15-Norlyngbyapeptin A and Lyngbyabellin D
J ournal of Natural Products, 2003, Vol. 66, No. 5 597
toxin A, and the 8% a mixture of apratoxin A, lyngbyastatin
2, lyngbyabellin A, 1, and 3. This 8% fraction was separated
by RP-HPLC on an Ultracarb column (250 × 10 mm, 80%
aqueous CH3CN, 3 mL/min, detection at 220 nm) and provided
a mixture of 1 and 3 (tR 7.5 min). Further purification using
65% aqueous CH3CN afforded pure 15-norlyngbyapeptin A (1)
(0.8 mg, tR 14.2 min) and lyngbyabellin D (3) (0.8 mg, tR
18.9 min).
constants and chemical shifts with other members of this
family. Specifically H-12 exhibits two large couplings of
approximately 7 Hz, almost identical to the J H,H for
dolabellin, whose configuration was determined by syn-
thesis.8,9 The stereochemistry of C-13 is probably S as with
all other members of this family.8,10,11
3
There are few reports of γ-amino-â-hydroxy acids, and
no general method for determining the configuration of the
chiral centers. However, reports in the literature indicated
that 4-amino-3-hydroxy-5-methylheptanoic acid, found in
the didemnins, underwent an epimerization at C-3 via an
acid-catalyzed dehydration/hydration sequence, and that
significant quantities of the intermediate R,â-unsaturated
acid existed after prolonged hydrolysis.12 This suggested
the absolute configuration of C-29 could be determined by
acid hydrolysis and subsequent ozonolysis, with oxidative
workup, to D- or L-valine. This was indeed the case and
chiral HPLC showed unambiguously that C-29 was derived
from L-valine. Fortuitously, H-28 and H-29 exhibited an
8.4 Hz coupling, enabling the relative configuration to be
determined by a NOE experiment,13 specifically between
29-NH and H-27, thus completing the stereochemical as-
signment of lyngbyabellin D (3) as 6R,7S,12R,13S,24R,-
28S,29S.
15-Nor lyn gbya p ep tin A (1): white powder: [R]22 -31°
D
(c 0.4, MeOH); UV (MeOH) λmax (log ꢀ) 201 (4.20), 226 (4.02)
nm; IR (film) νmax 3367, 2849, 1635, 1456, 1338 cm-1; 1H NMR
and 13C NMR data, see Table 1; HRFABMS m/z [M + Na]+
706.3649 (calcd for C36H53N5O6SNa, 706.3614 ∆ 3.5 mDa).
Lyn gbya bellin D (3): white powder: [R]25 +20° (c 0.4,
D
MeOH); UV (MeOH) λmax (log ꢀ) 202 (7.31), 223 (6.81) nm; IR
1
(film) νmax 3365, 1731, 1650, 1538, 1455, 1232, 1097 cm-1; H
1
NMR, 13C NMR, H-1H COSY, and HMBC data, see Table 2;
HRMALDI-MS m/z [M + Na]+ 918.2386 (calcd for C38H55
35Cl2N3O13S2Na, 918.2445 ∆ 5.9 mDa).
-
Absolu te Ster eoch em istr y of 15-Nor lyn gbya p ep tin A
(1). A 0.1 mg sample of 1 was degraded as described6b for 2
and analyzed by chiral HPLC [column Chirex phase 3126 (D)
(4.6 × 250 mm), Phenomenex, 0.8 mL/min, detection at 254
nm]. The retention times (min, % CH3CN/2 mM CuSO4) of the
standards were L-Pro (13.0, 5%), D-Pro (21.7, 5%), N-Me-L-allo-
Ile (30.4, 5%), N-Me-L-Ile (32.3, 5%), N-Me-D-Ile (41.0, 5%),
N-Me-D-allo-Ile (41.1, 5%), N-Me-L-Tyr (14.1, 15%), N-Me-D-
Tyr (16.2, 15%). The hydrolyzate contained peaks for L-Pro
(13.0), N-Me-L-Ile (32.3), and N-Me-L-Tyr (14.1).
Syn th esis of r,â-Dih yd r oxy-â-m eth ylp en ta n oic Acid
(Dh m p 6,7). A 3:1 mixture of the unsaturated ethyl ester15
(100 mg) was heated to 60 °C for 12 h in 7 mL of pyridine and
11 mL of NaOCl.16 The mixture was thrice partioned between
EtOAc and H2O, the organic layers were combined and dried
over MgSO4, and the solvent was removed in vacuo. This
mixture was then stirred with 300 mg of Ba(OH)2 in 0.5 mL
of methanol at room temperature overnight before the addition
of 1% H2SO4 until the solution was at pH 3. The cloudy solution
was allowed to stir overnight, before pelleting the BaSO4 by
centrifugation. The supernatant was evaporated under N2 to
In summary, further investigation into the chemical
composition of a particular Lyngbya sp. has expanded
the lyngbyapeptin and lyngbyabellin structural classes.
Lyngbyabellin D (3), the largest member of this family,
contains a rare γ-amino-â-hydroxy acid. The presence of a
methyl ester in 3 and the derivatization of C-25 with this
γ-amino-â-hydroxy acid further clouds the issue as to
whether dolabellin is a degradation product, as suggested
by the lability of a related cyclic analogue to preferential
methanolysis of a C-1 to C-25 ester linkage.2a
Evidently, this organism is able to produce concurrently
both cyclic and acyclic analogues of these compounds with
a variety of stereochemical configurations,2a,8,10,11 a tactic
that, if these metabolites are antifeedants, may provide an
evolutionary advantage by delaying the development of
detoxification mechanisms by predators.14
yield a mixture of all four diastereomers, in
a ratio of
approximately 3:1:1:3 as determined by chiral HPLC (vide
infra).
Asym m etr ic Syn th esis of r,â-Dih yd r oxy-â-m eth ylp en -
ta n oic Acid s (en t-7). A round-bottom flask with 700 mg of
AD mix-R was stirred at room temperature with 10 mL of a
1:1 mixture of t-BuOH and water until the organic layer was
yellow.17 To this was added 50 mg of methanesulfonamide and
the mixture cooled to 0 °C before the addition of 50 mg of 4.
After 18 h at 0 °C, 700 mg of sodium sulfite was added and
the solution allowed to warm to room temperature over 30 min.
This was then partioned between EtOAc and water, the
organic layer dried over MgSO4, and the solvent removed to
yield the pure dihydroxy ester. Subsequent saponification with
Ba(OH)2 and acid workup followed by centrifugation provided
the enantiomerically pure (2R,3S)-7 from the supernatant.
Dihydroxylation with AD mix-â produced the corresponding
enantiomer by the same procedure.
Exp er im en ta l Section
Gen er a l Exp er im en ta l P r oced u r es. The optical rotations
were measured on a J asco-DIP-700 polarimeter at the sodium
D line (589 nm). The UV spectra were determined on a
Hewlett-Packard 8453 spectrophotometer, and the IR spectra
were recorded on a Perkin-Elmer 1600 FTIR instrument as a
film on a NaCl disk. HRFAB-MS data were recorded in the
positive mode on a VG ZAB2SE spectrometer, and high-
resolution MALDI-MS data were recorded on a DE-STR mass
spectrometer. The NMR spectra were recorded in CDCl3 on a
Varian Unity INOVA 500 operating at 500 and 125 MHz using
the residual solvent signal as the internal reference. NMR
analyses of the synthetic products were carried out at 300 and
75 MHz using a Varian spectrometer. HPLC separations were
performed on a Beckman 110B apparatus coupled to an
Applied Biosystems 759A absorbance detector. All synthetic
reagents and amino acids were purchased from Aldrich.
(2R,3S)-2,3-Dih ydr oxy-3-m eth ylpen tan oic acid [(2R,3S)-
7]: [R]D24 -8° (c 1.23, H2O, lit. [R]D20 -16, c 1.23 in H2O);18 1
H
NMR (D2O) δ (multiplicity, integration; J in Hz) 0.70 (t, 3H;
7.5), 0.99 (s, 3H), 1.35 (dq, 1H; -13.8, 7.5), 1.45 (dq, 1H; -13.8,
7.5), 3.87 (s, 1H).18
(2S,3R)-2,3-Dih ydr oxy-3-m eth ylpen tan oic acid [(2S,3R)-
7]: [R]D +7° (c 1.23, H2O); 1H NMR (D2O) δ (multiplicity,
24
integration; J in Hz) 0.70 (t, 3H; 7.5), 0.99 (s, 3H), 1.35 (dq,
1H; -13.8, 7.5), 1.45 (dq, 1H; -13.8, 7.5), 3.87 (s, 1H).
Absolu te Ster eoch em istr y of Lyn gbya bellin D (3). A
solution of 100 µg of 3 was ozonized and saponified as
previously described.10 The resulting mixture was analyzed by
chiral HPLC [column CHIRALPAK MA(+), (4.6 × 50 mm),
0.8 mL/min, detection at 254 nm]. The retention times (min)
with 5% CH3CN/2 mM CuSO4 of the R,â-dihydroxy-â-methyl-
pentanoic acid standards prepared by the diastereoselective
route were (2R,3R)-Dhmp (29.2), (2R,3S)-Dhmp (32.1), (2S,3R)-
Biologica l Ma ter ia l. Several collections of Lyngbya sp.
VP417, from Finger’s Reef, Apra Harbor, Guam, were carried
out from February to April 2002 and combined for a total
weight of 300 g. A voucher is maintained in formalin at the
UOG.
Extr a ction a n d Isola tion of VP 417. The cyanobacterium
was initially extracted and separated as previously described
except the n-BuOH/H2O partition was omitted.4 The 5%
i-PrOH fraction contained lyngbyapeptin A (2), the 6% apra-