4610
J. A. Kaizerman et al. / Bioorg. Med. Chem. Lett. 20 (2010) 4607–4610
3. Lum, L.; Beachy, P. A. Science 2004, 304, 1755.
Table 3
4. Epstein, E. H. Nat. Rev. Cancer 2008, 8, 743.
Rat and mouse pharmacokinetics for selected phthalazine and pyridopyridazine-
based smoothened inhibitorsa
5. Berman, D. M.; Karhadkar, S. S.; Hallahan, A. R.; Pritchard, J. I.; Eberhart, C. G.;
Watkins, D. N.; Chen, J. K.; Cooper, M. K.; Taipale, J.; Olson, J. M.; Beachy, P. A.
Science 2002, 297, 1559.
Compd
Species
CL (iv, L/h/kg)
Vdss (L/kg)
AUCpo
(lg h/L)
%F
6. (a) Austin, R. J.; Kaizerman, J.; Lucas, B.; McMinn, D. L.; Powers, J. PCT Int. Appl.
WO 2009/002469 A1, 2009.; (b) Kaizerman, J.; Lucas, B.; McMinn, D. L.;
Zamboni, R. PCT Int. Appl. WO 2009/035568 A1, 2009.
1
2
Rat
Rat
Rat
Rat
Rat
Rat
Mouse
0.41
0.28
5.7
5.1
1.7
1.8
1.4
1.4
3.5
2
1200
1800
BQL
39
15
nd
22
35
73
46
12
13
26
27
27
7. (a) Miller-Moslin, K.; Peukert, S.; Jain, R. K.; McEwan, M. A.; Karki, R.; Llamas, L.;
Yusuff, N.; He, F.; Li, Y.; Sun, Y.; Dai, M.; Perez, L.; Michael, W.; Sheng, T.; Lei, H.;
Zhang, R.; Williams, J.; Bourret, A.; Ramamurthy, A.; Yuan, J.; Guo, R.;
Matsumoto, M.; Vattay, A.; Maniara, W.; Amaral, A.; Dorsch, M.; Kelleher, J. F.
J. Med. Chem. 2009, 52, 3954; Review of recent efforts in the field of Hh
signaling regulation: (b) Mahindroo, N.; Punchihewa, C.; Fujii, N. J. Med. Chem.
2009, 52, 3829; (c) Peukert, S.; Jain, R. K.; Geisser, A.; Sun, Y.; Zhang, R.; Bourret,
A.; Carlson, A.; DaSilva, J.; Ramamurthy, A.; Kelleher, J. F. Bioorg. Med. Chem.
Lett. 2009, 19, 328; (d) Tremblay, M. R.; Nevalainen, M.; Nair, S. J.; Porter, J. R.;
Castro, A. C.; Behnke, M. L.; Yu, L.-C.; Hagel, M.; White, K.; Faia, K.; Grenier, L.;
Campbell, M. J.; Cushing, J.; Woodward, C. N.; Hoyt, J.; Foley, M. A.; Read, M. A.;
Sydor, J.; Tong, J. K.; Palombella, V. J.; McGovern, K.; Adams, J. J. Med. Chem.
2008, 51, 6646; (e) Feldmann, G.; Fendrich, V.; McGovern, K.; Bedja, D.; Bisht,
S.; Alvarez, H.; Koorstra, J.-B. M.; Habbe, N.; Karikari, C.; Mullendore, M.;
Gabrielson, K. L.; Sharma, R. Mol. Cancer Ther. 2008, 7, 2725; (f) Brunton, S. A.;
Stibbard, J. H. A.; Rubin, L. L.; Kruse, L. I.; Guichert, O. M.; Boyd, E. A.; Price, S. J.
Med. Chem. 2008, 51, 1108; (g) Remsberg, J. R.; Lou, H.; Tarasov, S. G.; Dean, M.;
Tarasova, N. I. J. Med. Chem. 2007, 50, 4534; (h) Rudin, C. M.; Hann, C. L.; Laterra,
J.; Yauch, R. L.; Callahan, C. A.; Fu, L.; Holcomb, T.; Stinson, J.; Gould, S. E.;
Coleman, B.; LoRusso, P. M.; Von Hoff, D. D.; de Sauvage, M. J.; Low, J. A. NEJM
2009, 361, 1173.
1.1
460
0.45
0.46
0.64
1600
3300
3500
a
Dosed iv 0.5 mg/kg, po 2 mg/kg.
200
1600
Ave Gli/RGS
180
1400
1200
1000
800
600
400
200
0
Mean plasma concentration of 27(ug/L)
160
140
120
100
80
60
8. Lucas, B. S.; Aaron, W.; An, S.; Austin, R. J.; Brown, M.; Chan, H.; Chong, A.;
Hungate, R.; Huang, T.; Jiang, B.; Johnson, M. G.; Kaizerman, J. A.; Lee, G.;
McMinn, D. L.; Orf, J.; Powers, J. P.; Rong, M.; Toteva, M. M.; Uyeda, C.;
Wickramasinghe, D.; Xu, G.; Ye, Q.; Zhong, W. Bioorg. Med. Chem. Lett. 2010, 20,
3618.
40
20
0
vehicle
1 mpk
5 mpk
50 mpk
9. Inhibitors of the Hh pathway featuring a piperazine-substituted phthalazines
have been described, Ref. 7a.
Figure 3. Reduction of Gli1 expression in skins of mice treated with 27. Four
animals per group, two samples per animal; 1 mg/kg, = 0.355; 5 mg/kg,
= 0.0011; 50 mg/kg, <0.0001 (Dunnet’s method).
10. Biological methods: IC50 assay for mouse Smo: mouse smoothened activity was
measured in vitro using a modified version of the method described.11d An
oligonucleotide cassette with five consensus Gli1 binding sites was ligated into
the luciferase reporter plasmid pGL4.16 (Promega, Madison, WI, USA). A stable
clone of NIH-3T3 cells stably transfected with the Gli1-binding-site plasmid
was used for the reporter assay. Compounds were incubated with cells for 15 h
in the presence of Optimem medium (Invitrogen, Carlsbad, CA, USA)
supplemented with 0.5% charcoal–dextran treated fetal bovine serum
(HyClone) and 10 mM myristoylated mouse Shh protein (Williams et al.,
1999). Luciferase activity was measured by addition of Bright-Glo (Promega)
and reading on a luminometer. Compounds were tested in quadruplicate using
a threefold dilution series.
q
q
q
not only was PXR activation suppressed, but potency in the human
biochemical assay was improved sixfold relative to 26. These
qualities were augmented by impressive in vivo pharmacokinetic
profiles in potential representative pharmacodynamic model spe-
cies (Table 3). Compound 27 provided superior oral exposure rela-
tive to 26 in rats and exhibited low clearance and good oral
bioavailability in the mouse. Finally, compounds 26 and 27, as rep-
resentatives of this class, showed excellent potency in the mouse,
our species of choice for pharmacodynamic efficacy assessment.
Our pharmacodynamic model relies upon the known overex-
pression of Hh target genes in the depilated skin of mice.10 The Hh
signaling pathway is activated during the growth stage of the hair
cycle resulting in up-regulation of target genes including Gli1. Skins
of mice were depilated and, after 5 days, were harvested 6 h post-
oral dosing with 27. Gli1 expression was measured against reference
genes. Figure 3 shows a dose dependent reduction of Gli1 expression
IC50 assay for human SMO: HEPM cells were used to measure human SMO
activity in vitro using a modified version of the method described by others [US
Patent 6,613,798]. In 96 well tissue culture plates, compounds were incubated
with HEPM cells in the presence of MEM media supplemented with 0.5%
charcoal–dextran treated fetal bovine serum (HyClone) and 50 mM
myristoylated mouse Shh protein (Williams et al. 1999). Twenty-four hours
after the addition of compound and Shh, GLI expression was measured using a
Quantigene assay (Affymetrix, Santa Clara, CA, USA).
Mouse skin pharmacodynamic model: Female NOD-Scid mice (Taconic, Hudson,
NY, USA) aged 5–8 weeks were shaved on one side of the hind flank. Four days
after shaving, mice were anesthetized and regrown hair was removed using
hair removal wax strips. After 5 days, mice were dosed orally with compounds
or vehicle. At specified time points after dosing, animals were sacrificed and
the waxed regions of skin were excised and stored in RNALater solution
(Ambion, Austin, TX, USA) at 4 °C. Skin samples were homogenized in Lysis
buffer (Ambion) using a Tomtec Autogizer (Hamden, CT, USA); RNA was
purified using an mirVana miRNA Isolation Kit (Ambion). RNA was converted
cDNA using reverse transcriptase prior to quantitative, real time PCR analysis
(Applied Biosystems, Foster City, CA, USA). Gli1 expression was normalized to
Rgs3 expression using the standard curve method.
was observed (approximate EC50 = 0.46
an improvement over the performance of our previously reported
compound 1 in this model (EC50 = 2.0
M).16,8
lM). This result constitutes
l
In conclusion, pyridopyridazines described in this work consti-
tute a novel class of SMO inhibitors capable of suppressing PXR
transactivation, a potential liability seen for our previously reported
potent phthalazine-based inhibitors. Compounds 26 and 27 of the 4-
((2R)-2-methyl-4-(phenylcarbonyl)-1-piperazin-yl)-1-phenylpyri-
do[3,4-d]pyridazine regio-isomeric sub-class highlight our ability to
redress PXR liabilities while maintaining potency and metabolic sta-
bility in vitro. Finally, compound 27 proved efficacious at disrupting
Hh signaling in an in vivo pharmacodynamic model. These results
merit our continued investigation of this structural class.
11. (a) Paladini, S.; Qian, X.; Rubin J. Invest. Dermatol. 2005, 125, 638; (b) Williams,
K. P.; Rayhorn, P.; Chi-Rosso, G.; Garber, E. A.; Strauch, K. L.; Horan, G. S. B.;
Reilly, J. O.; Baker, D. P.; Taylor, F. R.; Koteliansky, V.; Pepinsky, R. B. J. Cell Sci.
1999, 112, 4405; (c) U.S. Patent 6,613,798.; (d) Chen, J. K.; Taipale, J.; Young, K.
E.; Maiti, T.; Beachy, P. A. PNAS 2002, 99, 14071.
12. Sinz, M. W. Ann. Rep. Med. Chem. 2008, 43, 405.
13. The purity of final compounds was determined by HPLC. The final structures
are consistent with their 1H NMR and LCMS spectral data. The enantiomeric
purity was determined by HPLC and found to be >98% ee.
14. PXR activation relative to percent of control (rifampin) was determined using
HepG2 cells transfected with a luciferase reporter construct driven by human
PXR cDNA with luciferase activity determined by chemiluminescence.
15. Klapars, A.; Antilla, J. C.; Huang, X.; Buchwald, S. L. J. Am. Chem. Soc. 2001, 123,
7727.
References and notes
16. Fraction unbound 1 in mouse plasma = 0.06; fraction unbound 27 in mouse
plasma = 0.035 (ultracentrifugation).
1. Ingham, P. W.; McMahon, A. P. Genes Dev. 2001, 15, 3059.
2. Rubin, L. L.; de Sauvage, F. J. Nat. Rev. Drug Discov. 2006, 5, 1026.