388 Journal of Medicinal Chemistry, 2006, Vol. 49, No. 1
He et al.
brought to room temperature and further stirred for 1 h. Following
dilution with CH2Cl2 (38 mL), the excess HF was quenched by
stirring for an additional 1 h with CaCO3 (0.95 g) and water (5
mL). The mixture was dried in vacuo and subsequently purified
by silica gel column chromatography (CHCl3/MeOH/NH4OH at
5:1:0.5) to yield 17 (0.9 g, 60% yield). 1H NMR (400 MHz, DMSO-
d6) δ 7.59 (bs, 2H), 6.94-6.90 (m, 3H), 6.81 (d, J ) 8.0 Hz, 1H),
6.03 (s, 2H), 4.06 (s, 2H); MS m/z 288.0 (M + H)+.
2-Fluoro-8-(6-iodo-benzo[1,3]dioxol-5-ylmethyl)adenine (18).
A solution of 17 (50 mg, 0.17 mmol), NIS (94 mg, 0.4 mmol), and
TFA (20 mg, 13.4 µL, 0.17 mmol) in CH2Cl2 (200 µL) was stirred
at room temperature overnight. After solvent removal, the desired
product 18 (6 mg, 8.5%) was purified by silica gel column
chromatography (CHCl3/EtOAc at 9:1 to 4:6). 1H NMR (400 MHz,
DMSO-d6) δ 7.6 (bs, 2H), 7.38 (s, 1H), 6.95 (s, 1H), 6.03 (s, 2H),
4.12 (s, 2H); MS m/z 414.1 (M + H)+.
2-Fluoro-8-(6-bromo-benzo[1,3]dioxol-5-ylmethyl)adenine (19).
A solution of 17 (45 mg, 0.157 mmol) and NBS (56 mg, 0.314
mmol) in DMF (0.5 mL) was stirred at room temperature for 1.5
h. Following solvent removal, product (20 mg, 34.8%) was collected
through silica gel column purification (CHCl3/EtOAc at 9:1 to 4:6).
1H NMR (400 MHz, acetone-d6) δ 7.51 (bs, 2H), 7.21 (s, 1H),
6.98 (s, 1H), 6.06 (s, 2H), 4.13 (s, 2H); MS m/z 366.0 (M + H)+.
2-Fluoro-8-(6-iodo-benzo[1,3]dioxol-5-ylmethyl)-9-(3-iso-
propylamino-prop yl)adenine (25). A solution of 18 (300 mg,
0.726 mmol), Cs2CO3 (285 mg, 0.87 mmol), and 1,3-dibromopro-
pane (370 µL, 3.63 mmol) in anhydrous DMF (5 mL) was stirred
at 50 °C for 2 h. Following solvent removal, product (330 mg,
85%) was collected through silica gel column purification (CHCl3
then EtOAc/hexanes/CHCl3/i-PrOH at 4:2:4:0.4). MS m/z 534.0 (M
+ H)+. To this product, i-PrNH2 (10 mL) was added in excess,
and the resulting solution was stirred at room temperature for 1 h.
Excess amine was removed and product (230 mg, 75%) collected
through silica gel column purification (CHCl3/EtOAc/i-PrOH/NH4-
OH at 4:4:2:0.3). 1H NMR (400 MHz, CDCl3) δ 7.29 (s, 1H), 6.59
(s, 1H), 5.94 (s, 2H), 5.89 (bs, 2H), 4.25 (s, 2H), 4.11 (t, J ) 7.0
Hz, 2H), 2.73-2.60 (m, 1H), 2.55 (t, J ) 6.8 Hz, 1H), 1.93-1.86
(m, 2H), 1.03-1.02 (d, J ) 6.0 Hz, 6H); 13C NMR (100 MHz,
methanol-d4) δ 160.0, 158.4, 157.2, 152.4, 151.3, 149.4, 148.4,
133.1, 118.7, 110.6, 102.4, 88.5, 42.8, 40.1, 38.8, 27.6, 19.4; MS
m/z 513.2 (M + H)+. HPLC: (a) 98.5% (60% water/40%
acetonitrile); (b) 97.2% (from 20% to 50% acetonitrile).
2-Amino-8-(3,4-dimethoxy-benzyl)adenine. Starting from 3,4-
dimethoxyphenylacetic acid (3.0 g, 15.3 mmol) and 2,4,5,6-
tetraaminopyrimidine (4.1 g, 29 mmol) and following the procedure
for the synthesis of 16, the desired product was obtained (1.8 g,
39.2%). 1H NMR (400 MHz, DMSO-d6) δ 6.90 (s, 1H), 6.85 (d, J
) 8.0 Hz, 1H), 6.74 (d, J ) 8.0 Hz, 1H), 6.44 (bs, 2H), 5.51 (bs,
2H), 3.88 (s, 2H), 3.70 (s, 3H), 3.68 (s, 3H); MS m/z 301.2 (M +
H)+.
2-Fluoro-8-(6-chloro-benzo[1,3]dioxol-5-ylmethyl)adenine (20).
A solution of 17 (20 mg, 0.07 mmol) and NCS (35.6 mg, 0.27
mmol) in anhydrous DMF (0.4 mL) was stirred at room temperature
for 2.5 h. Following solvent removal, the product (11 mg, 48.8%)
was collected through silica gel column purification (CHCl3/EtOAc
2-Fluoro-8-(3,4-dimethoxy-benzyl)adenine (27). Starting from
2-amino-8-(3,4-dimethoxy-benzyl)adenine (0.66 g, 2.2 mmol) and
following the procedure for the synthesis of 17, the desired product
1
at 9:1 to 5:5). H NMR (400 MHz, DMSO-d6) δ 7.40 (bs, 2H),
6.97 (s, 1H), 6.89 (s, 2H), 5.97 (s, 2H), 4.04 (s, 2H); MS m/z 322.1
1
(M + H)+.
was obtained (0.34 g, 51%). H NMR (400 MHz, DMSO-d6) δ
7.61 (bs, 2H), 7.03 (s, 1H), 6.94 (d, J ) 8.3 Hz, 1H), 6.84 (d, J )
8.6 Hz, 1H), 4.07 (s, 2H), 3.80 (s, 3H), 3.77 (s, 3H); MS m/z 304.0
(M + H)+.
2-Fluoro-8-(6-iodo-benzo[1,3]dioxol-5-ylmethyl)-9-(pent-4-
ynyl)adenine (21). A solution of 18 (6 mg, 0.0145 mmol), Cs2-
CO3 (5 mg, 0.0145 mmol), and pent-4-ynyl tosylate (4.5 mg, 0.189
mmol) in anhydrous DMF (200 µL) was stirred at 60 °C for 1.5 h.
Following solvent removal, product (5.9 mg, 84.9%) was collected
through silica gel column purification (EtOAc/hexanes/CHCl3/i-
PrOH at 10:20:20:1). 1H NMR (400 MHz, CDCl3) δ 7.29 (s, 1H),
6.59 (s, 1H), 5.94 (s, 2H), 5.83 (bs, 2H), 4.26 (s, 2H), 4.11 (t, J )
7.4 Hz, 2H), 2.26-2.19 (m, 2H), 2.00 (t, J ) 2.5 Hz, 1H), 1.98-
1.94 (m, 2H); 13C NMR (100 MHz, CDCl3) δ 150.9, 148.9, 147.8,
131.5, 118.8, 109.4, 101.9, 88.1, 82.3, 69.9, 42.3, 39.2, 28.2, 15.9;
MS m/z 480.0 (M + H)+. HPLC: (a) 95.5% (60% water/40%
acetonitrile); (b) 95.0% (from 35% to 55% acetonitrile).
2-Fluoro-8-(6-bromo-benzo[1,3]dioxol-5-ylmethyl)-9-(pent-4-
ynyl)adenine (22). A solution of 19 (20 mg, 55 µmol), Cs2CO3
(18 mg, 55 µmol), and pent-4-ynyl tosylate (17 mg, 72 µmol) in
anhydrous DMF (138 µL) was stirred at 60 °C for 2 h. Following
solvent removal, the product (13 mg, 54.7%) was collected through
silica gel column purification (EtOAc/hexanes/CHCl3/i-PrOH at 10:
20:20:1). 1H NMR (400 MHz, CDCl3) δ 7.05 (s, 1H), 6.60 (s, 1H),
6.15 (bs, 2H), 5.96 (s, 2H), 4.28 (s, 2H), 4.13 (t, J ) 7.5 Hz, 2H),
2.25-2.21 (m, 2H), 2.00 (t, J ) 2.6 Hz, 1H), 1.98-1.92 (m, 2H);
13C NMR (100 MHz, CDCl3) δ 157.6, 156.0, 152.6, 150.2, 147.5,
127.6, 116.4, 114.1, 112.5, 109.5, 101.6, 81.9, 69.5, 41.9, 33.7,
27.8, 15.5; MS m/z 432.0 (M + H)+. HPLC: (a) 99.0% (60% water/
40% acetonitrile); (b) 98.5% (from 35% to 55% acetonitrile).
2-Fluoro-8-(6-chloro-benzo[1,3]dioxol-5-ylmethyl)-9-(pent-4-
ynyl)adenine (23). A solution of 20 (11 mg, 0.034 mmol), Cs2-
CO3 (11 mg, 0.034 mmol), and pent-4-ynyl tosylate (10.5 mg, 0.044
mmol) in anhydrous DMF (85 µL) was stirred at 50 °C for 1 h.
Following solvent removal, the product (4.2 mg, 31.9%) was
collected through silica gel column purification (EtOAc/hexanes/
CHCl3/i-PrOH at 10:20:20:1). 1H NMR (400 MHz, CDCl3) δ 6.89
(s, 1H), 6.61 (s, 1H), 5.98 (bs, 2H), 5.96 (s, 2H), 4.27 (s, 2H), 4.13
(t, J ) 7.5 Hz, 2H), 2.24-2.10 (m, 2H), 2.00-1.91 (m, 3H); 13C
NMR (100 MHz, CDCl3) δ 1597, 158.0, 156.3, 150.6, 147.7, 147.2,
126.2, 125.3, 110.0, 102.0, 82.3, 69.9, 42.2, 31.4, 28.1, 15.8; MS
m/z 388.1 (M + H)+. HPLC: (a) 98.1% (65% water/35%
acetonitrile); (b) 97.0% (from 35% to 45% acetonitrile).
2-Fluoro-8-(2-iodo-4,5-dimethoxy-benzyl)adenine (28). A so-
lution of 27 (50 mg, 0.165 mmol), NIS (74 mg, 0.33 mmol), and
TFA (18.8 mg, 12.7 µL, 0.165 mmol) in acetonitrile (120 µL) was
stirred at room temperature for 24 h. Following solvent removal,
the product (12 mg, 16.9%) was collected through silica gel column
purification (CHCl3/MeOH/AcOH at 80:1:0.5 to 30:1:0.5). MS m/z
430.1 (M + H)+.
2-Fluoro-8-(2-bromo-4,5-dimethoxy-benzyl)adenine (29). A
solution of 27 (65 mg, 0.226 mmol) and NBS (80 mg, 0.45 mmol)
in DMF (0.75 mL) was stirred at room temperature for 2.5 h.
Following solvent removal, the product (8.2 mg, 53.6%) was
collected through silica gel column purification (CHCl3/MeOH/
AcOH at 80:1:0.5 to 30:1:0.5). 1H NMR (400 MHz, acetone-d6) δ
7.13 (s, 1H), 7.09 (s, 1H), 6.80 (bs, 2H), 4.26 (s, 2H), 3.84 (s, 3H),
3.78 (s, 3H); MS m/z 382.0 (M + H)+.
2-Fluoro-8-(2-chloro-4,5-dimethoxy-benzyl)adenine (30). A
solution of 27 (40 mg, 0.132 mmol) and NCS (77.8 mg, 0.58 mmol)
in anhydrous DMF (0.7 mL) was stirred at room temperature for
5.5 h. Following solvent removal, the product (22 mg, 49.4%) was
collected through silica gel column purification (CHCl3/EtOAc at
8:2 to 4:6). MS m/z 338.0 (M + H)+.
2-Fluoro-8-(2-iodo-4,5-dimethoxy-benzyl)-9-(pent-4-ynyl)-
adenine (31). A solution of 2-fluoro-8-(2-iodo-4,5-dimethoxy-
benzyl)adenine (12 mg, 0.028 mmol), Cs2CO3 (9 mg, 0.028 mmol),
and pent-4-ynyl tosylate (8.6 mg, 7 µL, 0.036 mmol) in anhydrous
DMF (80 µL) was stirred at 50 °C for 1 h. Following solvent
removal, the product (13.7 mg, 99%) was collected through silica
gel column purification (CHCl3/EtOAc/hexanes/i-PrOH at
1
20:10:20:1). H NMR (400 MHz, CDCl3) δ 7.27 (s, 1H), 6.65 (s,
1H), 5.94 (bs, 2H), 4.29 (s, 2H), 4.13 (t, J ) 7.3 Hz, 2H), 3.87 (s,
3H), 3.73 (s, 3H), 2.26-2.22 (m, 2H), 2.00 (t, J ) 2.6 Hz, 1H),
1.97-1.90 (m, 2H); 13C NMR (100 MHz, CDCl3) δ 156.5, 153.2,
151.3, 150.0, 149.1, 130.9, 121.9, 112.6, 88.5, 82.5, 70.0, 56.4,
56.2, 42.6, 39.2, 28.4, 16.1; MS m/z 496.2 (M + H)+. HPLC: (a)
99.9% (60% water/40% acetonitrile); (b) 96.8% (from 35% to 55%
acetonitrile).