D. J. Witter et al. / Bioorg. Med. Chem. Lett. 17 (2007) 4562–4567
4567
5. HDAC activity (enzymatic) was evaluated with epitope-
tagged human HDAC1 complex immuno-purified from
stably expressing mammalian cells and substrate from
Biomol Research Laboratories, Inc., Plymouth Meeting,
PA. Cell-based HDAC activity was studied in a MTS
assay using murine erythroleukemia cells (SC-9) incubated
with vehicle or increasing concentrations of compound for
48 h. For full details, see: Miller, T. A.; Witter, D. J.;
Belvedere, S. Preparation of thiophene and benzothioph-
ene hydroxamic acid derivatives as histone deacetylase
inhibitors. WO2005034880, 2005.
10. Horton, D. A.; Bourne, G. T.; Smythe, M. L. Chem. Rev.
2003, 103, 893.
11. General experimental for acylated 6-amino-benzothioph-
enes. To a solution of 6-amino-benzo[b]thiophene-2-car-
boxylic acid methyl ester (75 mg, 0.36 mmol) and NMM
(51.7 lL, 0.47 mmol) in THF/CH2Cl2 (2/1 mL) was added
acid chloride (0.434 mmol). After 24 h, the solvent was
removed. To the resultant mixture were added DMA
(2 mL) and NH2OH (50% aq, 1 mL). The solution was
stirred until the disappearance of starting material as
indicated by LC/MS. After removal of solvent, MeOH/
H2O was added until a precipitate formed. The solid was
filtered yielding the desired amide (13b; 65% yield). 1H
NMR (DMSO-d6) d 11.38 (br s, 1H), 10.42 (br s, 1H), 9.21
(br s, 1H), 8.38 (s, 1H), 7.90–7.75 (m, 2H), 7.50–7.15 (m,
6H), 3.65 (s, 2H). MS (EI): calcd (MH+) 327.07, exp
(MH+) 327.28. Additional experimental details and spec-
tral data can be found in Ref. 5.
6. Structure–activity relationships of additional scaffolds will
be highlighted in due course.
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