molecular dynamics simulation at 1600 K for
20 000 fs. Conformations were sampled every 100 fs during
the simulation. Each of these conformers was minimized and
compared with others with a RMS of 0.3 Å. The structures
(9) Gue´ritte-Voegelein, F.; Gue´nard, D.;. Mangatal, L.; Potier, P.;
Guilhem, J.; Ce´sario, M.; Pascard, C. Structure of a Synthetic
Taxol Precursor: N-tert-Butoxycarbonyl-10-deacetyl-N-deben-
zoyltaxol. Acta Crystallogr. C 1990, 46, 781-784.
(10) Dubois, J.; Gue´nard, D.; Gue´ritte-Voegelein, F.; Guedira, N.;
Potier, P.; Gillet, B.; Beloeil, J.-C. Conformation of Taxotere and
Analogues Determined by NMR Spectroscopy and Molecular
Modeling Studies. Tetrahedron 1993, 49, 6533-6544.
(11) Snyder, J. P.; Nettles, J. H.; Cornett, B.; Downing, K. H.;
Nogales, E. The Binding Conformation of Taxol in â-Tubulin: A
Model Based on Electron Crystallographic Density. Proc. Natl.
Acad. Sci. U.S.A. 2001, 98, 5312-5316.