5156
C. Zhang et al. / Tetrahedron 68 (2012) 5152e5156
(
pH¼7.0) at room temperature under sonication for 2 h. The
Supplementary data
Fmoc-Xaa-OH functionalized oligonucleotides were purified by
gel filtration and reverse-phase HPLC and lyophilized. The Fmoc
protecting group was removed by suspending the purified
oligonucleotides in 0.1 M NaOH for 1 h, the amino acids conjugated
oligonucleotides were purified by gel filtration and reverse-phase
HPLC and characterized by MALDI-TOF mass spectrometry
References and notes
(
using the mixture of 3-hyroxylpyridine-2-carboxylic acid (3-
1. (a) Kemp, D. S. Biopolymers 1981, 20, 1793e1804; (b) Kemp, D. S.; Carey, R. I. J.
Org. Chem. 1993, 58, 2216e2222.
HPA) and ammonium citrate as matrix). Glycine conjugated
2. Dawson, P. E.; Muir, T. W.; Clark-Lewis, I.; Kent, S. B. H. Science 1994, 266,
oligonucleotide: observed mass 10,806ꢃ11 (expected: 10,801
776e779.
þ
[
MþcitrateþH] ); valine conjugated oligonucleotide: observed
3. For recent examples, see: (a) Hirano, K.; Macmillan, D.; Tezuka, K.; Tsuji, T.;
Kajihara, Y. Angew. Chem., Int. Ed. 2009, 48, 9557e9560; (b) Sohma, Y.; Hua, Q.
X.; Whittaker, J.; Weiss, M. A.; Kent, S. B. H. Angew. Chem. 2010, 122,
þ
mass 10,809ꢃ11 (expected: 10,811 [MþmatrixþNa] ); proline
conjugated oligonucleotide: observed mass 10,765ꢃ11 (expected:
5621e5625; Angew. Chem., Int. Ed. 2010, 49, 5489e5493; (c) Wu, Y. W.; Oes-
þ
1
0,788 [MþmatrixþH] ); alanine conjugated oligonucleotide: ob-
terlin, K.; Tan, K. T.; Waldmann, H.; Alexandrov, K.; Goody, R. S. Nat. Chem. Biol.
2010, 6, 534e540; (d) Scheuermann, J. C.; Alonso, A. G. D.; Oktaba, K.; Ly-Hartig,
N.; McGinty, R. K.; Fraterman, S.; Muir, T. W.; Muller, J. Nature 2010, 465,
þ
served mass 10,653ꢃ11 (expected: 10,645 [MþNa] ).
2
43e547.
. Johnson, E. C. B.; Kent, S. B. H. J. Am. Chem. Soc. 2006, 128, 6640e6646.
5. McCaldon, P.; Argos, P. Proteins: Struct., Funct., Genet. 1988, 4, 99e122.
0
.2.3. TAM-linked internal standard oligonucleotide. 21 bp 3 -Amino
4
4
DNA oligonucleotide (up to 20 nmol) was combined with TAM NHS
ester (1 mg) in 200 mM sodium phosphate (pH¼7.0) at room
temperature for 2 h. The functionalized oligonucleotide was puri-
fied by gel filtration and reverse-phase HPLC.
6
. For selected examples, see (a) Perlstein, M. T.; Atassi, M. Z.; Cheng, S. H. Biochim.
Biophys. Acta, Protein Struct. 1971, 446, 1105e1109; (b) Bernardes, G. J. L.;
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Crich, D.; Banerjee, A. J. Am. Chem. Soc. 2007, 129, 10064e10065.
7. For recent review on chemoselective ligation of peptides, see Hackenberger, C.
P. R.; Schwarzer, D. Angew. Chem., Int. Ed. 2008, 47, 10030e10074.
8
9
. For recent highlight on cysteinyl-free ligation, see: Macmillan, D. Angew. Chem.
4
.3. DNA-templated reactions
2006, 118, 7830e7834; Angew. Chem., Int. Ed. 2006, 45, 7668e7672.
. For selected examples, see (a) Canne, L. E.; Bark, S. J.; Kent, S. B. H. J. Am. Chem.
Soc. 1996, 118, 5891e5896; (b) Low, D. W.; Hill, M. G.; Carrasco, M. R.; Kent, S. B.
H.; Botti, P. Proc. Natl. Acad. Sci. U.S.A. 2001, 98, 6554e6559; (c) Offer, J.; Boddy,
C.; Dawson, P. E. J. Am. Chem. Soc. 2002, 124, 4642e4646; (d) Macmillan, D.;
Anderson, D. W. Org. Lett. 2004, 6, 4659e4662; (e) Lu, Y.-A.; Tam, J. P. Org. Lett.
2005, 7, 5003e5006; (f) Brik, A.; Yang, Y. eY.; Ficht, S.; Wong, C.-H. J. Am. Chem.
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gew. Chem., Int. Ed. 2007, 46, 5975e5979; (h) Brik, A.; Wong, C.-H. Chem.dEur. J.
Reactions were performed as described in Figs. 1 and 2. Starting
materials and products were ethanol-precipitated from the re-
action mixture, analyzed by denaturing PAGE, quantified as de-
scribed above.
2
1
007, 13, 5670e5675; (i) Li, X.; Lam, H. Y.; Zhang, Y.; Chan, C. K. Org. Lett. 2010,
2, 1724e1727.
0. Brudno, Y.; Liu, D. R. Chem. Biol. 2009, 16, 265e276.
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12. Jacobsen, M. F.; Ravnsbaek, J. B.; Gothelf, K. V. Org. Biomol. Chem. 2010, 8,
0e52.
4
.4. Oligonucleotide sequences
1
1
Sequences are as follows:
Template DNA in Fig. 1: 5 AGTGGGGATTGTGAGGGCTTGGGAATT
0
5
CAGCTC-NH
2
;
13. Meguellati, K. G.; Koripelly, S. L. Angew. Chem., Int. Ed. 2010, 49, 2738e2742.
14. Gartner, Z. J.; Liu, D. R. J. Am. Chem. Soc. 2001, 123, 6961e6963.
0
Template DNA in Fig. 2: 5 AGTGGGGATTGTGAGGGCTTGGGAATT
1
1
1
5. Li, X.; Liu, D. R. Angew. Chem., Int. Ed. 2004, 43, 4848e4870.
6. Grossmann, T.; Strohbach, A.; Seitz, O. ChemBioChem 2008, 9, 2185e2192.
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CAGCTC-NHCO-Xaa1-NH
2
; Matched auxiliary DNA in Figs. 1 and 2:
0
5
protected thiol-CONH-GACCTGAATTCCCAA; Mismatched auxil-
0
iary DNA in Fig. 1: 5 protected thiol-CONH-GTCCTCTATTGCCTA;
TAM-linked internal standard DNA in Figs. 1 and 2:
GACGGCTTGGGAATTCAGGTC-NH-TAM.
7849e7856.
0
18. Summerer, D.; Marx, A. Angew. Chem., Int. Ed. 2002, 41, 89e90.
5
19. Rozenman, M.; McNaughton, B.; Liu, D. Curr. Opin. Chem. Biol. 2007, 11,
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59e268.
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2
2
2
Acknowledgements
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Science 2004, 305, 1601e1605; (b) Kanan, M. W.; Rozeman, M. M.; Sakurai, K.;
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This work is supported by National Natural Science Foundation
of China (21002003 and 91013003), Ministry of Science and
Technology Basic Research Program (2011CB809100) and Beijing
Nova program (2010B002). C.Z. would like to thank the Hui-Chun
Chin and Tsung-Dao Lee Chinese Undergraduate Research En-
dowment (CURE) for generous support. This project is partially
supported by National Fund for Fostering Talents of Basic Sciences
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(
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