A. Geersing, et al.
Bioorganic&MedicinalChemistryLettersxxx(xxxx)xxx–xxx
O
OH
O
O
H
N
N
N
H
OH
N
NH2
H2N
H
N
N
O
+
N
N
N
N
H
N
H2N
2
N
N
O
O
O
O
1
N
O
X
O
O
X
N
Et
DMSO,
o/n
3N,
r.t.,
O
O
=
=
X
X
3
2 ( )
( )
CH
4
S
N
OH
N
O
O
H
H
N
H
N
X
N
N
N
N
H
OH
X
N
H
N
N
N
O
O
N
N
O
H
X= CH2 (N4Py-C-C-FA)
X= S (N4Py-S-S-FA)
H2N
N
Scheme 1. Synthesis of N4Py conjugates N4Py-C-C-FA and N4Py-S-S-FA.
prepare both N4Py-FA conjugates exclusively as their γ-regioisomers.
often results in varying mixtures of α-,γ- and bis- functionalization
products together with starting material. In addition, purification can
be tedious. Therefore, both N4Py-S-S-FA and N4Py-C-C-FA, which is
the conjugate that contains a non-cleavable linker, were prepared in
high-yielding synthesis via formation of a pyrofolic acid derivative
The DNA cleavage activities of the in situ generated iron complexes
of N4Py conjugates were determined as a measure for their inherent
oxidation activity. Supercoiled pUC18 plasmid DNA was incubated with
1 μM iron complex at 37 °C in presence of DTT as reducing agent (Fig.
S5). Extensive DNA cleavage was observed for both N4Py-conjugates,
with turnover frequencies of both conjugates similar to that of Fe(II)-
N4Py. Notably, the cleavage of the disulphide bond of N4Py-S-S-FA
under these conditions does not affect its ability to cut DNA. These
results thus indicate that the intrinsic oxidation chemistry of the N4Py
moiety in both conjugates is unchanged, resulting in DNA cleavage
rates of both conjugates that are comparable to Fe(II)-N4Py (Fig. S6).
In vitro binding competition assays were performed with the FR
expressing KB cell line to compare relative binding affinities of the
N4Py-conjugates with that of FA itself. Affinities of FR for N4Py-C-C-FA
and N4Py-S-S-FA were assessed by Fluorescence Assisted Cell Sorting
(FACS) competition experiments with Folate-FITC and compared with
FA. The folate receptor has a good affinity for both conjugates, as de-
picted by relative binding affinities of FR for N4Py-C-C-FA and N4Py-S-
S-FA, which are approximately only 2-fold lower than for FA (Figs. 1
First, an N4Py derivative containing a propylamine linker (1) was
synthesized using a method that was previously reported by our group
(Scheme S1).11 Subsequently, FA was aminated (2) using a γ-re-
gioselective method similar to the one described by Luo et al (Scheme
S2).50 Conjugation of N4Py to FA was then achieved using dis-
uccinimidyl suberate (DSS, 3), as a non-cleavable linker, or dithiobis
(succinimidyl propionate) (DSP, 4), the redox-sensitive disulfide
analogue of 3. Due to the fact that this coupling method is based on a
homobifunctional linker and both 1 and 2 contain a primary amine
functionality, it was anticipated that homocoupling of N4Py or the FA
would lead to formation of byproducts. Indeed, stoichiometric addi-
tion of all three components gave the preferred product together with
the homocoupled products as major impurities. Repeating the reaction
with only 0.5 eq. of 2, followed by removal of the homocoupling
product of N4Py by washing with MeOH, resulted in almost pure
product. The resulting products N4Py-C-C-FA and N4Py-S-S-FA were
subsequently purified by preparative reversed phase (RP)-HPLC to
obtain pure compounds (Figs. S1 and S2) suitable for biological ex-
periments.
The effect N4Py-FA conjugates on the metabolic activity of cancer
cells was evaluated by the MTS assay. The compounds were used as free
ligand: It is assumed that they are able to bind an iron ion in the cellular
environment, as shown before.14 First, experiments were performed
under low folate (LF) medium conditions (RPMI-1640 medium, 10%
dialyzed FCS, supplemented with 2 nM FA)53–55 in three different cell
lines, each with different FR surface expression levels: high FR ex-
pressing KB cells (30–50 pmol/106 cells), moderately FR expressing
IGROV-1 cells (∼1 pmol/106 cells) and low FR expressing MCF7 cells
(FR generally undetectable).56–59
The stability and in situ formation of the iron complexes of both
conjugates were tested in tris-HCl buffer (pH 8.5) in presence of two
equivalents of Fe(ClO4)2 and 5 mM of glutathione (GSH), since cellular
levels of GSH are in the range of 1–10 mM.51,52 Analysis by LC-MS
showed that 5 min after addition of GSH, a large amount of N4Py-S-S-
FA was already converted to the corresponding cleavage products (Figs.
S3 and S4, Table S1, Chart S1), with complete disappearance of the
signal for N4Py-S-S-FA after 20 min. After that, no changes in peak
ratios were observed for another 3 h. In contrast, N4Py-C-C-FA was
found to be intact after a period of 5 h. In addition, both conjugates are
capable of coordinating iron. It therefore appears that the iron oxida-
tion chemistry does not negatively affect the disulphide bond cleavage
by GSH.
The cellular response toward FA and Fe(II)-N4Py at concentrations
varying between 1 and 150 μM was tested with incubation times of
24 h, 48 h and 72 h (Fig. S8). The IC50 values for Fe(II)-N4Py are in the
range of 30 μM for KB and MCF7 cell lines, while being slightly lower
for IGROV1 cells (20 μM) after 24 h. KB and MCF7 cells were more
strongly affected when the incubation times were increased to 48 h and
72 h with reduced metabolic activity and IC50 values in the range of
20 μM, while the metabolic activity of IGROV1 was barely affected by
longer incubation times. As control, all cell lines were incubated with
FA, which did not cause any appreciable decrease in metabolic activity
compared to solvent control over a period of 72 h. Repeating the
2