Bioorganic & Medicinal Chemistry Letters
An evaluation of Minor Groove Binders as anti-lung cancer
therapeutics
b
a
c
b
Fraser J. Scott a, , Mireia Puig-Sellart , Abedawn I. Khalaf , Catherine J. Henderson , Gareth Westrop ,
⇑
David G. Watson b, Katharine Carter b, M. Helen Grant c, Colin J. Suckling a
a WestCHEM, Department of Pure and Applied Chemistry, University of Strathclyde, 295 Cathedral Street, Glasgow G1 1XL, United Kingdom
b Strathclyde Institute of Pharmacy and Biomedical Sciences, University of Strathclyde, 161 Cathedral Street, Glasgow G4 0RE, United Kingdom
c Department of Biomedical Engineering, University of Strathclyde, Wolfson Centre, Glasgow G1 0NW, United Kingdom
a r t i c l e i n f o
a b s t r a c t
Article history:
A series of 47 structurally diverse MGBs, derived from the natural product distamycin, was evaluated for
anti-lung cancer activity by screening against the melanoma cancer cell line B16-F10. Five compounds
have been found to possess significant activity, more so than a standard therapy, Gemcitabine.
Moreover, one compound has been found to have an activity around 70-fold that of Gemcitabine and
has a favourable selectivity index of greater than 125. Furthermore, initial studies have revealed this
compound to be metabolically stable and thus it represents a lead for further optimisation towards a
novel treatment for lung cancer.
Received 28 May 2016
Revised 14 June 2016
Accepted 15 June 2016
Available online 16 June 2016
Keywords:
Minor Groove Binders
Anti-cancer
Ó 2016 Elsevier Ltd. All rights reserved.
Lung cancer
Cancer is a major health problem responsible for approximately
13% of the deaths worldwide. The incidence is estimated to be
around 13 million cases a year, according to WHO.1 In particular,
lung cancer is one of the most frequent cancers causing around
1.4 million deaths per annum. The treatment of lung cancer is
based on chemotherapy and/or surgery. However, surgery is
limited to those tumours with peripheral location. Other types of
tumours with a more difficult access, such as small-cell lung
cancer, are generally treated with chemotherapeutic agents. A
first-line chemotherapy treatment is a platinum based combina-
tion of cisplatin or carboplatin with etoposide or irinotecan.2 The
mechanism of action of platinum based compounds is localised
at the major groove of the DNA where the drug interferes with
the genetic transcription. These modifications result in variations
in the product from crucial genes involved in cell-cycle replications
and finally induce cell apoptosis. Nonetheless, treatment with
many traditional anticancer drugs, such as cisplatin, is related to
drug resistances and unsuccessful therapeutic outcome. Therefore,
the need of new anticancer compounds that could overcome those
resistances by binding to the smaller groove of the DNA.3
Our approach at the University of Strathclyde has been to
diversify the structure of the first discovered MGB, distamycin,
and to generate a portfolio of significantly active Strathclyde Minor
Groove Binders (S-MGBs). We can now design novel S-MGBs with
tailored activities through
a detailed understanding of DNA
binding, sequence selectivity, and physicochemical characteristics
(Fig. 1).
Deviations from the distamycin structure have included tuning
the basicity (pKa) of the tail group amidine at the C-terminus, the
addition of larger alkyl side chains and the introduction of thiazole
rings. Aromatic rings replaced the distamycin formyl group and,
importantly, the N-terminal amide was replaced by its isosteric
alkene.5 These structural changes systematically modified the
physicochemical properties to increase hydrophobic contacts with
the target DNA resulting in a library of highly potent compounds
displaying distinct biological activities. The physicochemical
aspects of this design hypothesis were investigated in detail and
shown to lead to strong DNA binding driven largely by enthalpic
interactions.6 Furthermore, studies suggest that the physicochemi-
cal properties of MGBs substantially determine their net uptake into
target cells. Our knowledge in this area has led to the discovery of a
family of compounds with significant anti-Gram-positive bacterial
activity, the most active of which, MGB-BP-3, has successfully
completed Phase I clinical trials for the treatment of Clostridium
difficile infections. Furthermore, other S-MGBs have been shown to
be active against Trypanosoma both in cell-based studies and in
mouse models of disease and leishmaniasis.7
Minor Groove Binders (MGBs) are a class of compound that
specifically, and reversibly, bind to the minor groove of DNA. They
recognise specific base sequences of DNA with high selectivity and
achieve efficacy by interfering with transcription factors and
altering gene expression.4
⇑
Corresponding author.
0960-894X/Ó 2016 Elsevier Ltd. All rights reserved.