Notes
Journal of Natural Products, 2005, Vol. 68, No. 5 771
Fungal Material. The collection and identification of
7.07 (1H, d, J ) 16.0 Hz, H-3), 7.11 (1H, d, J ) 16.0 Hz, H-2);
13C NMR (125 MHz, DMSO-d6) δ 25.5 (2C, C-6, C-7), 52.6 (1-
OCH3), 126.9 (C-3), 137.9 (C-2), 163.9 (C-1), 160.6 (C-4), 169.8
(2C, C-5, C-8); (+)-LRESIMS m/z (rel int) 228 (20), 250 (100);
(+)-HRESIMS m/z 250.03208 (C9H9NO6Na [M + Na]+ requires
250.03221).
Xylaria sp. (FRR 5657) are detailed elsewhere.12
Fermentation, Extraction, and Isolation. The fungal
isolate was initially grown in three culture tubes each contain-
ing malt extract broth (10 mL) at 30 °C for 5 days. These
cultures were transferred to three conical flasks (500 mL) each
containing sterilized damp white rice (50 g of rice plus 100
mL of H2O), and the fermentation was allowed to proceed
under static conditions at 25 °C for 28 days. EtOAc extraction
of the cultures followed by removal of the solvent in vacuo
yielded a dark green gum (1.57 g). This extract was preab-
sorbed to C18 silica, then loaded onto a C18 flash column, and
a 20% stepwise gradient was performed from 100% H2O to
100% CH3OH. The 20% CH3OH/80% H2O elution was further
purified by C18 preparative HPLC using a linear gradient from
100% H2O to 50% CH3OH/50% H2O in 50 min at a flow rate
of 8 mL/min. Fraction 14 (11.6 mg, tR ) 38-41 min) was
subjected to phenyl preparative HPLC using a linear gradient
from 100% aqueous TFA (1.0%) to 100% CH3OH in 20 min at
a flow rate of 6 mL/min and yielded pure (-)-xylariamide A
(1, 0.9 mg, tR ) 17.2 min).
Synthesis of (+)-Xylariamide A (2). N,O-Bis(trimethyl-
silyl)acetamide (439 µL, 1.8 mmol) was added to (E)-but-2-
enedioic acid 2,5-dioxo-pyrrolidin-1-yl ester methyl ester (4,
68 mg, 0.3 mmol) and 3-chloro-L-tyrosine (3, 195 mg, 0.9 mmol)
in dry DMF (3 mL), and the reaction was heated at 55 °C for
24 h. Upon cooling, the DMF was removed in vacuo and the
residue was preabsorbed to C18. The C18 material was added
to a C18 SPE cartridge, and 20% stepwise elutions were run
from 100% aqueous TFA (0.1%) to 100% CH3OH (10 mL
washes). Fractions 3 and 4 were combined, then subjected to
Sephadex LH-20 chromatography using 100% CH3OH as the
eluent at a flow rate of 4.5 mL/min. All resulting fractions were
analyzed by TLC and identical fractions combined to yield pure
(+)-xylariamide A (2, 47 mg, 48% yield) as a stable yellow gum:
[R]23 +17° (c 0.313, CH3OH); UV (CH3OH) λmax (log ꢀ) 207
D
(-)-Xylariamide A (1): stable yellow gum; [R]24 -22° (c
D
(4.18), 218 (sh) (4.08), 278 (3.51) nm; IR νmax (NaCl) 3400-
0.060, CH3OH); UV (CH3OH) λmax (log ꢀ) 202 (4.05), 217 (sh)
(3.74), 278 (3.12) nm; IR νmax (NaCl) 3600-3100, 1716, 1667,
3100, 1716, 1667, 1541, 1512, 1437, 1293, 1227, 1197, 1167,
1
1056, 1020, 977, 818 cm-1; H NMR (500 MHz, DMSO-d6) δ
1
1544, 1511, 1438, 1293, 1197, 1024, 975, 826 cm-1; H NMR
2.77 (1H, dd, J ) 14.0, 9.5 Hz, H-7a), 3.00 (1H, dd, J ) 14.0,
4.5 Hz, H-7b), 3.71 (3H, s, 13-OCH3), 4.44 (1H, ddd, J ) 9.5,
8.5, 4.5 Hz, H-8), 6.54 (1H, d, J ) 16.0 Hz, H-12), 6.85 (1H, d,
J ) 8.5 Hz, H-5), 6.97 (1H, d, J ) 8.5 Hz, H-6), 7.06 (1H, d,
J ) 16.0 Hz, H-11), 7.16 (1H, s, H-2), 8.77 (1H, d, J ) 8.5 Hz,
8-NH), 10.08 (1H, brs, 4-OH); 13C NMR (125 MHz, DMSO-d6)
δ 35.6 (C-7), 52.0 (13-OCH3), 54.1 (C-8), 116.4 (C-5), 119.1 (C-
3), 128.5 (C-12), 128.6 (C-6), 129.1 (C-1), 130.2 (C-2), 137.1 (C-
11), 151.6 (C-4), 162.6 (C-10), 165.4 (C-13), 172.4 (C-9); (-)-
LRESIMS m/z (rel int) 168 (20), 167 (7), 282 (10), 284 (3), 326
(100), 328 (33); (-)-HRESIMS m/z 326.04419 (C14H13NO635Cl
[M - H]- requires 326.04369).
(500 MHz, DMSO-d6) δ 2.77 (1H, dd, J ) 14.5, 10.0 Hz, H-7a),
3.00 (1H, dd, J ) 14.5, 5.0 Hz, H-7b), 3.71 (3H, s, 13-OCH3),
4.46 (1H, ddd, J ) 10.0, 8.0, 5.0 Hz, H-8), 6.54 (1H, d, J )
15.5 Hz, H-12), 6.84 (1H, d, J ) 8.5 Hz, H-5), 6.97 (1H, dd,
J ) 8.5, 1.5 Hz, H-6), 7.05 (1H, d, J ) 15.5 Hz, H-11), 7.17
(1H, d, J ) 1.5 Hz, H-2), 8.80 (1H, d, J ) 8.0 Hz, 8-NH), 9.95
(1H, brs, 4-OH); 13C NMR (125 MHz, DMSO-d6) δ 35.5 (C-7),
52.0 (13-OCH3), 53.8 (C-8), 116.4 (C-5), 119.2 (C-3), 128.6 (C-
12), 128.6 (C-6), 128.9 (C-1), 130.2 (C-2), 136.9 (C-11), 151.6
(C-4), 162.7 (C-10), 165.4 (C-13), 172.3 (C-9); (-)-LRESIMS
m/z (rel int) 168 (15), 167 (5), 282 (10), 284 (3), 326 (100), 328
(33); (-)-HRESIMS m/z 326.04257 (C14H13NO635Cl [M - H]-
requires 326.04369).
Brine Shrimp Lethality Assay. Brine shrimp eggs were
obtained from Bio-Marine Aquafauna and were hatched in
artificial seawater prepared from Instant Ocean (Aquarium
Systems). The hatching, harvesting, and dispensing of nauplii
were performed in a manner similar to that described by Solis
et al.19 Compounds 1 and 2 were added to live nauplii (10-20
per vial, VT ) 500 µL) in glass vials (2 mL), and following 24
h of drug treatment the brine shrimp lethality was measured
by counting the number of dead (nonmotile) nauplii per vial.
Compounds 1 and 2 were tested in triplicate at 20 and 200
µg/mL and were solubilized in 100% DMSO with a final DMSO
concentration of 2% in each vial. The brine shrimp responded
typically when treated with the laboratory standards, lisso-
clinotoxins E and F.20 For example, the LD50 of lissoclinotoxin
F toward the brine shrimp was ∼5 µg/mL.
Synthesis of (E)-But-2-enedioic Acid Monomethyl Es-
ter (5). The commercial reagent (E)-but-2-enedioic acid di-
methyl ester (6, 1.44 g, 10 mmol) was dissolved in acetone (70
mL) at room temperature, and 1 N LiOH (10 mL, 10 mmol)
was slowly added over 15 min to the stirred solution. The
reaction was stirred for 1 h, diluted with 2 N HCl (200 mL),
saturated with NaCl, and then extracted with EtOAc (3 × 200
mL). The EtOAc layer was slowly evaporated, and the result-
ing precipitate was filtered and dried to yield pure (E)-but-2-
enedioic acid monomethyl ester (5, 1.13 mg, 87% yield) as a
white amorphous solid: mp 142-143 °C (lit. mp 141-141.5
°C);16,17 UV (CH3OH) λmax (log ꢀ) 209 (4.15) nm; IR νmax (NaCl)
1803, 1775, 1751, 1656, 1441, 1425, 1362, 1314, 1286, 1204,
1
1101, 1049, 977, 962, 886, 809, 759, 736, 651 cm-1; H NMR
(500 MHz, DMSO-d6) δ 3.72 (3H s, 1-OCH3), 6.69 (2H, s, H-2,
H-3), 13.18 (1H, brs, 4-OH); 13C NMR (125 MHz, DMSO-d6) δ
52.3 (1-OCH3), 132.3 (C-2), 134.7 (C-3), 165.1 (C-1), 165.7 (C-
4); (-)-LRESIMS m/z (rel int) 129 (100); (-)-HRESIMS m/z
129.01930 (C5H5O4 [M - H]- requires 129.01933).
Acknowledgment. The author thanks the Eskitis Insti-
tute and Griffith University (NRG) for research funding, and
Drs. J. I. Pitt, A. Hocking, and N. Tran-Dinh from Food Science
Australia for fungal identification. Dr. J. Mitchell from Griffith
University is acknowledged for obtaining the HRESIMS data.
Synthesis of (E)-But-2-enedioic Acid 2,5-Dioxo-pyrro-
lidin-1-yl Ester Methyl Ester (4). (E)-But-2-enedioic acid
monomethyl ester (5, 260 mg, 2 mmol), EDCI (768 mg, 4
mmol), and N-hydroxysuccinimide (690 mg, 6 mmol) were
dissolved in dry CH3CN (5 mL), and the reaction was stirred
at room temperature for 24 h. The reaction mixture was
preabsorbed to silica, then loaded onto a glass column and
flushed with 100% EtOAc (50 mL). The EtOAc wash was
evaporated to dryness, redissolved in 100% DCM, and injected
onto a MPLC silica-packed column using isocratic conditions
of 40% EtOAc/60% hexanes at a flow rate of 6 mL/min for 30
min. This yielded pure (E)-but-2-enedioic acid 2,5-dioxo-
Supporting Information Available: 1H and 13C NMR spectra
and LRESIMS data for compounds 1, 2, 4, and 5. This material is
References and Notes
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12.0 min) as a white amorphous solid: mp 93-95 °C (lit. mp
93.5-94.5 °C);15 UV (CH3OH) λmax (log ꢀ) 213 (3.47), 263 (sh)
(2.53) nm; IR νmax (NaCl) 1722, 1682, 1633, 1440, 1413, 1317,
1286, 1266, 1177, 997, 918, 778, 653, 562 cm-1; 1H NMR (500
MHz, DMSO-d6) δ 2.85 (4H, s, H-6, H-7), 3.78 (3H s, 1-OCH3),
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