Journal of Natural Products
Article
+
NMR spectra were obtained on a Bruker Avance III NMR
spectrometer ( H: 600 MHz, C: 151 MHz) equipped with a 5 mm
data, Table 1; HRESIMS m/z 1015.6201 [M + H] , (calcd for
C H N O , 1015.6187, Δ 1.38 ppm).
1
13
5
0
83 10 12
2
3
cryoprobe. All chemical shifts (δ) are referenced to the DMSO-d
Auyuittuqamide B (2). White powder; [α]
−4.9 (c 0.1,
6
D
1
13
residual solvent peaks [ H (DMSO-d ): 2.50 ppm; C (DMSO-d ):
MeOH); UV (MeOH) λmax 222 nm; IR (film) νmax 3282, 2960,
6
6
−
1 1
3
9.51 ppm].
1632, 1547, 1470, 1417, 1386, 1350, 1205, 1138, 1026 cm ; H and
C NMR data, Table 1; HRESIMS m/z 1001.6013 [M + H] (calcd
1
3
+
LC-HRMS of compounds and extracts was carried out with an ESI-
HRMS Exactive (Thermo Scientific) operating in positive mode with
a resolution of 30 000, monitoring a mass range from 190 to 2000
amu. Chromatography was carried out using a Core−Shell 100 Å C18
column (Phenomenex, Kinetex, 1.7 μm 50 × 2.1 mm) using a linear
for C H NO 1001.6030, Δ 1.70 ppm).
4
9
81
5,
2
3
Auyuittuqamide C (3). White powder; [α]
−1.6 (c 0.1,
D
MeOH); UV (MeOH) λmax 222 nm; IR (film) ν
3282, 2964,
max
−
1
1
13
1632, 1547, 1467, 1417, 1386, 1209, 1112 cm ; H and C NMR
solvent gradient from 95% H O/0.1% formic acid (solvent A):5%
+
2
data, Table 1; HRESIMS m/z 1029.6342 [M + H] (calcd for
C H NO , 1029.6343, Δ 0.01 ppm).
CH CN/0.1% formic acid (solvent B) to 100% solvent B over 4.8 min
3
5
1
85
4
−
1
followed by a hold for 3.2 min. A flow rate of 500 μL min and 10 μL
injection volume were used. Eluant was detected by ESIMS, ELSD,
and UV 200−600 nm.
23
Auyuittuqamide D (4). White powder; [α]
−1.8 (c 0.1,
D
MeOH); UV (MeOH) λmax 222 nm; IR (film) ν
3273, 2963,
max
−1
1
13
1
629, 1548, 1465, 1417, 1112, 1016 cm ; H and C NMR data,
Direct infusion (MS/MS analysis) high-resolution mass spectrom-
etry analysis was carried out on an LTQ Orbitrap Velos mass
spectrometer (Thermo Scientific) using an ESI ion source operating
in positive mode with a resolution of 30 000, monitoring a mass range
from 150 to 1000 amu. Selected ions were fragmented using a
collision-induced dissociation energy of 35 eV.
Automated flash chromatography was performed on a Teledyne
Combiflash Rf200 using C18 RediSep columns (24 g). HPLC
purifications were carried out on a Waters auto purification system
coupled with an evaporative light-scattering detector and UV detector.
All amino acid standards were purchased from Sigma-Aldrich. All
reagents were purchased from commercial sources and used without
further purification unless otherwise stated.
+
Table 1; HRESIMS m/z 1043.6550 [M + H] (calcd for C H NO
5
2
87
5,
1
043.6500, Δ 4.79 ppm).
Preparation of N-Me-D-Thr Standard. To a vial containing
Fmoc-N-Me-D-Thr(tbu)-OH (18 mg, 47 μmol, 1 equiv) in CH Cl (1
2
2
mL), TFA (1 mL) was added dropwise and the reaction was left to
stir at rt for 16 h. The reaction was neutralized using 1 N NaOH and
concentrated under reduced pressure before being resuspended in
H O (5 mL) and extracted with EtOAc (3 × 5 mL). The organic
2
layers were combined and subjected to purification through reversed
phase flash chromatography, yielding Fmoc-N-Me-D-Thr-OH as an
off-white solid (13 mg, yield 83%).
In a vial containing Fmoc-N-Me-D-Thr-OH (13 mg, 47 μmol, 1
equiv) in DMF (800 μL) piperidine (200 μL) was added and the
reaction was left to stir at rt for 16 h. The reaction was concentrated
under reduced pressure and taken forward for derivatization without
further purification.
Isolation of Sesquicillium microsporum RKAG 186. A marine
sediment core was collected using a sterile sediment sampler
(LaMotte) at low tide at a depth of 30 cm in Frobisher Bay,
Nunavut, Canada (63.72804° N 68.41989° W) in August 2011. The
core was transferred to a sterile 50 mL conical tube, brought back to
the lab on ice, and stored at −80 °C until processing. The sediment
was passed through a series of sieves (104 and 51 μM) and separated
based on particle size in order to increase the rate of isolation of fungi
originating from vegetative propagules embedded within substrate
particles as opposed to dormant spores. The separated particles were
Amino Acid Configuration by Marfey’s Analysis. Auyuittu-
qamides A−D (0.25 mg each) were hydrolyzed by stirring in 6 M HCl
(60 μL) at 80 °C for 6 h and neutralized with 1 M NaHCO solution.
3
N-(5-Fluoro-2,4-dinitrophenyl-5)-L-alaninamide (FDAA, 0.4 mg in
3
3
80 μL of acetone) was added to the reaction mixture and stirred at
7 °C for 2 h. The reaction was quenched with 1 N aqueous HCl (80
μL) and dried before the addition of MeOH for analysis by LC-
HRMS. LC-HRMS analyses was conducted using a Hypersil Gold
resuspended in sterile H O containing 0.2 g/L chloramphenicol and
2
18 g/L Instant Ocean and were serially diluted (100- and 1000-fold
100 Å column (Thermo, 1.9 μm C18 50 mm × 2.1 mm) and a flow
dilutions). A 10 μL aliquot from each dilution was pipetted into each
well of a 48-well plate containing YM and cottonseed oil agar and
incubated at 4 or 22 °C for three months. Emerging fungal colonies
were purified to obtain axenic cultures of isolate RKAG 186.
Identification of the fungus was performed by observation of the
culture phenotype (both macro- and micromorphology) and
sequence homology of the ITS1-5.8S-ITS2 region (sequence data
deposited in GenBank with the accession number MW149114).
Extraction and Purification. Isolate RKAG 186 was inoculated
into 15 mL of YM liquid seed medium at 22 °C and agitated at 200
rpm for 5 days. The seed culture (200 μL) was used to inoculate the
isolate onto 150, 100 × 15 mm Petri plates containing 20 mL of solid
PDA agar and grown for 21 days at 22 °C. The solid agar cultures
were roughly cut up, pooled, and extracted with EtOAc. The extract
rate of 400 μL/min. The following method was used: 0−55 min 95%
H O/0.1% formic acid (solvent A):5% CH CN/0.1% formic acid
2
3
(solvent B) to 60% solvent A:40% solvent B, 55−57 min 60% solvent
A:40% solvent B to 100% solvent B, 57−60 min 100% solvent B.
Retention times were compared to derivatized amino acid standards
to determine the amino acid configurations. Chromatograms of
Antimicrobial Assays. Compounds 1−4 were tested for
antimicrobial activity according to Clinical Laboratory Standards
Institute testing standards in a 96-well plate microbroth dilution assay
19
as previously described. Compounds were tested against the human
microbial pathogens methicillin-resistant Staphyloccocus aureus ATCC
3
3591, vancomycin-resistant Enterococcus faecium EF379, Staph-
ylococcus warneri ATCC 17917, Pseudomonas aeruginosa ATCC
4210, and Candida albicans ATCC 14035. Optical density was
was evaporated to dryness and partitioned between 80% CH CN/
3
H O and 100% hexane. The CH CN layer was collected and
2
3
1
evaporated to dryness in vacuo to give a CH CN extract (138 mg).
3
recorded at Tzero and Tfinal using a Thermo Scientific Varioskan Flash
plate reader at 600 nm to determine growth inhibition after
incubation for 22 h (37 °C).
The extract was fractionated using automated medium-pressure
reversed-phase flash chromatography with a linear gradient from 20%
aqueous MeOH to 100% MeOH over 15 min on a 15.5 g C18
column (High Performance GOLD RediSep Rf) with a flow rate of 30
mL/min. The semipure fraction eluting at 9.5 min was subjected to
reversed-phase HPLC using a Gemini 110A C18 column (5 μm 250
Cytotoxicity Assays. Compounds 1−4 were tested for cytotox-
icity against adult human epidermal keratinocytes (HEKa), human
breast adenocarcinoma cells (ER −) (ATCC HTB-26), and human
breast adenocarcinoma cells (ER + ) (ATCC MCF-7) in triplicate in
×
10 mm, Phenomenex) and 20 min isocratic elution with 65%
19
aqueous CH CN (0.1% formic acid), resulting in the purification of 1
a 96-well cell culture plate as described previously. Cell viability was
determined 24 h after treatment using the redox dye Alamar Blue to
extrapolate cell viability. Fluorescence was monitored using a Thermo
Scientific Varioskan Flash plate reader at 560/12 excitation, 590 nm
emission both at time zero and 4 h after Alamar Blue addition.
3
(
4.1 mg), 2 (1.5 mg), 3 (2 mg), and 4 (3 mg).
Auyuittuqamide A (1). White powder; [α]
2
3
−3.6 (c 0.1,
D
MeOH); UV (MeOH) λmax 222 nm; IR (film) ν
1
3270, 2965,
max
−
1
1
13
627, 1546, 1418, 1340, 1292, 1112, 1018 cm ; H and C NMR
5
9
J. Nat. Prod. 2021, 84, 56−60