7812 Journal of Medicinal Chemistry, 2006, Vol. 49, No. 26
Allan et al.
h. The reaction mixture was concentrated, and the residue was
purified by flash chromatography, eluting first with 1:1 ethyl acetate/
hexanes and then with 100% ethyl acetate to afford 312 mg (92%)
of the phosphonate ester as a white foam: IR (film, cm-1) 3169,
(m, 1H), 2.24-1.90 (m, 2H), 1.83-1.70 (m, 1H), 1.82 (s, 3H);
13C NMR (75 MHz, D2O, minor diastereomer) δ 166.9, 152.2,
138.3, 111.8, 92.2, 85.7, 84.3, 79.5, 62.1, 50.1, 36.4, 34.6 (d, J )
127 Hz), 11.9; ES MS m/z (M - H)- 361.4; MALDI FTMS m/z
(M + Na)+ calcd 385.0771, obsd 385.0773.
1
1710, 1694, 1682; H NMR (300 MHz, CDCl3) δ 8.89 (s, 1H),
6: mp >300 °C; 1H NMR (300 MHz, D2O, major diastereomer)
δ 7.56 (s, 1H), 5.87 (d, J ) 6.4 Hz, 1H), 4.45-4.34 (m, 1H), 4.07-
4.01 (m, 1H), 3.82-3.67 (m, 2H), 3.16-3.07 (m, 1H), 2.30-1.94
(m, 3H), 1.88-1.76 (m, 1H), 1.81 (s, 3H); 13C NMR (75 MHz,
D2O, major diastereomer) δ 166.8, 152.2, 138.1, 112.1, 90.4, 85.1,
83.4, 74.8, 62.0, 49.4, 36.3, 32.7 (d, J ) 133 Hz), 11.9; ES MS
m/z (M - H)- 361.4; MALDI FTMS m/z (M + Na)+ calcd
385.0771, obsd 385.0780.
7.34 (s, 1H), 6.92-6.73 (m, 1H), 5.85-5.73 (m, 2H), 4.55 (t, J )
7.3 Hz, 1H), 4.13-3.98 (m, 6H), 3.94-3.88 (m, 1H), 2.83-2.70
(m, 1H), 2.48-2.33 (m, 2H), 1.92 (s, 3H), 1.31 (t, J ) 7.1 Hz,
6H), 1.12-0.97 (m, 28H); 13C NMR (75 MHz, CDCl3) δ 163.7,
150.0, 149.9 (d, J ) 4.3 Hz), 134.9, 119.6 (d, J ) 186.5 Hz), 110.7,
88.2, 83.7, 69.5, 61.7 (dd, J ) 5.6, 2.9 Hz), 61.0, 47.4, 31.2 (d, J
) 23.2 Hz), 17.5, 17.4, 17.3, 17.2, 17.1, 17.0, 16.9, 16.44, 16.36,
13.4, 13.1, 12.8, 12.7, 12.6; ES MS m/z (M + H)+ 661.7; MALDI-
FTMS m/z (M + H)+ calcd 661.3100, obsd 661.3105. A 1.0 M
solution of tetrabutylammonium fluoride (1.40 mL, 1.40 mmol) was
added dropwise to a solution of the phosphonate ester (452 mg,
0.684 mmol) in 12 mL of dry THF, and the resulting solution was
stirred at room temperature under nitrogen for 25 min. The reaction
mixture was concentrated, and the resulting residue was purified
by flash chromatography, eluting first with 95:5 dichloromethane/
methanol and then with 9:1 dichloromethane/methanol to give 262
Synthesis of 19. To a solution of alcohol 18 (0.772 g, 1.59 mmol)
in CH2Cl2 (16 mL) was added DMAP (0.059 g, 0.48 mmol),
followed by 1,1′-thiocarbonyldiimidazole (0.369 g, 2.07 mmol) at
room temperature under nitrogen, and the reaction mixture was
stirred for 19 h. The solvent was removed in vacuo, and purification
by flash chromatography (elution with 40% ethyl acetate/hexanes)
gave 19 (0.943 g, 99%) as a white foam: mp 86-88 °C; IR (CCl4,
1
cm-1) 3179, 3127, 3060, 2956, 2933, 1696; H NMR (300 MHz,
mg (91%) of alcohol 15 as a sticky, white foam: IR (film, cm-1
)
CDCl3) δ 9.51 (s, 1H), 8.45 (s, 1H), 7.69 (bs, 1H), 7.47 (d, J )
1.2 Hz, 1H), 7.10 (bs, 1H), 6.21 (d, J ) 7.2 Hz, 1H), 5.79 (dd, J
) 5.3, 1.6 Hz, 1H), 4.45 (dd, J ) 7.1, 5.4 Hz, 1H), 4.40 (d, J )
1.6 Hz, 1H), 3.99 (q, J ) 9.7 Hz, 2H), 1.96 (d, J ) 1.0 Hz, 3H),
0.99 (s, 9H), 0.77 (s, 9H), 0.20 (s, 3H), 0.19 (s, 3H), -0.03 (s,
3H), -0.04 (s, 3H); 13C NMR (75 MHz, CDCl3) δ 183.3, 163.6,
150.6, 137.4, 134.4, 131.1, 117.6, 111.7, 86.9, 82.7, 81.1, 73.9,
63.2, 25.9, 25.2, 18.3, 17.6, 12.4, -5.2, -5.23, -5.39, -5.4; ES
1
3371, 3063, 1688; H NMR (300 MHz, methanol-d4) δ 7.77 (s,
1H), 6.78-6.58 (m, 1H), 6.06 (d, J ) 9.0 Hz, 1H), 5.79 (dd, J )
21.6, 17.2 Hz, 1H), 4.28 (d, J ) 4.9 Hz, 1H), 4.08-3.96 (m, 5H),
3.76-3.73 (m, 2H), 2.70-2.58 (m, 1H), 2.53-2.30 (m, 2H), 1.88
(s, 3H), 1.29 (t, J ) 7.0 Hz, 6H); 13C NMR (75 MHz, CDCl3) δ
166.2, 152.8, 152.6 (d, J ) 4.4 Hz), 138.0, 119.1 (d, J ) 186.8
Hz), 112.2, 89.3, 89.0, 74.0, 63.5, 63.4 (d, J ) 5.8 Hz), 30.7, 30.4,
16.7 (d, J ) 6.1 Hz), 12.5; ES MS m/z (M + Na)+ 441.3; MALDI-
FTMS m/z (M + H)+ calcd 419.1578, obsd 419.1582.
MS m/z (M + H)+ 597.9. Anal. (C26H44N4O6SSi ) C, H, N.
2
Synthesis of Pyrimidine-2,4-dione 20. A solution of 19 (0.911
g, 1.53 mmol) and AIBN (0.126 g, 0.765 mmol) in 26 mL of
CH2Cl2/benzene (2:3) was degassed with nitrogen for 5 min.
Allyltributyltin (2.37 mL, 0.765 mmol) was added, and the solution
was irradiated for 3 h with a high-pressure 450 W Hanovia mercury
lamp. The solvent was removed in vacuo, and purification by flash
chromatography (elution with a gradient of 10-30% ethyl acetate
in hexanes) afforded 20 (0.309 g, 40%), a white foam, as the major
product: IR (CCl4, cm-1) 2953, 2935, 2862, 1682; 1H NMR (300
MHz, CDCl3) δ 8.43 (bs, 1H), 7.71 (d, J ) 1.2 Hz, 1H), 5.69-
5.83 (m, 1H), 5.66 (d, J ) 1.6 Hz, 1H), 5.03-5.11 (m, 2H), 4.29
(d, J ) 4.3 Hz, 1H), 4.11 (d, J ) 11.9 Hz, 1H), 4.04 (d, J ) 8.9
Hz, 1H), 3.72 (dd, J ) 12, 2.5 Hz, 1H), 2.34-2.43 (m, 1H), 1.99-
2.18 (m, 2H), 1.92 (d, J ) 1.2 Hz, 3H), 0.95 (s, 9H), 0.90 (s, 9H),
0.21 (s, 3H), 0.14 (s, 3H), 0.12 (s, 3H), 0.10 (s, 3H); 13C NMR (75
MHz, CDCl3) δ 164.0, 150.3, 135.7, 116.6, 109.6, 90.9, 84.6, 62.4,
40.8, 28.8, 26.0, 25.8, 18.6, 18.1, 12.7, -4.2, -5.2, -5.3, -5.5;
ESI MS m/z (M + Na)+ 533.8. Anal. (C25H46N2O5Si2) C, H, N.
Synthesis of Aldehyde 21. To a solution of 20 in 24 mL of
acetone/H2O (4:1) was added NMO (0.30 g, 2.58 mmol) and OsO4
(0.030 mg, 0.118 mmol) at room temperature, and the reaction
mixture was stirred for 3 h. Freshly prepared saturated aqueous
Na2S2O3 (4.6 mL) was added to the reaction mixture followed by
water (4.6 mL). The solution was extracted three times with ethyl
acetate, and the combined organic layers were washed with saturated
NaHCO3 and brine and dried over MgSO4. Purification by flash
chromatography (elution with a gradient of 50-100% ethyl acetate
in hexanes) gave a 1:1 mixture of diastereomeric diols (0.818 g,
67%) as a white foam: IR (CCl4, cm-1) 3429, 3185, 3063, 2958,
Synthesis of Phosphonic Acid Diethyl Ester 16. Sodium
methoxide (14 mg, 0.26 mmol) was added to a solution of alcohol
15 (88 mg, 0.21 mmol) in 3 mL of dry methanol, and the reaction
mixture was stirred at room temperature under nitrogen for 42 h.
Then 1 N HCl (0.6 mL) was added to achieve a pH of 2, and the
reaction mixture was concentrated. The residue was taken up in
acetone and filtered to remove the sodium salts, and the filtrate
was concentrated to give a colorless oil. The resulting residue was
purified by flash chromatography, eluting with 95:5 dichloro-
methane/methanol to afford 70 mg (80%) of mixture 16 as a sticky
white foam: IR (film, cm-1) 3421, 3062, 1690; 1H NMR (300 MHz,
CDCl3) δ 7.46 (d, J ) 1.2 Hz, 0.3H), 7.41 (d, J ) 1.2 Hz, 0.7H),
5.84 (d, J ) 6.5 Hz, 0.3H), 5.80 (d, J ) 6.5 Hz, 0.7H), 4.77 (dd,
J ) 7.5, 3.3 Hz, 0.7H), 4.55 (dd, J ) 6.9, 2.0 Hz, 0.3H), 4.49-
4.23 (m, 2H), 4.19-4.06 (m, 4H), 3.97-3.87 (m, 1H), 3.84-3.76
(m, 1H), 3.13-2.98 (m, 1H), 2.45-1.95 (m, 3H), 1.92 (s, 3H),
1.90-1.79 (m, 1H), 1.33 (t, J ) 7.1 Hz, 6H); 13C NMR (75 MHz,
CDCl3, major diastereomer) δ 163.6, 150.49, 136.5, 111.3, 91.5,
85.5, 83.4, 73.7, 62.8, 61.93 (dd, J ) 9.6, 6.2 Hz), 50.1, 34.6 (d,
J ) 284 Hz), 30.9, 16.4 (dd, J ) 5.9, 1.1 Hz), 12.53; 13C NMR
(75 MHz, CDCl3, minor diastereomer) δ 163.7, 150.53, 137.2,
111.1, 94.1, 85.4, 85.2, 73.7, 63.1, 61.89 (d, J ) 9.7, 6.6 Hz), 49.9,
34.7 (d, J ) 259 Hz), 31.1, 16.4 (dd, J ) 5.9, 1.1 Hz), 12.50; ES
MS m/z (M + Na)+ 441.4; MALDI-FTMS m/z (M + H)+ calcd
419.1578, obsd 419.1591.
Synthesis of Phosphonic Acids 5 and 6. Trimethylsilyl bromide
(1.55 mL, 11.7 mmol) was added dropwise to a stirred solution of
16 (249 mg, 0.594 mmol) in 7.5 mL of dry DMF under nitrogen at
-78 °C. The reaction mixture was allowed to warm to room
temperature and was stirred for 23 h. The solvent was removed in
vacuo, and the resulting residue was purified by ion-exchange
chromatography (Sephadex-CM, C25 resin), followed by lyo-
philization, providing 246 mg of 5 and 6 as a white solid and a
mixture of diastereomers in a 3:1 ratio (as determined by HPLC).
The diastereomers were separated by preparative HPLC. Fractions
containing the purified diastereomers were pooled, concentrated
in vacuo, triturated with ether, and dried under high vacuum.
5: mp >300 °C; 1H NMR (300 MHz, D2O, minor diastereomer)
δ 7.58 (s, 1H), 5.91 (d, J ) 5.5 Hz, 1H), 4.53-4.45 (m, 1H), 4.28-
4.17 (m, 2H), 3.79-3.63 (m, 2H), 3.18-3.08 (m, 1H), 2.50-2.38
1
2929, 2865, 1708; H NMR (300 MHz, CDCl3) δ 8.88 (bs, 1H),
8.66 (bs, 1H), 7.71 (d, J ) 1.2 Hz, 1H), 7.61 (d, J ) 1.2 Hz), 5.68
(d, J ) 1.6 Hz, 1H), 5.64 (s, 1H), 4.42 (d, J ) 4.0 Hz, 1H), 4.38
(d, J ) 4.8 Hz, 1H), 4.03-4.14 (m, 4H), 3.60-3.75 (m, 6H), 3.36-
3.49 (m, 2H), 3.01 (bs, 1H), 2.70 (bs, 1H), 2.30-2.40 (m, 1H),
2.18-2.28 (m, 3H), 1.91 (d, J ) 1.1 Hz, 3H), 1.88 (d, J ) 1.1 Hz,
3H), 1.30-1.39 (m, 4H), 0.95 (s, 9H), 0.94 (s, 9H), 0.91 (s, 9H),
0.90 (s, 9H), 0.24 (s, 3H), 0.19 (s, 3H), 0.14 (s, 3H), 0.138 (s, 3H),
0.13 (s, 3H), 0.12 (s, 3H), 0.11 (s, 6H); 13C NMR (75 MHz, CDCl3,
isomer A) δ 163.8, 150.3, 135.7, 109.7, 90.9, 84.7, 78.0, 70.8, 66.9,
62.3, 38.5, 27.8, 26.0, 25.8, 18.6, 18.1, 12.6, -5.1, -5.2, -5.3,
-5.4; 13C NMR (75 MHz, CDCl3, isomer B) δ 164.0, 150.4, 136.0,