Synthesis and Activity of Selenophenfurin
J ournal of Medicinal Chemistry, 1997, Vol. 40, No. 11 1735
Tiazofurin and selenazofurin were obtained through the Drug
Synthesis & Chemistry Branch, Developmental Therapeutics
Program, Division of Cancer Treatment, National Cancer
Institute (Bethesda, MD).
(t, J ) 7.1 Hz, 3H, OCH2CH3), 2.00-2.10 (3s, 9H, OCOCH3),
4.10-4.35 (m, 5H, H-5′, H-4′, OCH2CH3), 5.38 (dd, J ) 4.5,
7.0 Hz, 1H, H-3′), 5.50 (t, J ) 3.8 Hz, 1H, H-2′), 5.65 (d, J )
3.0 Hz, 1H, H-1′), 7.62 (s, 1H, H-4), 9.03 (s, 1H, H-2). Anal.
(C18H22O9Se) C, H.
Tetr a iod oselen op h en e (2). To a mixture of selenophene
(48 g, 0.366 mol), acetic acid (1.8 L), and mercury acetate (466.5
g, 1.464 mol) heated at 95 °C was added iodine (373.08 g, 1.47
mol) portionwise under stirring. The heating was continued
for 30 min. After cooling at room temperature, the mixture
was diluted with water (2.7 L), stirred for 20 min, and then
stored for 15 h at 4 °C. The solid formed was filtered, washed
with water, and added to a water solution (3.6 L) of KI (358.8
g). The mixture was stirred for 2 h at room temperature, and
the solid was filtered, washed with water, and recrystallized
from DMF/H2O to give 2 (226.4 g, 97.4%) as a white solid: mp
205-210 °C (lit.16 mp 208 °C). 13C-NMR (Me2SO-d6): δ 92.5
(C-3, C-4), 110.58 (C-2, C-5). Anal. (C4I4Se) C.
3-Iod oselen op h en e (3). To a stirred mixture of 2 (226 g,
0.356 mol) and acetic acid (80% solution in water, 4.5 L) was
added portionwise zinc powder (122.4 g, 1.87 mol). The
mixture was heated under reflux for 2 h, cooled at room
temperature, and filtered. The aqueous phase was neutralized
with a saturated solution of NaHCO3 and extracted with ethyl
ether (400 mL × 3). The combined organic phases were dried
over anhydrous Na2SO4 and evaporated to dryness to give an
oily residue which was purified by distillation: bp 83 °C/1.5
mmHg (lit.16 bp 56 °C/1 mmHg); 50.3 g, 55%.
Selen op h en e-3-ca r bon itr ile (4). Tetrakis(triphenylphos-
phine)palladium(0) (4.39 g, 3.8 mmol) was added under
nitrogen atmosphere to a stirred solution containing 3 (50 g,
0.195 mol) and trimethylsilyl cyanide (38.9 mL, 0.292 mol) in
anhydrous triethylamine (388 mL, 2.78 mol). The reaction
mixture was heated under reflux for 30 min. After cooling to
room temperature, the mixture was partitioned between water
and benzene. The organic phase was separated, dried over
anhydrous Na2SO4, and evaporated to dryness under vacuum
to give an oily residue which was purified by distillation: bp
80 °C/1 mmHg (lit.15 bp 90-91 °C/10 mmHg); 21.55 g, 71%.
Selen op h en e-3-ca r boxylic Acid (5).15 A mixture of 4 (21
g, 0.134 mol) and concentrated HCl (500 mL) was heated under
reflux for 1 h. After cooling at room temperature the precipi-
tated solid was collected and recrystallized from water to give
5 (15.8 g, 67%) as a white solid.
Eth yl Selen op h en e-3-ca r boxyla te (6). A mixture of 5
(15 g, 85.69 mmol) and SOCl2 (30 mL, 0.41 mol) was heated
at 100 °C for 45 min. After evaporation, to the oily residue
cooled at 0 °C was added anhydrous ethanol (20 mL), and the
mixture was stirred at room temperature for 5 h. After
evaporation in vacuo, the ester 6 was obtained as a yellow oil
(17.4 g, 100%). TLC (CHCl3): Rf ) 0.72. 1H-NMR (Me2SO-
d6): δ 1.30 (t, J ) 7.1 Hz, 3H, OCH2CH3), 4.25 (q, J ) 7.1 Hz,
2H, OCH2CH3), 7.7 (dd, J ) 1.3, 5.4 Hz, 1H, H-4), 8.22 (dd, J
) 2.5, 5.5 Hz, 1H, H-5), 9.05 (dd, J ) 1.3, 2.5 Hz, 1H, H-2).
Anal. (C7H8O2Se) C, H.
Evaporation of the last fraction gave 10 as a colorless oil
(6.6 g, 11%). TLC (CHCl3): Rf ) 0.37. 1H-NMR (DMSO-d6):
δ 1.30 (t, J ) 7.1 Hz, 3H, OCH2CH3), 2.0-2.10 (m, 18H,
OCOCH3), 4.15-4.45 (m, 8H, H-4′a, H-4′b, 2H-5′a, 2H-5′b,
OCH2CH3), 5.20 (m, 3H, H-2′a, H-3′a, H-3′b), 5.40 (m, 1H,
H-2′b), 5.81 (d, J ) 3.3 Hz, 1H, H-1′b), 6.01 (d, J ) 3.3 Hz,
1H, H-1′a), 7.63 (s, 1H, H-4). Anal. (C29H36O16Se) C, H.
Eth yl 2-â-D-Ribofu r a n osylselen op h en e-3-ca r boxyla te
(11â), Eth yl 2-r-D-Ribofu r a n osylselen op h en e-3-ca r boxy-
la te (11R), a n d Eth yl 5-â-D-Ribofu r a n osylselen op h en e-
3-ca r boxyla te (12â). The oily mixture of 8â,R and 9â (13 g)
was treated with sodium ethoxide in ethanol (273 mL, 15.12
mmol) for 1 h at room temperature. To the reaction mixture
was added 0.55 g of Dowex 50w × 8 resin (H+) (washed with
ethanol), and the suspension was stirred for 1 h. The resin
was filtered off, washed with ethanol, and discarded. The
filtrate was evaporated to dryness, and the residue was
chromatographed on a silica gel column with CHCl3-MeOH
(96:4) as eluent to give 11â as a white solid (0.57 g, 6%): mp
65-67 °C. TLC (CHCl3-MeOH, 96:4): Rf ) 0.35. 1H-NMR
(DMSO-d6): δ 1.30 (t, J ) 7.1 Hz, 3H, OCH2CH3), 3.6 (m, 2H,
H-5′), 3.76 (m, 1H, H-4′), 3.82 (m, 2H, H-2′, H-3′), 4.25 (q, J )
7.1 Hz, 2H, OCH2CH3), 4.82 (t, J ) 5.4 Hz, 1H, OH), 4.94 (d,
J ) 5.5 Hz, 1H, OH), 5.02 (d, J ) 5.3 Hz, OH), 5.52 (d, J ) 3.5
Hz, 1H, H-1′), 7.60 (d, J ) 5.8 Hz, 1H, H-4), 8.04 (d, J ) 5.8
Hz, 1H, H-5). Anal. (C12H16O6Se) C, H.
Evaporation of the following fraction gave 11R (0.187 g, 2%)
as a colorless oil. TLC (CHCl3-MeOH, 96:4): Rf ) 0.3. 1H-
NMR (DMSO-d6): δ 1.30 (t, J ) 7.1 Hz, 3H, OCH2CH3), 3.50,
3.60 (2m, 2H, H-5′), 3.75 (m, 1H, H-4′), 3.82 (m, 1H, H-3′), 3.96
(m, 1H, H-2′), 4.25 (q, J ) 7.1 Hz, 2H, OCH2CH3), 4.85 (t, J )
5.4 Hz, 1H, OH), 5.0 (m, 1H, OH), 5.20 (d, J ) 7.3 Hz, 1H,
OH), 5.55 (dd, J ) 5.4, 5.1 Hz, 1H, H-1′), 7.60 (d, J ) 5.8 Hz,
1H, H-4), 8.02 (d, J ) 5.8 Hz, 1H, H-5). Anal. (C12H16O6Se)
C, H.
Evaporation of the last fraction gave 12â (4.7 g, 50%) as
white needles (crystallized from CHCl3): mp 115-116 °C. TLC
(CHCl3-MeOH, 96:4): Rf ) 0.26. 1H-NMR (DMSO-d6): δ 1.30
(t, J ) 7.1 Hz, 3H, OCH2CH3), 3.50 (t, J ) 5.0 Hz, 2H, H-5′),
3.70 (m, 1H, H-4′), 3.82 (q, J ) 4.5 Hz, 1H, H-3′), 3.92 (m, 1H,
H-2′), 4.22 (q, J ) 7.1 Hz, 2H, OCH2CH3), 4.80 (d, J ) 6.9 Hz,
1H, OH), 4.85 (t, J ) 5.4 Hz, 1H, OH), 5.05 (d, J ) 4.6 Hz,
1H, OH), 5.20 (d, J ) 7.2 Hz, 1H, H-1′), 7.52 (d, J ) 1.4 Hz,
1H, H-4), 8.9 (d, J ) 1.4 Hz, 1H, H-5). 13C-NMR (Me2SO-d6):
δ 14.6 (CH3CH2), 60.8 (CH3CH2), 62.4 (C-5′), 72.0 (C-3′), 78.7
(C-2′), 81.1 (C-1′), 86.0 (C-4′), 125.3 (C-4), 135.0 (C-5), 140.1
(C-2), 153.9 (C-3), 163.0 (CdO). Anal. (C12H16O6Se) C, H.
Eth yl 5-r-D-Ribofu r a n osylselen op h en e-3-ca r boxyla te
(12R). Compound 12R was obtained from 9R (2 g, 4.33 mmol)
as described for 11â, as a colorless oil (1.14 g, 79%), after
chromatography on a silica gel column eluting with CHCl3-
MeOH (94:6). TLC (CHCl3-MeOH, 96:4): Rf ) 0.10. 1H-NMR
(DMSO-d6): δ 1.30 (t, J ) 7.1 Hz, 3H, OCH2CH3), 3.45 (m,
1H, H-5′), 3.60 (m, 1H, H-5′), 3.80 (m, 1H, H-4′), 3.97 (m, 1H,
H-3′), 4.18 (m, 1H, H-2′), 4.22 (q, J ) 7.1 Hz, 2H, OCH2CH3),
4.70 (t, J ) 5.7 Hz, 1H, OH), 4.95 (m, 1H, OH), 5.2 (d, J ) 2.5
Hz, 1H, H-1′), 5.28 (d, J ) 3.7 Hz, 1H, OH), 7.60 (s, 1H, H-4),
9.0 (s, 1H, H-2). 13C-NMR (DMSO-d6): δ 14.4 (CH3CH2), 60.5
(CH3CH2), 61.7 (C-5′), 72.7 (C-2′, C-3′), 79.2 (C-1′), 82.2 (C-4′),
127.3 (C-4), 133.7 (C-5), 142.1 (C-2), 149.4 (C-3), 163.1 (CdO).
Anal. (C12H16O6Se) C, H.
E t h yl 2-(2,3,5-Tr i-O-a cet yl-â-D-r ib ofu r a n osyl)selen o-
p h en e-3-ca r boxyla te (8â), Eth yl 2-(2,3,5-Tr i-O-a cetyl-r-
D-r ibofu r a n osyl)selen op h en e-3-ca r boxyla te (8R), Eth yl
5-(2,3,5-Tr i-O-a cet yl-â-D-r ib ofu r a n osyl)selen op h en e-3-
ca r boxyla te (9â), Eth yl 5-(2,3,5-Tr i-O-a cetyl-r-D-r ibofu r a -
n osyl)selen op h en e-3-ca r boxyla te (9R), a n d Eth yl 2,5-
Bis(2,3,5-t r i-O-a cet yl-â-D-r ib ofu r a n osyl)selen op h en e-3-
ca r boxyla te (10). To a stirred solution of ethyl selenophene-
3-carboxylate (6) (17 g, 83.7 mmol) in dry 1,2-dichloroethane
(160 mL) were added 1,2,3,5-tetra-O-acetyl-â-D-ribofuranose
(7) (26.6 g, 83.7 mmol) and SnCl4 (8.3 mL), and the mixture
reacted at room temperature for 18 h. The reaction mixture
was diluted with H2O, neutralized with NaHCO3, and ex-
tracted with CH2Cl2 (100 mL × 3). The combined CH2Cl2
extracts were dried over anhydrous Na2SO4 and evaporated
to dryness. The obtained residue was chromatographed on a
silica gel column eluting with CHCl3-n-hexane (80:20). Three
main fractions were separated. From the fast eluate, a
mixture of 8â,R and 9â was obtained as a colorless oil (13.9 g,
36%). TLC (CHCl3-n-hexane, 80:20): Rf ) 0.36.
Eth yl 2,5-Di-â-D-r ibofu r a n osylselen op h en e-3-ca r boxy-
la te (13). Compound 13 was prepared from 10 (3.8 g, 5.55
mmol) by the above method. The reaction residue was purified
by flash chromatography using CHCl3-MeOH (90:10) to give
13 as a foam (2.17 g, 56%). TLC (CHCl3-MeOH, 90:10): Rf
) 0.15. 1H-NMR (DMSO-d6): δ 1.30 (t, J ) 7.1 Hz, 3H,
OCH2CH3), 3.48 (t, J ) 5.1 Hz, 2H, H-5′b), 3.58 (m, 2H, H-5′a),
3.70-3.90 (m, 6H, H-4′a, H-4′b, H-3′a, H-3′b, H-2′a, H-2′b),
4.25 (q, J ) 7.1 Hz, 2H, OCH2CH3), 4.70 (d, J ) 7.2 Hz, 1H,
H-1′b), 4.82 (t, J ) 5.3 Hz, 1H, OH), 4.95 (d, J ) 4.7 Hz, 1H,
Evaporation of the following fraction gave 9R as an oil (2.32
g, 6%). TLC (CHCl3): Rf ) 0.43. 1H-NMR (DMSO-d6): δ 1.30