138 Bull. Chem. Soc. Jpn. Vol. 79, No. 1 (2006)
Table 2. Antimicrobial Activities of Calafianin Derivatives
Synthesis of Calafianin
Diameter of inhibition zoneaÞ/mm
Microorganism
1
13
Bacillus subtilis
Staphylococcus aureus
Micrococcus luteus
—
—
—
—
—
14.6
—
—
—
—
—
—
—
—
7.9
20.9
11.8
8.1
7.9
—
18.0
—
7.4
—
—
—
—
—
—
17.5
Esherichia coli
Pseudomonas aeruginosa
Xanthomonas campestris pv. oryzae
Bacteroides fragilis
Acholeplasma laidlawii
Pyricularia oryzae
Aspergillus niger
Mucor racemosus
Candida albicans
Saccharomyces cerevisiae
Mycobacterium smegmatis
methicillin-resistant Staphyloccocus aureus (MRSA)
a) —: No inhibition zone.
Synthesis of Calafianin (Revised Structure) (13). Method A:
Hydrolysis of 15 (98 mg, 0.33 mmol) in 1,4-dioxane (5 mL), H2O
(2 mL), and 1 M KOH (0.6 mL) was undertaken by essentially
the same procedure as in the case of 10 to give 16 (97 mg, quant.)
(Nissui Seiyaku Co.) for B. fragilis; Bacto PPLO agar (Difco) sup-
plemented with 15% horse serum, 0.1% glucose, 0.25% phenol red
(5 mg mLꢃ1), and 1.5% agar for A. laidlawii; Mueller-Hinton broth
(Difico) and 1.5% agar (Shimizu Shokuhin Co.) for MRSA; Taiyo
agar (Shimizu Syokuhin Kaisya Ltd.) for the other bacteria; a
medium composed of 1.0% yeast extract and 0.8% agar for fungi
and yeasts. A paper disk containing 10 mg of a sample was placed
on an agar plate. Bacteria, except for X. oryzae, were incubated at
37 ꢂC for 24 h. Yeasts and X. oryzae were incubated at 27 ꢂC for
24 h. Fungi were incubated at 27 ꢂC for 48 h. Antimicrobial activity
was expressed as diameter (mm) of the inhibitory zone.
1
as a colorless solid: H NMR (CD3OD) ꢁ 3.48 (1H, d, J ¼ 18:0
Hz), 3.66 (1H, d, J ¼ 18:0 Hz), 3.74 (1H, d, J ¼ 3:6 Hz), 3.93 (1H,
dd, J ¼ 2:4, 3.6 Hz), 7.22 (1H, d, J ¼ 2:4 Hz); 13C NMR (CD3OD)
ꢁ 46.0, 54.5, 57.4, 85.3, 124.4, 144.6, 157.1, 165.0, 187.1.
Condensation of 16 (97 mg, 0.33 mmol) with 1,4-diaminobutane
(16 mL, 0.17 mmol) as in the case of 1 afforded 13 (40 mg, 39%) as
a colorless solid: IR (KBr) 3410, 1701, 1670 cmꢃ1 1H NMR
;
(DMSO-d6) ꢁ 1.48 (4H, br), 3.20 (4H, br), 3.60 (2H, d, J ¼ 18:0
Hz), 3.67 (2H, d, J ¼ 18:0 Hz), 3.92 (2H, d, J ¼ 3:6 Hz), 4.12 (2H,
dd, J ¼ 2:4, 4.0 Hz), 7.48 (2H, d, J ¼ 2:4 Hz), 8.64 (2H, t, J ¼ 6:0
Hz); 13C NMR (DMSO-d6) ꢁ 26.3, 38.5, 43.3, 52.9, 56.8, 83.9,
122.7, 143.7, 154.8, 158.2, 185.9; HRMS m=z 650.9520, calcd
for C22H2079Br80BrN4O8Na: M þ Na, 650.9527.
This work was supported by Grant-in-Aid for the 21st Cen-
tury COE program ‘‘Keio Life Conjugate Chemistry,’’ as well
as Scientific Research C from the Ministry of Education, Cul-
ture, Sports, Science and Technology, Japan. The authors are
grateful to the COE program and JSPS Research Fellowships
for Young Scientests for financial support to TO.
Method B: To a solution of aerothionin (2) (55 mg, 0.068
mmol) in CH2Cl2 (1 mL) was added MsOH (0.5 mL) at 0 ꢂC. After
being stirred for 1 h, the reaction mixture was diluted with H2O
and extracted with CHCl3. The organic layer was washed with
brine, dried (Na2SO4), and evaporated. The residue was diluted
with CH2Cl2 (1 mL) and then DBU (0.1 mL) was added at room
temperature. After being stirred for 1 h, the mixture was diluted
with H2O and extracted with CHCl3. The organic layer was wash-
ed with brine, dried (Na2SO4), and evaporated. The residue was
purified by silica-gel column chromatography (toluene/acetone =
2/1) to give 13 (4 mg, 11%).
References
1
a) E. Fattorusso, L. Minale, G. Sodano, K. Moody, R. H.
Thomson, J. Chem. Soc., Chem. Commun. 1970, 752. b) J. A.
McMillan, I. C. Paul, Y. M. Goo, K. L. Rinehart, Jr., W. C.
Krueger, L. M. Pschigoda, Tetrahedron Lett. 1981, 22, 39. c) G.
Cimino, S. De Rosa, S. De Stefano, R. Self, G. Sodano, Tetra-
hedron Lett. 1983, 24, 3029.
2 D. J. Faulkner, Nat. Prod. Rep. 2002, 19, 1, many refer-
ences are cited therein.
Bioassay.14 Antimicrobial activity against 15 species of micro-
organisms was measured by the agar diffusion method using paper
disks (i.d. 6 mm, ADVANTEC). The microorganisms were as fol-
lows; Bacillus subtilis PCI 219, Staphylococcus aureus FDA 209P,
methicillin-resistant S. aureus K-24 (a clinica isolate, MRSA),
Micrococcus luteus PCI 1001, Mycobacterium smegmatis ATCC
607, Escherichia coli NIHJ, Pseudomonas aeruginosa P-3, Xan-
thomonas campestris pv. oryzae KB 88, Bacteroides fragilis
ATCC 23745, Acholeplasma laidlawii PG 8, Pyricularia oryzae
KF 180, Aspergillus niger ATCC 6275, Mucor racemosus IFO
4581, Candida albicans ATCC 64548, and Saccharomyces cerevi-
siae. Media for the microorganisms were as follows: GAM agar
3
a) S. Nishiyama, S. Yamamura, Tetrahedron Lett. 1983,
24, 3351. b) S. Nishiyama, S. Yamamura, Bull. Chem. Soc. Jpn.
1985, 58, 3453.
4
a) T. Ogamino, Y. Ishikawa, S. Nishiyama, Heterocycles
2003, 61, 73. b) T. Ogamino, S. Nishiyama, Tetrahedron 2003,
59, 9419.
5
Related synthetic studies: a) M. Murakata, K. Yamada,
O. Hoshino, J. Chem. Soc., Chem. Commun. 1994, 443. b) M.
Murakata, K. Yamada, O. Hoshino, Tetrahedron 1996, 52, 14713.
c) M. Murakata, M. Tamura, O. Hoshino, J. Org. Chem. 1997, 62,
4428. d) M. Murakata, K. Yamada, O. Hoshino, Heterocycles