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B.C. Yallur et al. / Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 222 (2019) 117192
The elemental analyses of Carbon, Hydrogen and Nitrogen were car-
ried out on a Perkin Elmer CHN 2400 analyzer. The melting points of the
synthesized compounds were measured in evacuated capillary tubes.
Infrared spectra recorded between 4000 and 400 cm−1 range (KBr
disc) on a Nicolet protage 460 FT-IR spectrophotometer. Electronic
spectra recorded in DMF solvent on Elico SL 159 UV–Visible spectropho-
tometer. NMR spectra were recorded in d6-DMSO taking tetra methyl
silane as internal standard on Brukerat 400 and 100 MHz respectively
for 1H and 13C.
Hitachi spectrofluorimeter Model F-2700 equipped with 150 W
Xenon lamp was employed for the fluorescence measurements. Slit
width of the instrument was kept at 5 nm. JASCO-J-715 spectropolarim-
eter was used to record the CD graphs. The CD recordings were carried
out in 0.1 cm thickness cell and by keeping 0.2 nm intervals in the wave-
length range of 200–250 nm. The average of three scans was taken for
each CD spectrum. The absorption spectra were collected on a dual
beam Analytic Jena Specord 200 Plus UV–vis spectrophotometer oper-
ated with a 150 W Xenon lamp. A slit width of 5 nm was kept through-
out the absorption studies. FTIR spectra were registered on a Thermo
Nicolet-5700 FTIR spectrometer (Waltham, MA, USA) via the attenuated
total reflection with resolution of 4 cm−1 60 scans. Gel electrophoresis
experiments were carried out using UVITEC, Cambridge.
Fig. 1. Crystal Structure of BSA.
Nutlin 3, cis-imidazoline analogs are used in the better treatment of
cancer [15,16]. Similarly, 1H-4, 5-dihydroimidazoles are used as antihy-
pertensive [17], anti-helminthic [18,19] and analgesic agents [20]. Other
1H-4, 5-dihydroimidazole derivatives were studied as hypoglycemic
compounds [21]. In recent times, the importance of dihydroimidazole
moieties especially in biochemistry is increasing due to their biological
activities [22–26]. They are also used in organic synthesis as synthetic
intermediates [27,28], chiral auxiliaries [29,30] and chiral ligands
[31–33].
In the light of biological applications of sulphur and nitrogen con-
taining compounds, we synthesized the compound, hydro bromide
salt of 5,6-dihydroimidazo[2,1-b]thiazole-2-carbaldehyde (ITC)
(Fig. 2) and we studied its antibacterial activity and interaction with
BSA.
2.2. Methods
2.2.1. Synthesis of ITC
To a stirred solution of 2-imidazolidinethione (0.250 g, 0.0024 mol)
in ethanol was added an ethanolic solution of 2-bromomalonaldehyde
(0.370 g, 0.0024 mol) drop wise over a period of 15 min and stirred con-
stantly for an hour at room temperature and then at 80 °C for 2 h. The
yellow colored solid obtained was filtered and washed several times
with acetone, then dried under vacuum. Reaction completion was mon-
itored on TLC. Yield: 85% (0.320 g), MP: 205 °C. The Reaction Scheme for
the synthesis of ITC is given in Fig. 3. The supplementary data supports
the structure of the compound.
2. Experimental
2.1. Materials and equipment
2.2.2. Anti-bacterial activity
The reagents and solvents were purchased commercially and used
without further purification unless otherwise noted. 1, 1, 3, 3-
Tetramethoxy propane (99%), 2-Imidazolidinethione (98%) were pur-
chased from Sigma-Aldrich, Bangalore. All bacterial strains used were
received from Department of Biotechnology, MS Ramaiah Institute of
Technology and MS Ramaiah Medical College Bangalore. Bovine serum
albumin (BSA, Fraction V) was purchased from Sigma Chemical Com-
pany, St Louis, USA and pUC18 DNA from Genei, Bangalore. The com-
pound ITC was prepared and purified as per the procedure given and
the structure of the compound was confirmed by various spectroscopic
techniques (Supplementary data). A 0.1 M phosphate buffer of pH 7.4
containing 0.15 M NaCl was prepared and the solutions of ITC and BSA
were prepared in the phosphate buffer based on their molecular
weights. The other chemicals used were of analytical grade and bi-
distilled water was utilized for all the experiments.
A loop full of cultured bacterial cells from the nutrient agar plates
was incubated into a nutrient broth (50 ml) and incubated at 37 °C for
18 h. 100 μl of 18 h bacterial cultures were spread on nutrient agar
media using a sterile glass spreader. Agar dilution method was followed
to fix the Minimum Inhibitory Concentration (MIC) of the compound.
The bacterial strains were developed at 37 °C for 8-10 h and maintained
on nutrient agar bath. The ITC was dissolved in DMSO to get stock solu-
tion. Commercially available bactericide Ciprofloxacin was used as stan-
dard. Based on agar dilution method the concentrations of standard and
ITC were fixed at 9 mg/ml. The sterilized petri-dishes were used and
growth inhibition zones formed around disc were measured. DMSO
was used as control and showed no inhibitions in studies. The diameters
of inhibition zones are in mm.
2.2.3. ITC-BSA interactions
Preliminary experiments were carried out to fix the concentration of
BSA and found that 2.5 μM was optimal. The concentration of ITC was
kept wide-ranging from 0 to 100 μM. The fluorescence spectra were ac-
quired in the wavelength range of 290–500 nm, at three different tem-
peratures, 293 K, 300 K and 308 K. 296 nm was fixed as the excitation
wavelength for all the fluorescence measurements.
N
. HBr
S
N
O
2.2.3.1. The displacement experiment. The displacement experiments
were conducted by taking the site probes namely warfarin, ibuprofen
and digitoxin for sites I, II and III, respectively. The spectra were re-
corded at fixed concentrations of BSA and site probe (2.5 μM each).
The fluorescence quenching titrations were carried out as described in
the Section 2.2.3 at room temperature and the binding constants
H
Fig. 2. The Structure of ITC.