K. Worm-Leonhard, M. Meldal
FULL PAPER
in vacuo, and the crude product was purified by preparative RP-
HPLC to yield the title compound as a slightly yellow oil. Yield
110.8 mg (95%). H NMR (800 MHz, [D6]DMSO): δ = 9.17 (s, 2
H), 7.98 (t, J = 7.7 Hz, 1 H), 7.73 (s, 2 H), 7.66 (s, 2 H), 7.49 (d,
J = 7.7 Hz, 2 H), 5.61 (s, 4 H), 5.17 (s, 4 H) ppm. 13C NMR
(201 MHz, [D6]DMSO): δ = 168.2, 153.5, 138.8, 137.7, 123.7,
122.8, 122.0, 52.5, 49.8 ppm. HRMS (ESI): calcd. for C17H19N5O4
[M – 2 CF3COO–]2+ 178.5713; found 178.5710.
treatment with 95% TFA (aqueous). After purification by prepara-
tive RP-HPLC (purity Ͼ 95%), the title compound was obtained
as a white powder. Yield 24.1 mg (41%) obtained from 300 mg of
1
1
PEGA800 resin (loading: 0.25 mmol/g). H NMR (250 MHz, [D6]-
DMSO): δ = 9.15 (s, 1 H), 9.09 (s, 1 H), 8.87 (d, J = 8.1 Hz, 1 H),
8.12 (d, J = 8.9 Hz, 1 H), 7.96 (t, J = 7.7 Hz, 1 H), 7.66–7.58 (m,
4 H), 7.48 (t, J = 7.0 Hz, 2 H), 7.38 (br. s, 1 H), 7.28–7.20 (m, 5
H), 7.06 (br. s, 1 H), 5.58 (s, 2 H), 5.51 (s, 2 H), 5.04 (d, J = 5.7 Hz,
2 H), 4.71 (dt, J = 4.5, 8.9 Hz, 1 H), 4.13 (dd, J = 6.7, 8.8 Hz, 1
H), 3.84 (s, 3 H), 3.07 (dd, J = 4.4, 13.8 Hz, 1 H), 2.82 (dd, J =
9.4, 13.8 Hz, 1 H), 1.96 (qd, J = 6.7 Hz, 1 H), 0.85 (d, J = 6.5 Hz,
3 H), 0.82 (d, J = 6.5 Hz, 3 H) ppm. 13C NMR (63 MHz, [D6]-
DMSO): δ = 172.6, 170.3, 164.6, 153.5, 153.4, 138.7, 138.0, 137.3,
137.0, 129.2 (2 C), 128.0 (2 C), 126.2, 123.4 (2 C), 123.0, 122.6,
122.0, 121.9, 57.5, 54.2, 52.4 (2 C), 50.5, 37.7, 35.7, 30.3, 19.2, 17.9
ppm. HRMS (ESI): calcd. for C30H38N8O3 [M – 2 CF3COO–]2+
279.1528; found 279.1528.
1-(Carboxymethyl)-3-({6-[(1-methyl-1H-imidazol-3-ium-3-yl)meth-
yl]pyridin-2-yl}methyl)-1H-imidazol-3-ium Bis(trifluoroacetate) (4b):
The tert-butyl ester 3b (119.0 mg, 0.2 mmol) was dissolved in
CH2Cl2/TFA (1:1) and stirred for 4 h, after which time the solvent
and TFA were removed in vacuo, and the crude product was puri-
fied by preparative RP-HPLC to yield the title compound as a
slightly yellow oil. Yield 102.5 mg (95%). 1H NMR (250 MHz, [D6]-
DMSO): δ = 9.20 (s, 1 H), 9.10 (s, 1 H), 7.98 (t, J = 7.7 Hz, 1 H),
7.77–7.65 (m, 4 H), 7.48 (d, J = 7.7 Hz, 2 H), 5.62 (s, 2 H), 5.52
(s, 2 H), 5.19 (s, 2 H), 3.88 (s, 3 H) ppm. 13C NMR (63 MHz, [D6]-
DMSO): δ = 168.0, 153.5, 153.4, 138.7, 137.8, 137.0, 123.5, 123.4,
123.0, 122.8, 122.0, 121.9, 52.5, 52.4, 49.8, 35.7 ppm. HRMS (ESI):
calcd. for C16H19N5O2 [M – 2 CF3COO–]2+ 156.5764; found
156.5750.
Pd Complex 7: Resin-bound 5 was swelled in MeCN and treated
with BEMP (2.0 equiv.) for 15 min under an argon atmosphere fol-
lowed by the addition of PdCl2COD (1.5 equiv.). The reaction was
left for 5 h and then washed with MeCN (5ϫ) and CH2Cl2 (5ϫ).
The final complex was released from the resin by a 2 h treatment
with 95% TFA (aqueous). After purification by preparative RP-
HPLC (purity Ͼ 95%), the title compound was obtained as a white
powder. Yield 14.9 mg (35%) obtained from 250 mg of PEGA800
N-{[3-(Pyridin-2-ylmethyl)-1H-imidazol-3-ium-1-yl]acetyl}-
L-phen-
ylalanyl- -valine Trifluoroacetate (5): Attachment of the Fmoc-
L
1
Rink-amide linker followed the standard amino acid coupling pro-
cedure (Fmoc-Aa-OH, TBTU, NEM, DMF). The Fmoc-protecting
group was removed under standard conditions by two successive
additions of 20% piperidine in DMF. The amino acids Fmoc-Val-
OH and Fmoc-Phe-OH were coupled to the resin with the above-
mentioned standard coupling procedure with the standard Fmoc-
deprotection steps in between. Imidazolium salt 2a was then at-
tached to the resin with the standard amino acid coupling pro-
cedure, and the final product was released from the resin by a 2 h
treatment with 95% TFA (aqueous). After purification by prepara-
tive RP-HPLC (purity Ͼ 95%), the title compound was obtained
as a white powder. Yield 22.5 mg (45%) obtained from 350 mg of
resin (loading: 0.25 mmol/g). H NMR (800 MHz, [D6]DMSO): δ
= 10.02 (d, J = 8.3 Hz, 1 H), 8.56 (d, J = 5.6 Hz, 1 H), 8.20 (dt, J
= 1.4, 7.8 Hz, 1 H), 7.78 (d, J = 7.8 Hz, 1 H), 7.71 (s, 1 H), 7.63
(t, J = 6.5 Hz, 1 H), 7.58 (d, J = 1.9 Hz, 1 H), 7.56 (d, J = 1.9 Hz,
1 H), 7.38, (s, 1 H), 7.10–7.09 (m, 2 H), 6.99–6.98 (m, 1 H), 5.66
(d, J = 16.3 Hz, 1 H), 5.45 (dd, J = 4.0, 5.2 Hz, 1 H), 5.05 (d, J =
16.2 Hz, 1 H), 4.79 (d, J = 16.9 Hz, 1 H), 4.68 (d, J = 16.9 Hz, 1
H), 4.23 (t, J = 7.8 Hz, 1 H), 3.12 (dd, J = 5.5, 13.5 Hz, 1 H), 3.02
(dd, J = 3.7, 13.5 Hz, 1 H), 2.11 (qd, J = 6.8, 13.8 Hz, 1 H), 0.98
(d, J = 6.8 Hz, 3 H), 0.96 (d, J = 6.8 Hz, 3 H) ppm. 13C NMR
(151 MHz, [D6]DMSO): δ = 182.2, 171.7, 164.7, 154.0, 151.6,
147.4, 141.6, 141.2, 138.4, 138.0, 136.5, 130.9, 127.9, 126.7, 126.2,
126.1, 122.9, 122.1, 66.4, 59.7, 53.4, 40.1, 30.5, 19.7, 18.6 ppm.
1
PEGA800 resin (loading: 0.25 mmol/g). H NMR (800 MHz, [D6]-
HRMS (ESI): calcd. for C25H29N6O3Pd [M
567.1336; found 567.1337.
–
CF3COO–]+
DMSO): δ = 9.20 (s, 1 H), 8.74 (d, J = 8.2 Hz, 1 H), 8.10 (d, J =
9.0 Hz, 1 H), 7.88 (dt, J = 1.6, 7.6 Hz, 1 H), 7.75 (t, J = 1.5 Hz, 1
H), 7.56 (t, J = 1.5 Hz, 1 H), 7.45 (d, J = 7.8 Hz, 1 H), 7.40 (dd,
J = 5.2, 7.2 Hz, 1 H), 7.35 (s, 1 H), 7.25–7.24 (m, 5 H), 7.19–7.17
(m, 1 H), 7.08 (s, 1 H), 5.58 (s, 2 H), 5.02 (d, J = 16.5 Hz, 1 H),
4.96 (d, J = 16.5 Hz, 1 H), 4.69 (dt, J = 4.6, 8.8 Hz, 1 H), 4.12 (dd,
J = 6.7, 8.9 Hz, 1 H), 3.04 (dd, J = 4.5, 13.9 Hz, 1 H), 2.79 (dd, J
= 9.4, 13.9 Hz, 1 H), 1.95 (qd, J = 6.8, 13.6 Hz, 1 H), 0.85 (d, J =
6.8 Hz, 3 H), 0.82 (d, J = 6.8 Hz, 3 H) ppm. 13C NMR (201 MHz,
[D6]DMSO): δ = 173.2, 171.0, 165.0, 154.1, 150.1, 138.4, 138.1,
137.9, 129.8, 129.7, 128.6, 128.5, 126.9, 124.3, 124.2, 123.1, 123.0,
58.1, 54.6, 53.6, 51.1, 38.4, 31.0, 19.8, 18.6 ppm. HRMS (ESI):
calcd. for C25H31N6O3 [M – CF3COO–]+ 463.2452; found 463.2458.
Pd Complex 8: Resin-bound 6 was swelled in MeCN and treated
with BEMP (3.0 equiv.) for 15 min under an argon atmosphere,
followed by the addition of PdCl2COD (1.5 equiv.). The reaction
was left for 5 h and then washed with MeCN (5ϫ) and CH2Cl2
(5ϫ). The final complex was released from the resin by 2 h treat-
ment with 95% TFA (aqueous). After purification by preparative
RP-HPLC (purity Ͼ 95%), the title compound was obtained as a
white powder. Yield 10.5 mg (26%) obtained from 200 mg of
1
PEGA800 resin (loading: 0.25 mmol/g). H NMR (600 MHz, [D6]-
DMSO): δ = 10.08 (d, J = 7.2 Hz, 1 H), 9.18 (s, 1 H), 9.04 (s, 1
H), 8.01 (t, J = 7.6 Hz, 1 H), 7.73–7.72 (m, 1 H), 7.67 (s, 1 H),
7.49–7.46 (2 H), 7.38 (s, 1 H), 7.15 (m, 2 H), 6.95–6.93 (m, 3 H),
6.82 (d, J = 6.9 Hz, 2 H), 5.55 (s, 2 H), 5.48 (s, 2 H), 4.78–4.68 (m,
3 H), 4.00 (t, J = 7.7 Hz, 1 H), 3.90 (s, 3 H), 3.01 (m, 1 H), 2.91
(dd, J = 4.7, 13.1 Hz, 1 H), 2.03 (qd, J = 7.3, 13.9 Hz, 1 H), 0.92
(d, J = 6.0 Hz, 3 H), 0.91 (d, J = 6.0 Hz, 3 H) ppm. 13C NMR
(151 MHz, [D6]DMSO): δ = 182.1, 182.0, 171.4, 171 ppm. 0, 164.5,
154.4, 153.8, 139.1, 137.2, 135.8, 130.5, 130.4, 127.6, 127.1, 126.6,
123.7, 123.2, 123.0, 122.3, 122.2, 64.8, 59.6, 54.7, 52.8, 52.5, 36.0,
29.7, 25.8, 19.1, 18.5 ppm. HRMS (ESI): calcd. for
C30H36ClN8O3Pd [M – CF3COO–]+ 697.1634; found 697.1644.
N-{[3-({6-[(1-Methyl-1H-imidazol-3-ium-3-yl)methyl]pyridin-2-
yl}methyl)-1H-imidazol-3-ium-1-yl]acetyl}-L-phenylalanylvaline Bis-
(trifluoroacetate) (6): Attachment of the Fmoc-Rink-amide linker
was performed following the standard amino acid coupling pro-
cedure (Fmoc-Aa-OH, TBTU, NEM, DMF). The Fmoc-protecting
group was removed under standard conditions by two successive
additions of 20% piperidine in DMF. The amino acids Fmoc-Val-
OH and Fmoc-Phe-OH were coupled to the resin with the above-
mentioned standard coupling procedure with the standard Fmoc-
deprotection steps in between. Imidazolium salt 4b was then at-
tached to the resin with the standard amino acid coupling pro-
cedure, and the final product was released from the resin by a 2 h
General Procedure for Sonogashira Cross-Coupling Reactions: To a
Nunc vial containing the solid-phase-immobilized palladium cata-
5250
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Eur. J. Org. Chem. 2008, 5244–5253