[13] Sadek B, Łażewska D, Hagenow S, Kieć-Kononowicz K, Stark H
For docking purposes, Schrödinger
Suite (v.
MAaesCtrCo EPTED MANUSCRIPT
(2016) Histamine H3R Antagonists: From Scaffold Hopping to Clinical
Candidates. In: Blandina P., Passani M. (eds) Histamine Receptors. The
Receptors, Vol. 28. Humana Press, Cham. DOI 10.1007/978-3-319-
40308-3_5.
11.1.012) was used [52]. Ligands were built in their ionized
forms (protonated N4 piperazine nitrogen, structure charge +1)
and their bioactive conformations were generated using ConfGen
module [40,41] (water environment, target number of conformers
– 20). Binding site was centered on ligand placed in homology
model (Pitolisant). Docking to rigid form of receptor was
performed using Glide module [53-57] (precision standard,
flexible ligand sampling, max 5 poses per conformer). Ligands
were rated according their position in binding pocket,
interactions with binding pocket amino acids as well as the
docking score value. Ligand interaction diagrams were generated
using Schrödinger Maestro, ligand-receptor visualizations were
generated using UCSF Chimera [58].
[14] Sander K, von Coburg Y, Camelin JC, Ligneau X, Rau O, Schubert-
Zsilavecz M, Schwartz JC, Stark H. Acidic elements in histamine H3
receptor antagonists. Bioorg Med Chem Lett. 2010; 20: 1581-1584.
[15] Wingen K, Stark H. Scaffold variations in amine warhead of histamine
H3 receptor antagonists. Drug Discovery Today Technol. 2013; 4: 483-
489.
[16] Cowart M, Hsieh G, Black LA, Zhan C, Gomez EJ, Pai M, Strakhova
M, Manelli A, Carr T, Wetter J, Lee A, Diaz G, Garrison T, Brioni JD.
Pharmacological characterization of A-960656, a histamine H3 receptor
antagonist with efficacy in animal models of osteoarthritis and
neuropathic pain. Eur J Pharmacol. 2012; 684: 87-94.
[17] Bakker RA. Histamine H3-receptor isoforms. Inflamm Res. 2004; 53:
509-516.
5. Acknowledgements
[18] Łażewska D: The search for non-imidazole histamine H3 receptor
ligands. PhD Thesis, Jagiellonian University Medical College, Kraków,
2004.
[19] Łażewska D, Ligneau X, Schwartz JC, Schunack W, Stark H, Kieć-
Kononowicz K. Ether derivatives of 3-piperidinopropan-1-ol as non-
imidazole histamine H3 receptor antagonists. Bioorg Med Chem. 2006;
We thank K. Grau and J. S. Schwed for excellent technical
assistance. We are pleased to acknowledge the generous support
of National Science Center, Poland granted on the basis of
decision
No.
2016/23/B/NZ7/01063,
K/DSC/004310,
K/ZDS/007131 and K/ZDS/007121. Also, support provided to
BS from intermural research grants sponsored by the Research
Office of United Arab Emirates University is acknowledged.
Support by DFG INST 208/664-1 (HS) and COST CA15135
(HS, KK) is also acknowledged.
14: 3522-3529.
[20] Alter A. Disubstituted piperazines useful as schistosomiasis agents.
US3270004; 1966.
[21] Kuder K, Łażewska D, Latacz G, Schwed JS, Karcz T, Stark H,
Karolak-Wojciechowska J, Kieć-Kononowicz K. Chlorphenoxy
aminoalkyl derivatives as histamine H3R ligands and antiseizure agents.
Bioorg Med Chem. 2016; 24: 53–72.
6. Supplementary data
[22] Kottke T, Sander K, Weizel L, Schneider EH, Seifert S, Stark H.
Receptor-specific functional efficacies of alkyl imidazoles as dual
histamine H3/H4 receptor ligands. Eur J Pharmacol. 2011; 654: 200–
208.
[23] Lipp R, Stark H, Schunack W. Receptor biochemistry and methodology.
In: Schwartz J-C, Haas HL, eds. The Third Histamine Receptor. New
York: Wiley Liss; 1992: 57–72.
[24] Ganellin CR, Leurquin F, Piripitsi A, Arrang JM, Garbarg M, Ligneau
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histamine H3-receptor antagonists. Arch Pharm. 1998; 331: 395–404.
[25] Cruciani G, Carosati E, De Boeck E, Ethirajulu K, Mackie C, Howe T,
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with doxepin. Nature. 2011; 475: 65–70.
Supplementary data associated with this article can be found,
in the online version, at
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