A. Asadipour et al. / European Journal of Medicinal Chemistry 70 (2013) 623e630
629
coumarin), 3.52 (s, 2H, CH
.96e2.92 (m, 2H, 2CHN piperidine), 2.02e2.00 (m, 2H, 2CHN
piperidine), 1.74e1.69 (m, 3H, CHCH CH piperidine and
CHCH N piperidine), 1.60e1.55 (m, 4H, NCH CH and 2CHCH
piperidine). MS (m/z, %) 406 (M , 7), 315 (33), 217 (53),189 (38),106
36), 91 (100). Anal. Calcd for C24 : C, 70.92; H, 6.45; N, 6.89.
Found: C, 70.78; H, 6.33; N, 6.71.
2
benzylic), 3.45e3.38 (m, 2H, NCH
2
),
simulations were finally carried out by means of a batch script
using Autodock vina (ver. 1.1.1) [21] with default parameters and
the exhaustiveness value set as 80. The active site for docking was
established as a box at geometrical center of the native ligand
present in the above mentioned PDB structure with the di-
mensions 40,40,40. The coordinates x, y, z, for the center of grid
box were set as 2.023, 63.29 and 67.062, respectively. The lowest
energy conformation of each ligandeenzyme complex was
selected for analyzing the interactions between AChE and the
inhibitor. The results were visualized using Chimera 1.6 [22]
(Molecular graphics and analyses were performed with the
UCSF Chimera package. Chimera is developed by the Resource for
Biocomputing, Visualization, and Informatics at the University of
California, San Francisco).
2
2
2
N
2
2
2
2
2
N
þ
(
26 2 4
H N O
4
.1.1.11. N-[2-(1-Benzylpiperidin-4-yl)ethyl]-7-methoxy-2-oxo-2H-
chromene-3-carboxamide (10e). Yield: 65%; pale yellow solid; mp
ꢃ
ꢄ1
n
1
68e169 C; IR (KBr, cm
)
max: 3360 (NH), 1706 and 1646 (C]O).
, 400 MHz) : 8.80 (s, 1H, H coumarin), 8.75 (br
s, 1H, NH), 7.59e7.57 (m, 3H, 2H Ph, H coumarin), 7.25e7.23 (m, 3H
Ph), 6.94 (d, 1H, J ¼ 7.5 Hz, H coumarin), 6.86 (s, 1H, H coumarin),
.08 (s, 2H, CH benzylic), 3.91 (s, 3H, OCH ), 3.57e3.28 (m, 4H,
NCH and 2CHN piperidine), 2.60e2.52 (m, 2H, 2CHN piperidine),
.05e1.92 (m, 2H, 2CHCH piperidine), 1.79e1.45 (m, 3H,
1
H NMR (DMSO-d
6
d
4
5
6
8
4
2
3
2
4.3. AChE and BuChE inhibition assay
2
2
N
NCH
2
CH
2
and CHCH
2
CH
2
N piperidine), 1.27e1.22 (m, 2H, 2CHCH
2
N
Acetylcholinesterase (AChE, E.C. 3.1.1.7, Type V-S, lyophilized
þ
piperidine). MS (m/z, %) 420 (M , 9), 404 (5), 388 (23), 172 (26), 91
powder, from electric eel, 1000 unit), butyrylcholinesterase (BuChE,
E.C. 3.1.1.8, from equine serum) and butyrylthiocholine iodide (BTC)
were provided from SigmaeAldrich. 5,5-Dithiobis-(2-nitrobenzoic
acid) (DTNB), potassium dihydrogen phosphate, dipotassium
hydrogen phosphate, potassium hydroxide, sodium hydrogen car-
bonate, and acetylthiocholine iodide were purchased from Fluka.
The solutions of the target compounds were prepared in a mixture
(
100). Anal. Calcd for C25
28 2 4
H N O : C, 71.41; H, 6.71; N, 6.66. Found:
C, 71.33; H, 6.87; N, 6.45.
4
.1.1.12. N-[2-(1-Benzylpiperidin-4-yl)ethyl]-7-hydroxy-2-oxo-2H-
chromene-3-carboxamide (10f). Yield: 62%; pale yellow solid; mp
ꢃ
ꢄ1
) n
185e186 C; IR (KBr, cm
max: 3449 (OH), 3328 (NH), 1720 and
648 (C]O). H NMR (DMSO-d , 500 MHz) : 8.89 (br s, 1H, NH),
.77 (s, 1H, H coumarin),
coumarin), 7.58 (d, 1H, J ¼ 7.5 Hz, H
.29e7.24 (m, 5H, Ph), 6.86e6.81 (m, 2H, H and H coumarin), 3.61
s, 2H, CH benzylic), 3.50e3.41 (m, 2H, NCH ), 2.66e2.61 (m, 2H,
CHN piperidine), 2.04e2.00 (m, 2H, 2CHN piperidine), 1.92e1.87
CH N piperidine and 2CHCH N piperidine), 1.60e
.54 (m, 4H, NCH CH and 2CHCH N piperidine). MS (m/z, %) 406
M , 14), 315 (40), 217 (83), 189 (33), 172 (21), 91 (100). Anal. Calcd
for C24 : C, 70.92; H, 6.45; N, 6.89. Found: C, 70.98; H, 6.63;
N, 7.11.
1
1
8
7
(
6
d
of DMSO (1 ml) and methanol (9 ml) and diluted in 0.1 M KH
2 4
PO /
4
5
K
2
HPO buffer (pH 8.0) to obtain final assay concentrations. The
4
6
8
ꢃ
temperature condition was adjusted as 25 C during all experi-
ments. Five different concentrations were tested for each com-
pound in triplicate to obtain the range of 20%e80% inhibition for
AChE and BuChE. The assay medium was composed of 3 ml of 0.1 M
2
2
2
(
m, 3H, CHCH
2
2
2
1
(
2
2
2
phosphate buffer pH 8.0, 100
.5 unit/mL enzyme solution (AChE, E.C. 3.1.1.7, Type V-S, lyophi-
lized powder, from electric eel). 100 l of each tested compound was
added to the assay tube and incubated at 25 C for 15 min prior to
adding 20 l of substrate (acetylthiocholine iodide). The rate of
ml of 0.01 M DTNB, and 100 ml of
þ
2
26 2 4
H N O
m
ꢃ
m
4
.1.1.13. N-[2-(1-Benzylpiperidin-4-yl)ethyl]-8-methoxy-2-oxo-2H-
absorbance change was measured at 412 nm for 6 min on the
baseline obtained by blank reading of the solutions with non-
enzymatic hydrolysis. The blank was contained 3 ml buffer,
00 ml water, 100 ml DTNB and 20 ml substrate. The IC50 values were
determined graphically from inhibition curves (log inhibitor con-
centration versus percent of inhibition). Spectrophotometric mea-
chromene-3-carboxamide (10g). Yield: 72%; pale yellow solid; mp
ꢃ
ꢄ1
) n
2
12e213 C; IR (KBr, cm
max: 3340 (NH), 1736 and 1660 (C]O).
, 400 MHz) : 8.97 (s, 1H, H coumarin), 8.63e
.57 (m, 2H, NH and H
coumarin), 8.51 (d, 1H, J ¼ 8.4 Hz, H
coumarin), 7.55 (d, 1H, J ¼ 8.4 Hz, H coumarin), 7.39e7.31 (m, 5H
Ph), 3.61 (s, 2H, CH benzylic), 3.51 (s, 3H, OCH ), 3.09e2.95 (m, 2H,
NHCH ), 2.18e2.04 (m, 2H, 2CHN piperidine), 1.78e1.72 (m, 2H,
CHN piperidine), 1.64e1.59 (m, 2H, 2CHCH N piperidine), 1.47e
.40 (m, 2H, NCH CH ), 1.27e1.22 (m, 3H, CHCH CH N piperidine
and 2CHCH N piperidine). MS (m/z, %) 420 (M , 5), 217 (91), 172
39), 106 (36), 91 (100). Anal. Calcd for C25 : C, 71.41; H,
1
H NMR (DMSO-d
8
6
d
4
2
6
5
7
2
3
surements were performed on
a UV Unico Double Beam
2
Spectrophotometer [23]. The described method was also taken for
BuChE inhibition assay.
2
1
2
2
2
2
2
þ
2
(
28
H N
2
O
4
4.4. Cellular biology
6
.71; N, 6.66. Found: C, 71.27; H, 6.61; N, 6.45.
4.4.1. Cell culture, differentiation, and treatment conditions
4.2. Molecular modeling studies
Rat undifferentiated PC12 cells were cultured in RPMI 1640
media with 10% FCS containing 100 units/ml penicillin and 100 mg/
The conformational search studies were performed with
ml streptomycin (All from GIBCO, Grand Island, NY, USA). Cells were
trypsinated and 10 cells were plated on each well of 96-well cul-
ture plates in RPMI 1640 media. For induction of neuronal differ-
entiation, PC12 cells were cultured in serum-free media (RPMI 1640
media containing 100 units/ml penicillin and 100 mg/ml strepto-
mycin) for 2 days, thereafter their medium changed to above serum
free medium containing NGF (50 ng/ml, Sigma) and continued for 5
days until neurite outgrowth was observed under inverted micro-
scope (Supplementary material) [24]. Differentiated PC12 cells
4
HyperChem7 (Hypercube Inc.) using AM1 semi-empirical method.
complex bound with inhibitor E2020 (donepezil). Afterward, the
water molecules and co-crystallized ligand were eliminated from
the protein structure and polar hydrogens were added. The Koll-
man charge was calculated and the protein was saved as pdbqt
format. The structure of the target compounds was prepared us-
Openbabel version (2.3.1) [19]. The autodock format of protein
was also prepared using Autodock Tools (ver. 1.5.4) [20]. Docking
were pretreated with different concentrations (1, 10 and 100
mM) of
the compounds for 3 h before treatment with H (250 M). The
2
O
2
m
occurrence of apoptosis was established after staining with DAPI,
and cell viability was measured after 24 h by using the MTT assay.