The Journal of Organic Chemistry
Note
6H), 2.30 (s, 6H); 13C{1H} NMR (93 MHz, CDCl3) δ 158.3, 156.5,
141.7, 134.1, 133.0, 129.8, 122.1, 121.7, 114.1, 60.7, 15.4, 14.7;
HRMS (ESI/QTOF) m/z [M + H]+ calcd for C20H21BF2N2O
355.1793, found 355.1787.
2-OCou, while only a decrease in fluorescence (photo-
bleaching) was measured in a control experiment irradiating
cells incubated only with 7-hydroxycoumarin. These studies
indicate that the use of ethers as a linkage to directly
photorelease alcohols is a viable strategy in biological systems.
In conclusion, the synthesis of meso-substituted BODIPY
ethers was demonstrated, and direct photorelease of the
corresponding alcohols has been reported. Swapping the
fluorines on the boron for methyls effectively increases the
quantum yield of release, while iodination does not. The
Williamson ether synthesis between 2-Br and an alcohol of
interest may be a good path for making these ethers, but more
work needs to be done to find a better path for the synthesis of
2-Br itself. Practical use was demonstrated by direct photo-
release of the fluorescent dye 7-hydroxycoumarin in living
HeLa cells.
8-Benzoxymethyl-1,3,5,7-tetramethyl Pyrromethene Fluorobo-
rate (1-OBn). The compound was obtained from 2,4-dimethyl pyrrole
(400 μL, 3.9 mmol, 2 equiv) and benzyloxyacetyl chloride (310 μL,
1.95 mmol, 1 equiv) as a bright orange solid in 64% yield (447 mg):
1H NMR (400 MHz, CDCl3) δ 7.31−7.37 (m, 5 H), 6.04 (s, 2 H),
4.65 (s, 2 H), 4.61 (s, 2 H), 2.52 (s, 6 H), 2.31 (s, 6 H); 13C{1H}
NMR (93 MHz, CDCl3) δ 155.9, 141.9, 137.1, 136.2, 133.1, 128.6,
128.4, 128.3, 122.0, 73.1, 63.1, 15.4; HRMS (ESI/QTOF) m/z [M +
H]+ calcd for C21H23BF2N2O 369.1944, found 369.1952.
General Procedure for Methylation of BODIPY Etherate
Photocages. To a solution of 1-OBn or 1-OPh in 5 mL of dry
dichloromethane was added 11 equiv of methylmagnesium bromide.
The solutions were stirred for 1 h, quenched with ammonium
chloride, washed 3 times with water and once with brine, and dried
over sodium sulfate. The solvent was removed under a vacuum, and
the mixtures were purified as listed below.
EXPERIMENTAL SECTION
■
1,3,5,7-Tetramethyl-8-phenoxymethyl Pyrromethene Methylbo-
rate (2-OPh). The compound was obtained from 1-OPh (100 mg,
0.28 mmol, 1 equiv) and methylmagnesium bromide (1 mL 3 M
solution in THF, 3.0 mmol, 11 equiv). The crude solid was purified
with silica gel column chromatography using 90:10 hexanes/
methylene chloride as the eluent to give the product as a bright
General Information. Unless otherwise stated, all purchased
chemicals were used without further purification. Solvents were dried
for 3 days over activated 4 Å molecular sieves. Compound 1-OAc was
prepared as previously reported.21 All reactions were done in the dark.
Light Sources. Irradiation with white light was carried out using a
Utilitech brand 500 W model no. MPL1025-C500 K9030 halogen
work lamp. A 500 mL beaker filled with water was placed in front of
the lamp, and a fan was blown on the lamp and the sample to prevent
overheating. Samples were irradiated in NMR tubes approximately 25
cm away from the light source.
1
orange solid in 80% yield (75 mg): H NMR (400 MHz, CDCl3) δ
7.36 (t, J = 8 Hz, 2H), 7.05 (t, J = 8 Hz, 2H), 7.00 (d, J = 8 Hz, 2H),
5.20 (s, 2H), 2.56 (s, 6H), 2.35 (s, 6H), 0.22 (s, 6H); 13C{1H} NMR
(93 MHz, CDCl3) δ 158.5, 153.1, 137.4, 134.2, 131.6, 129.8, 122.6,
121.5, 114.2, 61.3, 16.7, 15.8, 1.2; HRMS (ESI/QTOF) m/z [M +
H]+ calcd for C22H27BN2O 346.2295, found 347.2288.
Irradiation with a green LED was carried out using an Luzchem
EXPO-LED photoreactor equipped with 5 LED-GR (4 W) lamps.
The photoreactor was placed on its side, and samples were irradiated
in NMR tubes approximately 10 cm away from the light source.
Irradiation with a green laser was carried out using a Nd:YAG laser
equipped with a 532 nm crystal. Samples were irradiated in quartz
cuvettes equipped with stir bars.
8-Benzoxymethyl-1,3,5,7-tetramethyl Pyrromethene Methylbo-
rate (2-OBn). The compound was obtained from 1-OBn (100 mg,
0.27 mmol, 1 equiv) and methylmagnesium bromide (1 mL 3 M
solution in THF, 3.0 mmol, 11 equiv). The crude solid was purified
with silica gel column chromatography using 90:10 hexanes/
methylene chloride as the eluent to give the product as a bright
Procedure for Determination of Quantum Yields. BODIPY
compounds (2−20 mg) were dissolved in 5 mL of deuterated
chloroform. The solutions were spiked with a known amount of
dimethylsulfone as an internal standard and diluted to 10 mL with
deuterated methanol. The solutions were checked to ensure that they
had an absorbance of greater than 2 at 532 nm. Three mL of the
solutions were transferred to quartz cuvettes and irradiated with a
ND:YAG 532 nm laser under air. At varying time intervals of
irradiation, 0.6 mL of the samples were transferred to NMR tubes,
and 1H NMR spectra were obtained. The solutions were then
returned to the cuvettes for further irradiation. Photorelease was
monitored at six time points for each compound by 1H NMR,
following the growth of the leaving group. The concentration of the
released compound was calculated using the internal standard, and the
quantum yield was calculated using 1-OAc (8-acetoxymethyl-1,3,5,7-
tetramethyl pyrromethene fluoroborate) as the actinometer. 1-OAc
was irradiated in the same manner as the other photocages.
General Procedure for the Synthesis of 1-OBn and 1-OPh. To a
solution of 2,4-dimethylpyrrole (2 equiv) stirring in 3 mL of dry
dichloromethane in a two-neck flask equipped with a condenser under
argon was added 1 equiv of acid chloride. The mixture was stirred at
reflux in an oil bath for 2 h and turned dark red. The mixture was
cooled to room temperature, and triethylamine was added followed by
boron trifluoride diethyl etherate. The solvent was reduced under a
vacuum to give a dark oily liquid. Methanol was added to precipitate
the product, which was then filtered and washed with methanol until
the solid was bright orange.
1
orange solid in 60% yield (60 mg): H NMR (400 MHz, CDCl3) δ
7.40 (m, 5H), 6.09 (s, 2H), 4.77 (s, 2H), 4.65 (s, 2H), 2.49 (s 6H),
2.40 (s, 6H), 0.24 (s, 6H); 13C{1H} NMR (93 MHz, CDCl3) δ 152.5,
137.4, 137.3, 136.1, 131.7, 128.6, 128.5, 128.2, 122.4, 73.4, 63.9, 16.7,
15.7; HRMS (ESI/QTOF) m/z [M + H]+ calcd for C23H29BN2O
361.2446, found 361.2454.
General Iodination Procedure. To a solution of 2-OBn or 2-OPh
dissolved in 10 mL of dry THF was added 3 equiv of N-
iodosuccinimide. The solution was stirred until the color changed
to dark pink, after which dichloromethane and water were added. The
organic layer was washed with water three times and dried over
sodium sulfate. The solvent was removed under a vacuum, and the
crude product was purified as listed below.
8-Benzoxymethyl-2,6-diiodo-1,3,5,7-tetramethyl pyrromethene
methylborate (3-OBn). The compound was obtained from 2-OBn
(50 mg, 0.14 mmol, 1 equiv) and N-iodosuccinimide (95 mg, 0.42
mmol, 3 equiv). The crude product was purified with silica gel column
chromatography using hexanes to a 90:10 hexanes/dichloromethane
gradient as the eluent to give the product as a red solid in 70% yield
(59 mg): 1H NMR (400 MHz, CDCl3) δ 7.35 (m, 5 H), 4.73 (s, 2H),
4.63 (s, 2H), 2.52 (s, 6H), 2.42 (s, 6H), 0.17 (s, 6H); 13C{1H} NMR
(93 MHz, CDCl3) δ 153.2, 139.9, 136.8, 135.2, 131.6, 128.7, 128.7,
128.5, 87.1, 73.7, 64.5, 18.5, 18.0, 1.2; HRMS (ESI/QTOF) m/z [M
− H]− calcd for C22H25BI2N2O 597.0077, found 597.0059.
2,6-Diiodo-1,3,5,7-tetramethyl-8-Phenoxymethyl pyrromethene
methylborate (3-OPh). The compound was obtained from 2-OPh
(50 mg, 0.14 mmol, 1 equiv) and N-iodosuccinimide (95 mg, 0.42
mmol, 3 equiv). The crude product was purified with silica gel column
chromatography using hexanes to a 90:10 hexanes/dichloromethane
gradient as the eluent to give the product as a red solid in 72% yield
(62 mg): 1H NMR (400 MHz, CDCl3) δ 7.36 (dd, J = 8, 7.6 Hz, 2H),
7.06 (t, J = 7.6 Hz, 1H), 7.00 (d, J = 8 Hz, 2H), 5.20 (s, 2H), 2.56 (s,
8-Phenoxymethyl-1,3,5,7-tetramethyl Pyrromethene Fluorobo-
rate (1-OPh). The compound was obtained from 2,4-dimethyl pyrrole
(400 μL, 3.9 mmol, 2 equiv) and phenoxyacetyl chloride (270 μL,
1.95 mmol, 1 equiv) as a bright orange solid in 73% yield (511 mg):
1H NMR (400 MHz, CDCl3) δ 7.34 (t, J = 6 Hz, 2H), 7.04 (t, J = 6
Hz, 1H), 6.98 (d, J = 6 Hz, 2H), 6.07 (s, 2H), 5.15 (s, 2H), 2.54 (s,
D
J. Org. Chem. XXXX, XXX, XXX−XXX