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D. Passarella et al. / European Journal of Medicinal Chemistry 45 (2010) 219–226
4.9. 2,7-Diaminooctanediamide N-(N-deacetylthiocolchicinyl) 15
vacuo and the residue purified by column chromatography (CH2Cl2/
MeOH 15/1) to afford the product 18 as a white amorphous solid in
Condensation of deacetylthiocolchicine and (2S,7S)-2,7-bis(tert-
butoxycarbonylamino)-octanedioic acid 9 according to Method A
afforded the corresponding Boc-protected dimer (130 mg;
0.12 mmol). The crude product was dissolved in dioxane (5 mL) and
treated with a solution of HCl in dioxane (saturated, 5 mL) at
ꢂ10 ꢁC. The solution was then stirred at r.t. for 1 h. Removal of the
solvent in vacuo gave a yellow–orange amorphous solid that was
redissolved in CH2Cl2 (10 mL) and was washed with a saturated
solution of NaHCO3. The organic phase was dried with sodium
sulfate and the solvent removed in vacuo to afford a yellow solid
that was purified by column chromatography (CH2Cl2/MeOH 5/1)
21% yield. Rf: 0.17 (CH2Cl2/MeOH 15/1). [
a
]D: -1.3 (CHCl3, c ¼ 0.25).
1H NMR (CDCl3, 400 MHz, detected signals) 6.80 (2H, s), 6.60 (2H,
s), 6.45 (4H, s), 6.05 (4H, s), 6.03–5.98 (m, 2H), 4.75–4.65 (m, 2H)
4.63 (s, 2H), 4.42–4.38 (m, 2H), 4.22–4.19 (m, 2H) 3.70 (s, 12H),
3.35–3.15 (m, 2H), 2.90–2.80 (m, 4H); 13C NMR (CDCl3, 100 MHz)
detected signals
d 174.3, 172.3, 154.1(2C), 149.6, 148.5, 139.1, 135.5,
133.0, 128.0, 110.5, 109.5(2C), 108.0, 102.4, 76.0, 72.0, 61.5, 57.0, 46.1,
44.0, 39.3, 35.7; Anal. Calcd. for C50H52N2O18S2: C, 58.13; H, 5.07; N,
2.71; found: C, 58.15; H, 5.09; N, 2.68. Data for the Boc-protected
dimer: Rf: 0.45 (CH2Cl2/AcOEt 4/1);; [
a
]D: – 4.79 (CHCl3, c ¼ 1). 1H
NMR (CDCl3, 400 MHz, detected signals) 6.80 (s, 2H), 6.60 (s, 2H),
6.40 (s, 4H), 6.00 (s, 4H), 5.92–5.89 (m, 2H), 4.71 (s, 2H) 4.63 (s, 2H),
4.42–4.39 (m, 2H), 4.21–4.18 (m, 2H), 3.80 (s, 6H), 3.75 (s, 6H), 3.70
(s, 6H), 3.22–3.18 (m, 4H), 2.82–2.79 (m, 4H), 1.50 (s, 18H); 13C NMR
to give 15 as a yellow amorphous solid (111 mg; 99% yield). [a]D: –
3.2 (CHCl3, c ¼ 0.2). 1H NMR (400 MHz, CDCl3): 8.78 (d, J ¼ 7.6, 2H),
7.63 (s, 2H), 7.34 (d, J ¼ 10.4, 2H), 7.10 (d, J ¼ 10.8, 2H), 6.53 (s, 2H),
4.68–4.80 (m, 2H), 3.94 (s, 6H), 3.90 (s, 6H), 3.68 (s, 6H), 2.46–2.55
(m, 2H), 2.42 (s, 6H), 2.20–2.39 (m, 8H), 1.74–2.15 (m, 6H). 13C NMR
(CDCl3, 100 MHz) detected signals
d 174.3, 172.3, 154.1(2C), 149.6,
148.8, 139.1, 135.5, 133.0, 128.0, 110.5, 109.5(2C), 108.0, 102.4,
78.0(2C), 76.0, 72.0, 61.5, 57.0, 46.1, 44.0, 39.3, 35.7, 30.6, 29.1. Anal.
Calcd. for C60H68N2O22S2: C, 58.43; H, 5.56; N, 2.27; found: 58.45; H,
5.59; N, 2.30.
(100 MHz, CDCl3) detected signals
d 182.1, 173.7, 158.3, 153.7, 152.8,
151.1, 141.6, 139.1, 134.9, 134.6, 129.1, 127.0, 125.6, 107.5, 61.7, 61.4,
56.1, 54.0, 52.3, 36.3, 33.7, 30.1, 24.2, 15.1. ESI positive MS: Anal.
Calcd. for C48H58N4O10S2Na: 937.3487; found: 937.3465. Data for
the Boc-protected dimer: 1H NMR (400 MHz, CDCl3): 8.60 (d,
J ¼ 7.6, 2H), 7.85 (s, 2H), 7.32 (d, J ¼ 10.4, 2H), 7.08 (d, J ¼ 10.4, 2H),
6.52 (s, 2H), 5.39 (d, J ¼ 7.2, 2H), 4.79 (dt, J ¼ 10.8, 7.4 Hz, 2H), 4.48
(dd, J ¼ 6.4, 4.8 Hz, 2H), 3.94 (s, 6H), 3.89 (s, 6H), 3.69 (s, 6H), 2.46–
2.54 (m, 2H), 2.41 (s, 6H), 2.14–2.40 (m, 8H), 1.86–2.07 (m, 6H), 1.37
4.13. Dipodophyllotoxin-4-yl adipate 19
Method A: podophyllotoxin 2 and adipic acid 7. Column chro-
matography (CH2Cl2/AcOEt 50/1) afforded compound 19 as a white
amorphous solid in 44% yield; [
a
]D: – 0.7 (CHCl3, c ¼ 0.4). 1H NMR
(s, 18H).13C NMR (100 MHz, CDCl3) detected signals
d
181.9, 171.2,
(400 MHz, CDCl3): 6.74 (s, 2H), 6.53 (s, 2H), 6.38 (s, 4H), 5.95 (s, 4H),
5.86 (d, J ¼ 8.8, 2H), 4.59 (d, J ¼ 4.4, 2H), 4.33 (dd, J ¼ 9.2, 6.8 Hz,
2H), 4.13 (t, J ¼ 9.8, 2H), 3.78 (s, 6H), 3.74 (s,12H), 2.89–2.97 (m, 2H),
2.75–2.87 (m, 2H), 2.42–2.51 (m, 4H), 1.71–1.78 (m, 4H). 13C NMR
158.5, 155.3, 153.6, 152.7, 151.1, 141.6, 138.9, 134.7,129.7, 126.8, 125.8,
107.5, 79.0, 61.7, 61.3, 56.1, 53.4, 52.3, 36.2, 32.5, 30.2, 28.3, 23.6,
15.1. ESI positive MS: Anal. Calcd. for C58H74N4O14S2Na: 1137.4535;
found: 1137.4496.
(100 MHz, CDCl3) detected signals d 173.6, 173.5, 152.6, 148.1, 147.5,
137.1, 134.8, 132.4, 128.2, 109.7, 108.1, 106.9, 101.5, 73.7, 71.3, 60.7,
56.1, 45.5, 43.7, 38.6, 33.8, 24.2. ESI positive MS: Anal. Calcd. for
C50H50O18Na: 961.2889; found: 961.2864
4.10. Diadipamide N-(N-deacetylthiocolchicinyl) 16
Method A. Deacetylthiocolchicine and adipic acid 7. Column
chromatography (CH2Cl2/MeOH 40/1) afforded compound 16 as
4.14. Podophyllotox-4-yl 4-[N-(N-deacetylthiocolchicinyl)-4-
a yellow amorphous solid in 45% yield. [
a
]D: – 1.2 (CHCl3, c ¼ 0.3).
oxobutyl disulfanyl butanoate 20
1H NMR (300 MHz, CDCl3): 8.85 (d, J ¼ 6, 2H), 7.71 (s, 2H), 7.35 (d,
J ¼ 10, 2H), 7.12 (d, J ¼ 10, 2H), 6.57 (s, 2H), 4.66 (ddd, J ¼ 12, 6, 6,
2H), 3.92 (s, 6H), 3.90 (s, 6H), 3.65 (s, 6H), 2.60–2.65 (m, 2H), 2.45 (s,
6H), 1.70–2.40 (m, 14H).13C NMR (75 MHz, CDCl3) detected signals
A solution of 4,40-dithiodibutyric acid 6 (198 mg; 0.83 mmol),
DMAP (38 mg; 0.31 mmol), DCC (194 mg; 0.94 mmol) and deace-
tylthiocolchicine (234 mg; 0.63 mmol) was stirred at room
temperature for 2 h before being filtered through celite. The solvent
was removed in vacuo and the residue was dissolved in CH2Cl2 and
washed with a solution of ammonium hydroxide. The organic
phase was dried over sodium sulfate and the solvent was removed
in vacuo to give the corresponding crude monomer (265 mg, 65%
yield). The monomer (178 mg, 0.30 mmol), DMAP (26 mg,
0.21 mmol), DCC (123 mg, 0.60 mmol) and podophyllotoxin 2
(124 mg, 0.30 mmol) were dissolved in CH2Cl2 (10 mL). After 7 h
the solvent was removed in vacuo and the residue purified by
column chromatography (CH2Cl2/MeOH 5/1) to give 20 (253 mg,
86% yield) as a yellow amorphous solid. Rf: 0.59 (CH2Cl2/MeOH 30/1).
d
181.9, 173.1, 158.0, 153.7, 152.7, 151.0, 141.0, 139.2, 134.9, 134.7,
128.6, 127.0, 125.8, 107.4, 61.8, 61.4, 56.1, 53.0, 37.0, 35.1, 30.1, 25.8,
15.1; Anal. Calcd. for C46H52N2O10S2: C, 64.47; H, 6.12; N, 3.27.
Found: C, 64.51; H, 6.13; N, 3.29.
4.11. Dipodophyllotoxin-4-yl 2,20-dithiobisacetate 17
[19] Method A. Podophyllotoxin 2 and dithiodiglycolic acid 4.
Column chromatography (CH2Cl2/MeOH 20/1) afforded compound
17 as a white amorphous solid in 50% yield. Rf: 0.53 (CH2Cl2/MeOH
20/1); [
a
]D: – 0.53 (CHCl3, c ¼ 1). Anal. Calcd. for C48H46O18S2: C,
59.13; H, 4.76. Found: C, 59.16; H, 4.78.
[a
]D: – 0.9 (CHCl3, c ¼ 0.5). 1H NMR (CDCl3, 300 MHz, detected
signals): 8.52 (s, 1H, Thio), 7.25 (d, J ¼ 9.4, 1H, Thio), 7.17 (s, 1H,
Thio), 7.03 (d, J ¼ 9.4, 1H, Thio), 6.75 (s, 1H, Pod), 6.53 (s, 1H, Thio),
6.51 (s, 2H, Pod), 6.38 (s, 2H, Pod), 5.98 (d, J ¼ 7.5, 2H, Pod), 5.88 (d,
J ¼ 9.4, 1H, Pod), 4.68–4.56 (2H, m, Thio þ Pod), 4.36 (dd, J ¼ 6.9, 9.7,
1H, Pod), 4.21 (dd, J ¼ 3.2, 6.5, 1H, Pod), 3.91 (s, 3H, Thio), 3.89 (s,
3H, Thio), 3.81 (s, 3H, Pod), 3.75 (s, 6H, Pod), 3.63 (s, 3H, Thio), 2.97–
2.94 (m, 1H, Pod), 2.85–2.75 (m, 1H, Pod), 2.76–2.49 (m, 2H, Thio),
2.42 (s, 3H, Thio), 2.41–1.86 (m, 14H, Thioþ linker). 13C NMR
4.12. Dipodophyllotoxin-4-yl 3,30-bisthio-2-amino propanoate 18
Condensation of podophyllotoxin
2 and (Boc–Cys–OH)2 8
according Method B afforded the corresponding Boc-protected
dimer (149.3 mg; 0.12 mmol). The crude product was dissolved in
CH2Cl2 (10 mL), TFA (2.22 g; 1.5 mL; 19.4 mmol) was added at
ꢂ15 ꢁC and the reaction mixture was stirred for 48 h. The organic
phase was washed with a saturated solution of NaHCO3 at ꢂ20 ꢁC.
The temperature was allowed to rise to r.t. over 1 h. The organic
phase was dried over sodium sulfate, the solvent was removed in
(100 MHz, CDCl3) detected signals
d 182.6 (1C, Thio), 173.5 (1C,
Podo), 170.0 (1C, Linker), 168.5 (1C, Linker), 158.3 (1C, Thio), 153.5
(1C, Thio), 152.1 (2C, Podo), 151.9 (1C, Thio), 151.0 (1C, Thio), 148.4