Molecules 2021, 26, 764
8 of 12
Purities of synthetic intermediates after chromatographic purification were judged to
1
13
be >90% by analysis of H and C NMR spectra. Purities of final compounds were
NMR or HPLC analysis), after reverse-phase C18 chromatography.
≥
95%
(
4
.2. Synthesis of DFO-PEG -Et-ArN (1)
3 3
Synthesis of compound 2. 3-(4-Aminophenyl)propanoic acid (1.00 g, 6.05 mmoL) was
taken up in MeOH (30 mL) to which imidazole-1-sulphonyl azide HCl (1.52 g, 7.26 mmol),
K CO (2.26 g, 16.3 mmoL) and CuSO 5H O were added and the reaction mixture was
·
2
3
4
2
stirred for 16 h at rt. The reaction was monitored by TLC and on complete conversion
of the starting materials, the mixture was concentrated under reduced pressure. The
resulting crude residue was dissolved in H O (60 mL), acidified with concentrated HCl
2
and extracted with EtOAc (3
×
50 mL). The organic layers were combined, dried over
NaSO and concentrated under reduced pressure. The residue was then co-evaporated
4
1
with cyclohexane to give compound
400 MHz, CDCl3):
H, CH ), 2.67 (t, J = 7.7 Hz, 2H, CH ). C{ H} NMR (101 MHz, CDCl3):
3
(875 mg, 76% yield) as a pale-yellow solid. H NMR
(
δ 7.23–7.17 (m, 2H, CH ), 7.00–6.92 (m, 2H, CH ), 2.94 (t, J = 7.6 Hz,
Ar Ar
13
1
2
δ
178.5 (C=O),
2
2
1
38.4 (Cqt), 137.0 (Cqt), 129.8 (CH ), 119.3 (CH ), 35.6 (CH ), 30.1 (CH ). HR-ESI-MS
Ar
Ar
2
2
−
(
negative mode): m/z calcd. for C H N O [M − H] 190.0622, found 190.0621.
9
9
3
2
Synthesis of compound 4. Compound
2 (300 mg, 1.57 mmol) and N-[(dimethylamino)-
1
H-1,2,3-triazolo-[4,5- ]pyridin-1-ylmethylene]-N-methylmethanaminium hexafluorophos-
β
phate N-oxide (HATU; 895 mg, 2.36 mmoL) were taken up in dry DMF (4 mL) and stirred
under N for 20 min at rt. To a solution of the N-Boc-4,7,10-trioxa-1,13-tridecanediamine,
2
compound
3 (755 mg, 2.36 mmoL) dissolved in dry DMF (1 mL) was then added and the
mixture stirred for a further 10 min. At this time, DIPEA (1.09 mL, 6.28 mmol) was added,
and the reaction mixture was stirred at rt for 16 h under N (g). The reaction was monitored
2
by TLC, and on completion, the mixture was concentrated under reduced pressure. The
crude residue was dissolved in EtOAc (25 mL) and washed with H O (2
aqueous layers were then back-extracted with EtOAc (50 mL); the organic layers were
×
50 mL). The
2
combined and washed with brine, dried over NaSO and concentrated under reduced
4
pressure. The crude residue was then purified by flash chromatography on a bed of silica
[
1/1 (v/v) EtOAc/hexane] to give compound 4 (638 mg, 82% yield) as a yellow to orange
1
oil. H NMR (400 MHz, CDCl3):
δ 7.21–7.15 (m, 2H, CH ), 6.97–6.89 (m, 2H, CH ),
Ar Ar
6
.25 (s, 1H, NH), 4.92 (s, 1H, NH), 3.64–3.45 (m, 12H, CH ), 3.33 (q, J = 6.0 Hz, 2H, CH ),
2
2
3
.19 (q, J = 6.3 Hz, 2H, CH ), 2.92 (dd, J = 8.5, 6.9 Hz, 2H, CH ), 2.46–2.37 (m, 2H, CH ),
2
2
2
13
1
1
.75–1.69 (m, 4H, CH ), 1.42 (s, 9H, C(CH ) ). C{ H} NMR (101 MHz, CDCl3):
δ
171.9
2
3 3
(C=O), 156.2 (C=O), 138.1 (Cqt), 138.0 (Cqt), 129.9 (CHAr), 119.1 (CHAr), 79.1 (
C(CH ) ), 70.6
3 3
(
CH ), 70.6 (CH ), 70.3 (CH ), 70.1 (CH ), 69.6 (CH ), 38.6 (CH ), 38.4 (CH ), 38.1 (CH ),
2
2
2
2
2
2
2
2
3
1.2 (CH ), 29.8 (CH ), 28.9 (CH ), 28.6 (C(CH ) ). HR-ESI-MS (positive mode): m/z calcd.
2 2 2 3 3
+
for C H N O [M + Na] 516.2796, found 516.2792.
24
39
5
6
Synthesis of compound 5. Compound
4 (638 mg, 1.29 mmoL) was dissolved in
◦
CH Cl (10 mL) and cooled to 0 C, and then TFA (2 mL) was added drop-wise. The
2
2
reaction mixture was then allowed to warm slowly to rt and then stirred for 1 h. At this
time, TLC (10% MeOH in EtOAc) showed complete consumption of the starting material.
The reaction mixture was then concentrated under reduced pressure and purified by flash
column chromatography (C18, H O to 100% MeOH) to give compound
5
as a yellow oil
2
(
387 mg, 76% yield). 1H NMR (400 MHz, CDCl3):
d, J = 8.0 Hz, 2H, CH ), 6.59 (m, J = 5.6 Hz, 1H, NH), 3.68–3.60 (m, 7H, CH ), 3.57–3.53
δ 7.18 (d, J = 8.0 Hz, 2H, CH ), 6.93
Ar
(
Ar
2
(
m, 2H, CH ), 3.46 (t, J = 5.7 Hz, 2H, CH ), 3.28 (q, J = 6.4 Hz, 2H, CH ), 3.02 (t, J = 5.9 Hz,
2 2 2
2
H, CH ), 2.96–2.87 (m, 3H, CH ), 2.45 (t, J = 7.7 Hz, 2H, CH ), 1.85 (quint, J = 5.9 Hz, 2H,
2 2 2
13
1
CH ), 1.70 (quint, J = 6.2 Hz, 2H, CH ), 1.36–1.20 (m, 2H, NH ). C{ H} NMR (101 MHz,
2
2
2
CDCl3):
δ 172.7 (C=O), 138.0 (Cqt), 138.0 (Cqt), 129.9 (CHAr), 119.2 (CHAr), 70.5 (CH ), 70.5
2
(
2
CH ), 70.0 (CH ), 69.9 (CH ), 69.2 (CH ), 40.3 (CH ), 38.2 (CH ), 37.2 (CH ), 31.2 (CH ),
9.2 (CH ), 29.2 (CH ). HR-ESI-MS (positive mode): m/z calcd. for C H N O [M + H]
2 2 19 31 5 4
2 2 2 2 2 2 2 2
+
394.2449, found 394.2453.