Molecules 2016, 21, 1043
6 of 8
27.59, 32.18, 38.72, 42.35, 43.56, 60.75, 61.50, 80.28, 125.32, 127.31, 127.63, 128,72, 129.26, 129.42, 129.51,
129.82, 130.39, 130.53, 130.91, 131.57, 133.27, 136.25, 136.91, 137.43, 138.45, 139.02, 170.27, 176.31. Mass
spectral analysis for C42H46N4O2-H+, NaCl (cal. 697.33 found 697.30).
Blocked-Axle 7: Blocked-trityl-axle
6 (600 mg, 0.94 mmol) was exposed to 200 µL of 1N HCl
in 10 mL of methanol. The reaction mixture was stirred at room temperature for 4 hours. Sodium
bicarbonate was added to neutralize the solution. Solid Na2CO3 was removed via filtration, and the
methanol was evaporated under vacuum. The crude product was washed with ether (3
the trityl by-products. Blocked-axle was obtained as a yellow solid in 95% yield (350 mg, 0.89 mmol).
1H-NMR:
1.68 (2H, m), 2.20 (6H, s), 2.30 (2H, m), 3.15 (2H, m), 3.32 (2H, m), 3.40 (2H, t), 4.22–4.29
(4H, m), 7.14 (1H, s), 7.18–7.23 (4H, m), 7.49 (2H, s). 13C-NMR:
21.24, 27.53, 32.16, 38.70, 42.31, 43.59,
ˆ) to remove
7
δ
δ
60.73, 61.55, 125.35, 127.33, 129.47, 129.80, 130.87, 131.61, 133.31, 136.22, 136.94, 137.40, 138.41, 138.96,
170.22, 176.27. Mass spectral analysis for C23H32N4O2-H+, MeOH (cal. 429.29 found 429.22).
FMOC-R1: Blocked-axle
7 (600 mg, 1.5 mmol) was suspended in a diethyl ether/ethyl acetate
(50/50 (v/v)) solution. Sodium hexafluorophosphate (300 mg 1.8 mmol) was added, and the mixture
was extracted with pH = 3 water. Organic solvents were evaporated under vacuum, and the residue
was dissolved in 0.5 mL of freshly distilled chloroform. The wheel (400 mg, 0.6 mmol) was added,
and the solution was stirred under Ar. After 30 min, FMOC-Cl (390 mg, 1.5mmol) was added to the
solution. The reaction mixture was stirred at room temperature for 12 h. Excess Na2CO3 was added to
the reaction mixture, which was stirred for an additional 12 h. The solution was filtered to remove
Na2CO3, and CHCl3 was evaporated under vacuum. The crude material was purified via column
chromatography (100% CH2Cl2, then 3% to 5% methanol). FMOC-R
1
was isolated as a red foam in a
1
52% yield (400 mg, 0.3 mmol). H-NMR (CDCl3):
δ
1.50 (18H, s), 2.07 (2H, t), 2.27–2.31 (8H, m), 3.41
21.19, 28.38, 31.46, 35.42, 36.60, 40.81, 41.11,
(2H, t), 3.50–4.38 (35H, m), 6.78–7.80 (21H, m). 13C-NMR:
δ
46.57, 46.92, 52.17, 53.59, 66.74, 67.03, 67.36, 68.05, 69.60, 70.79, 77.36, 80.50, 106.66, 113.11, 113.59, 120.33,
124.91, 127.24, 127.39, 127.76, 128.42, 133.05, 133.93, 134.00, 134.59, 135.02, 138.10, 158.12, 162.74, 168.88,
169.12. Mass spectral analysis for C72H92N6O16-H+, HCl, HCO2H, NaPF6 (cal 1547.60 found 1547.64).
Trityl-R2: The same procedure was followed for FMOC-R
1
synthesis with Trityl-Cl replacing
1
FMOC-Cl. Trityl-R
2
was isolated as a yellow oil in a 51% yield (400 mg, 0.3 mmol). H-NMR (CDCl3):
δ
1.50 (18H, s), 2.27 (2H, t), 2.32 (6H, s), 2.38 (2H, m), 3.41 (2H, m), 3.54 (2H, m), 3.65–4.48 (28H, m), 6.82
(6H, m), 6.96–7.8 (14H, m). 13C-NMR:
δ
21.16, 28.12, 28.37, 30.93, 33.89, 40.97, 43.41, 47.57, 52.51, 69.03,
69.54, 70.34, 77.31, 80.37, 106.05, 111.88, 115.76, 124.81, 126.42, 127.29, 127.83, 127.91, 128.06, 128.11,
128.19 128.60, 133.10, 134.13, 138.20, 145.96, 149.19, 153.10, 158.15, 168.60. Mass spectral analysis for
C76H96N6O14-H+, MeOH, H2O, NaCl (cal 1425.74 found 1425.71).
3.3. Measuring the Association Constants
Complex formation between pseudorotaxane
solutions (CDCl3, DMSO-d6, and 70/30 (v/v) DMSO-d6 to D2O) at 25.0 C. For the assay performed in
8
and the wheel ˝were investigated in various
CDCl3, a constant concentration of pseudorotaxane
8 (10 mM) in 0.5 mL CDCl3 was exposed to an
increasing amount of wheel. The wheel was added to the NMR tube via small volume additions from
a stock solution of wheel in CDCl3 (0.15 M). The change in volume of 11% after the final addition of
wheel was not considered in the determination of the association constant. A similar procedure was
followed for the assays performed in the DMSO-d6, except that the concentration of the wheel-stock
solution was higher (25 mM). For the assay performed in 70/30 (v/v) DMSO-d6 to D2O, the wheel
and pseudorotaxane
concentration, precipitation was observed. To obtain association constants, shifts in the chemical shift
of an amide proton of pseudorotaxane , caused by changes in a wheel’s concentration, were plotted
and fitted, using non-linear least-square fitting procedure to derive the association constants [31].
The following binding equation was used to calculate the association constants, ∆δ
8 were mixed to give a final 50 mM solutions of both components. At a higher
8
=
∆δobs ´ ∆δ0
= KA[T] ∆δmax / (1 + KA[T]), where the difference in the chemical shift (∆δ) of an axle proton in the
presence of wheel (∆δobs) and in its absence (∆δ0) depends on the concentration of the wheel (T),