Crystal Growth & Design
Article
(17.0 mL, 196.5 mmol) was prepared in 50.0 mL of DMF, and the
mixture was stirred overnight at room temperature. The solution was
evaporated, and 40.0 mL of water was added and extracted with DCM
(3 × 30 mL). The organic layers were combined and evaporated to
dryness. The crude product was obtained as a yellow-white solid,
which was purified by column chromatography (eluent: DCM with
133.06, 132.24, 126.11, 46.52, 40.81, 38.72, 24.29, 14.65, 14.00.
HRMS (APCI): calcd for C35H46N10O6Na [M + Na] +, 725.3494;
found, 725.3473.
Synthesis of 1,1′-(Hexane-1,6-diyl)bis(3-(2-(2-methyl-4-nitro-1H-
imidazol-1-yl)ethyl)urea) (4). The precipitate was then washed with
ethyl acetate to obtain the pure product as a white powder. Yield:
1
1
79.0%. H NMR (400 MHz, DMSO-d6) δ 8.21 (s, 2H), 5.94 (t, J =
methanol gradient, 0−0.5%). Yield: 65.0%. H NMR (chloroform-d,
5.8 Hz, 4H), 4.01 (t, J = 5.7 Hz, 4H), 3.37−3.29 (m, 4H), 2.92 (q, J =
6.5 Hz, 4H), 2.31 (s, 6H), 1.30 (m, 4H), 1.18 (m, 4H). 13C{1H}
NMR (100 MHz, DMSO-d6) δ 157.85, 145.34, 145.30, 122.27, 46.78,
39.50, 39.08, 29.88, 26.03, 12.45. HRMS (APCI): calcd for
C20H32N10O6Na [M + Na]+, 531.2398; found, 531.2400.
Synthesis of 1,1′-(1,3-Phenylenebis(propane-2,2-diyl))bis(3-(2-
(2-methyl-4-nitro-1H-imidazol-1-yl)ethyl)urea) (5). The crude com-
pound was purified by washing with diethyl ether and ethyl acetate.
Yield: 79.0%. 1H NMR (400 MHz, DMSO-d6) δ 8.20 (s, 2H), 7.27 (s,
1H), 7.22−7.09 (m, 1H), 7.11−6.89 (m, 2H), 6.28 (s, 2H), 5.91 (t, J
= 6.0 Hz, 2H), 3.98 (t, J = 5.8 Hz, 4H), 3.34−3.27 (m, 4H), 2.32 (s,
6H), 1.47 (s, 12H). 13C{1H} NMR (100 MHz, DMSO-d6) δ 156.84,
148.16, 145.33, 145.30, 127.22, 122.30, 122.23, 121.19, 54.23, 46.81,
39.08, 29.85, 12.52. HRMS (APCI): calcd for C26H36N10O6Na [M +
Na]+, 607.2711; found, 607.2711.
Synthesis of 1,1′-(Methylenebis(2,6-diethyl-4,1-phenylene))bis(3-
(2-(2-methyl-4-nitro-1H-imidazol-1-yl)ethyl)-urea) (6). Purification
was performed by washing the crude compound with dichloro-
methane to yield a white powder. Yield: 80.0%. 1H NMR (400 MHz,
DMSO-d6) δ 8.18 (s, 2H), 7.39 (s, 2H), 6.92 (s, 4H), 6.26 (m, 2H),
4.04 (t, J = 5.8 Hz, 4H), 3.78 (s, 2H), 3.48−3.37 (m, 4H), 2.44−2.36
(m, 8H), 2.35 (s, 6H), 1.02 (t, J = 7.5 Hz, 12H). 13C{1H} NMR (100
MHz, DMSO-d6) δ 157.07, 145.75, 145.68, 142.46, 139.50, 132.91,
126.63, 122.98, 47.35, 41.28, 24.76, 24.30, 15.05, 13.10. HRMS
(APCI): calcd for C35H46N10O6Na [M + Na]+, 725.3494; found,
725.3459.
Synthesis of Isometronidazole (2-(2-Methyl-4-nitro-1H-imidazol-
1-yl)ethan-1-ol) (14). A solution of 2-methyl-4-nitro-1H-imidazole
(0.30 g, 2.4 mmol), potassium carbonate (0.97 g, 7.9 mmol),
bromoethanol (830 μL, 11.8 mmol), and potassium iodide (0.39 g,
2.4 mmol) was added to DMF (20.0 mL) in a round bottomed flask,
and the mixture was stirred overnight at room temperature. The
solvent was evaporated and dried, the mixture was purified by column
chromatography in DCM using a methanol gradient (0.0−0.5%), and
the product was recrystallized from ethanol/diethyl ether. Yield:
81.0%. 1H NMR (400 MHz, methanol-d4) δ 8.08 (s, 1H), 4.15−4.08
(m, 2H), 3.87−3.80 (m, 2H), 2.45 (s, 3H). 13C{1H} NMR (100
MHz, methanol-d4) δ 145.96, 145.48, 121.00, 60.32, 49.17, 11.48.
HRMS (APCI): calcd for C6H9N3O3Na [M + H]+, 194.0536; found,
194.0537.
400 MHz) δ 7.77 (s, 1H), 4.36 (t, J = 6.1 Hz, 2H, 3.64 (t, J = 6.1 Hz,
2H), 2.47 (s, 3H). 13C{1H} NMR (100 MHz, chloroform-d) δ
146.83, 144.97, 119.62, 48.32, 29.21, 13.33. HRMS (APCI): calcd for
C6H8N3O2BrNa [M + Na]+, 255.9692; found, 255.9693.
Synthesis of 1-(2-Azidoethyl)-2-methyl-4-nitro-1H-imidazole
(11). The reaction procedure was similar to compound 8. Compound
10 (3.2 g, 13.7 mmol), sodium azide (1.3 g, 20.5 mmol), and 40.0 mL
of DMF. Yield: 98.0%. 1H NMR (400 MHz, chloroform-d) δ 7.76 (s,
1H), 4.08 (t, J = 6.1 Hz, 2H), 3.73 (t, J = 6.1 Hz, 2H), 2.45 (s, 3H).
13C{1H} NMR (100 MHz, chloroform-d) δ 146.75, 145.04, 119.80,
50.86, 46.12, 13.16. HRMS (APCI): calcd for C6H8N6O2Na [M +
Na]+, 219.0601; found, 219.0598.
Synthesis of 2-(2-Methyl-4-nitro-1H-imidazol-1-yl)ethan-1-
amine44 (12). The reaction procedure was similar to compound 9.
Compound 11 (2.25 g, 11.5 mmol), triphenylphosphine (6.17 g, 23.6
mmol), and THF/water (20/2.5 mL). The amine was recrystallized as
a hydrochloride salt in acidic ethanol solution (12·HCl). Yield: 73.0%.
1H NMR (400 MHz, DMSO-d6) δ 8.43 (s, 1H), 8.37 (s, 3H), 4.32 (t,
J = 6.1 Hz, 2H), 3.25 (t, J = 6.1 Hz, 2H), 2.40 (s, 3H). 13C{1H} NMR
(100 MHz, DMSO-d6) δ 145.59, 145.50, 122.36, 43.69, 38.28, 12.76.
HRMS (APCI): calcd for C6H10N4O2Na [M + Na]+, 193.0696;
found, 193.0692.
Synthesis of Bis(3,5-diethyl-4-isocyanatophenyl)methane (13).
The bis(isocyanate) was synthesized according to a reported
procedure.46 Yield: 95.0%. 1H NMR (400 MHz, chloroform-d) δ
6.87 (s, 4H), 3.85 (s, 2H), 2.65 (q, J = 7.6 Hz, 8H), 1.22 (t, J = 7.6
Hz, 12H). 13C{1H} NMR (100 MHz, chloroform-d) δ 138.91,
138.49, 127.96, 126.94, 41.12, 25.70, 14.24.
General Procedure for the Synthesis of Bis(urea) Compounds.
The amine hydrochloride (2.1 equiv) was dissolved in chloroform by
adding triethylamine (4.0 equiv) at room temperature. A solution of
the corresponding diisocyanate (1.0 equiv) was added dropwise to the
above mixture and was refluxed overnight under a nitrogen
atmosphere. The precipitate formed was filtered and stirred with
saturated sodium bicarbonate solution for 24 h. The mixture was
filtered, and the residue was washed with a copious amount of water
and dried to isolate the product.
Synthesis of 1,1′-(Hexane-1,6-diyl)bis(3-(2-(2-methyl-5-nitro-1H-
imidazol-1-yl)ethyl)urea) (1). The crude compound was recrystal-
1
lized from ethanol. Yield: 75.0%. H NMR (400 MHz, DMSO-d6) δ
Gelation Details. Gelation Test. In a standard 7.0 mL vial (ID =
15.0 mm), an appropriate amount of the gelator and 1.0 mL of
suitable solvent were added, and the vial was sealed. The mixture was
then sonicated and heated until a clear solution was obtained. The
solution was left undisturbed for gelation, and a vial-inversion test was
performed to confirm gelation.
8.00 (s, 2H), 6.01−5.90 (m, 4H), 4.29 (t, J = 5.7 Hz, 4H), 3.37−3.28
(m, 4H), 2.90 (q, J = 6.4 Hz, 4H), 2.38 (s, 6H), 1.29 (m, 4H), 1.24−
1.15 (m, 4H). 13C{1H} NMR (100 MHz, DMSO-d6) δ 157.23,
150.88, 137.82, 132.50, 45.73, 38.55, 38.21, 29.31, 25.46, 13.12.
HRMS (APCI): calcd for C20H32N10O6Na [M + Na]+, 531.2398;
found, 531.2403.
Minimum Gel Concentration (MGC). The gel was prepared
following the above procedure by dissolving the compounds in 1.0
mL of solvent. An additional amount of the solvent was added in
portions, and the gelation process was repeated until a trace amount
of the solvent was observed on the top of the gel. The excess solvent
was removed, and MGC of the gelator was determined by calculating
the weight percent of the compound.
Tgel Experiment. The appropriate amount of the gelator was taken
in a standard 7.0 mL vial, and 1.0 mL of solvent was added. The
mixture was sonicated and heated to dissolve and left undisturbed. A
tiny spherical glass ball was carefully put on the top of the gel after 24
h and was heated in an oil bath fitted with a thermosensor and
magnetic stirrer. The temperature of the oil bath was steadily raised
by 10.0 °C per minute. The temperature at which the glass ball
touched the bottom of the vial was recorded as Tgel.
Synthesis of 1,1′-(1,3-Phenylenebis(propane-2,2-diyl))bis(3-(2-
(2-methyl-5-nitro-1H-imidazol-1-yl)ethyl)urea) (2). The crude ma-
terial was recrystallized from isopropanol. Yield: 72.0%. 1H NMR
(400 MHz, DMSO-d6) δ 8.00 (s, 2H), 7.27 (s, 1H), 7.24−7.14 (m,
1H), 7.08 (d, J = 7.7 Hz, 2H), 6.28 (s, 2H), 5.91 (t, J = 6.0 Hz, 2H),
4.27 (t, J = 5.4 Hz, 4H), 3.37−3.28 (m, 4H), 2.41 (s, 6H), 1.47 (s,
12H). 13C{1H} NMR (100 MHz, DMSO-d6) δ 156.22, 150.91,
147.51, 137.84, 132.52, 126.69, 121.80, 120.63, 53.65, 45.84, 37.84,
29.26, 13.25. HRMS (APCI): calcd for C26H36N10O6Na [M + Na]+,
607.2711; found, 607.2712.
Synthesis of 1,1′-(Methylenebis(2,6-diethyl-4,1-phenylene))bis(3-
(2-(2-methyl-5-nitro-1H-imidazol-1-yl)ethyl)urea) (3). The crude
compound was recrystallized in ethanol. Yield: 75.0%. 1H NMR
(400 MHz, DMSO-d6) δ 7.98 (s, 2H), 7.39 (s, 2H), 6.91 (s, 4H),
6.26 (s, 2H), 4.32 (t, J = 5.7 Hz, 4H), 3.78 (s, 2H), 3.45 (s, 4H), 2.44
(s, 6H), 2.39−2.32 (m, 8H), 1.03 (t, J = 7.5 Hz, 12H). 13C{1H} NMR
(100 MHz, DMSO-d6) δ 156.62, 151.47, 141.99, 139.28, 138.55,
Rheology. Rheological experiments were performed in nitro-
benzene. The mechanical strength of the gelators was measured using
C
Cryst. Growth Des. XXXX, XXX, XXX−XXX