Volume 16, Number 2, 2002
AChE: MOBILITY OF CYSTEINE LOOP
69
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the behavior of decyl-Phy may be due to the unusual
steric effect of the long alkyl chain. The refined and su-
perimposed structures ACh (2) and decyl-Phy (7) reveal
aconformationaldistortionofthecysteineloop(Cys67–
Cys94) (Figure 5). From a structural point of view, other
studies on AChE complexes with reversible inhibitors
have shown very similar results [14].
The mobility of Trp84 and the dynamic behavior
of the cysteine loop (Cys67–Cys94) bearing Trp84 has
been a field of study that has provided very conflict-
ing results [15,16]. In particular, molecular dynamics
[15] suggests the existence of a molecular device (the
shutter-like back door) that opens to admit or remove
molecules, although site-directed mutagenesis studies
failed to provide experimental support for the back
door model [17]. In the present study, the adjustment
of the loop was observed for the longer N-carbamyl
chains (7). However, at the same time, the steric effects
seemed to interfere with the validity of the present ap-
proach: when bulky inhibitors were squeezed into the
binding pocket, the modeling showed that the cysteine
loop moved away (Figure 5).
4. Ordentlinch A, Barak D, Kronman C, Ariel N, Segall Y,
Velan B, Shafferman A. Contribution of aromatic moieties
of tyrosine 133 and of the anionic subsite tryptophan 86
to catalytic efficiency and allosteric modulation of acetyl-
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S, Russo L, Ives J, Liston D. Syntheses, resolu-
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acetyl-cholinesterase inhibitors: 8-Carbaphysostigmine
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In conclusion, the authors hope that this procedure,
and future studies based on steric effects, might help in
discoveringsomefeaturesofthetrafficofproductsfrom
the active site of AChE. This traffic might be governed
by the mobility of the cysteine loop and this dynamic
behavior may be part of a more general mechanism of
AChE catalysis.
12. Harel M, Quinn DM, Nair HK, Silman I, Sussman JL.
The X-ray structure of a transition state analog complex
reveals the molecular origins of the catalytic power and
substrate specificity of acetylcholinesterase. J Am Chem
Soc 1996;118:2340–2346.
13. March J. The hammond postulate. In Advanced Organic
Chemistry. London: McGraw-Hill; 1977. pp. 194–195.
14. Pomponi M, Marta M, Sacchi S, Colella A, Patamia M,
Gatta F, Capone F, Oliverio A, Pavone F. Studies on a new
series of THA analogs: Effects of the aromatic residues
that line the gorge of AChE. FEBS Lett 1997;409(2):155–
160.
ACKNOWLEDGMENTS
The authors thank Professor Arnold Brossi and
Prof. Nigel H. Greig (NIH, Bethesda), and Dr. Yuhpyng
L. Chen(Pfizer, Groton, CT)forthekindgiftofphysove-
nine and 8-carbaphysostigmine, respectively.
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