C.C. Paluti, E.S. Gawalt / Journal of Catalysis 275 (2010) 149–157
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2.3.2. Thiol synthesis
2.3.2.1. Bromine tail group thiol
chips were analyzed and then utilized in the immobilization of the
aza-bis(oxazoline) ligand.
2.3.2.1.1. Bromine tail group thiol ester (11-bromoundecyl-ethanethi-
oate). To a three-neck round-bottom flask wrapped with Al foil,
25 ml methanol, azo-bis isobutyronitrile (0.152 mmol, 25 mg), thi-
olacetic acid (8.60 mmol, 0.655 ml), and 11-bromo-1-undecene
(3.92 mmol, 0.915 ml) were added. The reaction mixture was stir-
red under UV light for 12 h.
2.3.2.1.2. Bromine tail group thiol (11-bromoundecane-1-thiol). 11-
Bromoundecyl-ethanethioate (2.92 mmol, 0.9 g) was added to a
round-bottom flask with 20 ml methanol, and then 2 ml of hydro-
chloric acid was added. The reaction mixture was refluxed over-
night. 1H NMR (400 MHz, CDCl3 RT) d 3.38 ppm (t, 2H, J = 7 Hz),
2.49 ppm (q, 2H, J = 7 Hz), 1.83 ppm, (q, 2H J = 7 Hz), 1.58 ppm (q,
2H, J = 7 Hz).
2.3.4. Mitsunobu reaction (ligand immobilization)
The ligand was immobilized to the SAM surface via a surface
Mitsunobu reaction as in the literature [17]. Mixed monolayer
chips were placed in a three-neck round-bottom flask. Aza-
bis(oxazoline) ligand (1a) and triphenylphosphine were added.
THF was added and then the reaction flask was placed in an oil
bath at 50 °C. Under N2, diethyl azodicarboxylate was added and
the reaction was hand-stirred [17] for 2 h. The samples were re-
moved from the reaction mixture and rinsed with dichlorometh-
ane to remove reagents loosely bound to the surface.
2.4. Surface characterization
2.3.2.2. Ester tail group thiol
2.4.1. Diffuse reflectance infrared Fourier transform (DRIFT)
2.3.2.2.1. Ester tail group thiol ester (methyl 10-(acetylthio)-undecan-
oate). To a three-neck round-bottom flask wrapped with Al foil,
25 ml methanol, azo-bis isobutyronitrile (0.152 mmol, 25 mg), thi-
olacetic acid (8.60 mmol, 0.655 ml), and 10-undecenoic acid
(4.61 mmol, 0.915 ml) were added. The reaction mixture was stir-
red under UV light for 12 h.
2.3.2.2.2. Ester tail group thiol (methyl 10-mercaptodecanoate).
Methyl 10-(acetylthio)-undecanoate (3.45 mmol, 0.9 g) was added
to a round-bottom flask with 20 ml methanol, followed by 2 ml of
hydrochloric acid. The reaction mixture was refluxed overnight.
(Yield 72%) 1H NMR (400 MHz, CDCl3 RT) d 3.67 ppm (s, 3H),
2.52 ppm (q, 2H, J = 8, 7 Hz), 2.31 ppm (t, 2H, J = 7 Hz), 1.73 ppm
(s, 1H), 1.62 ppm (m, 2H), 1.50 ppm (m, 2H) 1.32 ppm (m, 6H).
The chips were studied using diffuse reflectance infrared Fou-
rier transform spectroscopy (DRIFT) (Thermo Nicolet-NEXUS 470
FT-IR) to analyze the alkyl chain ordering of the molecules on the
surface. The spectra were recorded under nitrogen to eliminate
the background signals due to CO2 and H2O adsorption bands.
Unmodified gold substrates were used as the background spectra.
We collected 1024 scans for each sample with
resolution.
a
4 cmÀ1
2.4.2. AP MALDI-TOF MS
Atmospheric pressure matrix-assisted laser desorption/ioniza-
tion time-of-flight mass spectrometry (AP MALDI-TOF MS) was
used to analyze the monolayer and to determine whether the
aza-bis(oxazoline) ligands were attached to the monolayer surface
before and after use in the cyclopropanation reaction. A high-res-
olution AP MALDI-TOF MS (Agilent Tech.) with pulsed dynamic
focusing was used. MS analysis of the ions were detected in the
positive mode using a 337 nm N2 laser, pulse width of 20 ns, a
capillary voltage of 3500 V, fragmentor voltage of 260 V, skimmer
voltage of 40 V, and drying temperature of 325 °C. External cali-
bration was done using an ES-TOF tuning mix of 10 masses for
the range of 100–2300 m/z. Three to five areas of each sample
were characterized using the MALDI-TOF. The spectra were col-
lected by uniformly moving the laser in a circular pattern across
the sample for 1 min. The spectra were reproducible within a sin-
2.3.2.3. Nitrile tail group thiol
2.3.2.3.1. Addition of protecting group. 11-Mercapto-1-undecanol
(8.978 mmol, 1.833 g), trityl chloride (6.27 mmol, 1.75 g), and
40 ml THF were added to a three-neck round-bottom flask. The
reaction mixture was stirred under nitrogen for 14 h. Purification
of crude product was performed by filtration of crude product with
2/1 ethyl acetate/hexane. The protected thiol was then used in the
next step of the synthesis.
2.3.2.3.2. Addition of nitrile group to protected thiol. To a round-bot-
tom flask wrapped with Al foil, 10 mg NaOH, protected thiol
(0.828 mmol, 360 mg), and 15 ml acetonitrile were added and
placed under nitrogen. After drop-wise addition of acrylonitrite
(1.51 mmol, 80 ul), the reaction mixture was stirred overnight un-
der nitrogen. The reaction mixture was quenched with distilled
water and then extracted with CH2Cl2, dried with MgSO4 and then
evaporation of CH2Cl2. The nitrile tail group protected thiol was
then used in the next step of the synthesis.
gle sample and across different samples. The matrix,
a-cyano-4-
hydroxycinnamic acid (CHCA) (Sigma–Aldrich, >99.0% purity),
was used without further purification and dissolved in 9/1 ratio
of the solvents CH2Cl2/EtOH (0.9 ml CH2Cl2 and 0.1 ml ethanol
for a total volume of 1 ml). The ratio of matrix (CHCA) to solvent
was 10 mg/ml. The matrix fragmentation can be observed in each
of the spectra.
2.3.2.3.3. Nitrile tail group thiol (3-((11-mercaptoundecyl)oxy)pro-
pane-nitrile). Nitrile tail group protected thiol (0.260 mmol,
127 mg), trifluroacetic acid (13.15 mmol, 1.5 ml), (1.37 mmol,
0.160 ml) triethylsilane, and 20 ml CH2Cl2 were added to
a
2.5. Cyclopropanation procedures
round-bottom flask. The reaction mixture was then stirred under
nitrogen overnight. Evaporation of CH2Cl2 and then column chro-
matography 50/50 hexane/CH2Cl2 to 100 CH2Cl2 produced a color-
less precipitate. (Yield 54%) 1H NMR (400 MHz, CDCl3 RT) d
3.65 ppm (t, 2H, J = 7, 6 Hz), 3.48 ppm (t, 2H, J = 9, 7 Hz),
2.60 ppm (t, 2H, J = 7 Hz), 2.53 ppm (q, 2H, J = 7 Hz) 1.65 ppm (m,
4H), 1.55 ppm (s, 1H), 1.28 ppm (m, 10H).
2.5.1. Homogeneous asymmetric cyclopropanation of styrene and
ethyl diazoacetate
The cyclopropanation reaction was performed according to the
literature [7] with the following changes.
Under nitrogen atmosphere, Cu(OTf)2(3.6 mg, 0.01 mmol) and
aza-bis(oxazoline) ligand a (6.2 mg, 0.022 mol) were dissolved in
anhydrous CH2Cl2 to produce a light green solution. Phenylhydr-
azine (22 ul of a 5% solution) was added and the green color
disappeared. Styrene (312 mg, 3 mmol, 345 ul) and then ethyl
diazoacetate (EDA) (1 mmol, 1 ml of an 8% solution in CH2Cl2 di-
luted with 7 ml CH2Cl2) were added over 4 h. The reaction mixture
was stirred for 5 h. The solvent was evaporated in vacuo to give
green oil. The reaction products were purified by p-TLC (purifica-
2.3.3. SAM preparation
Gold substrates were immersed in 2 mM ethanolic solution of
alkanethiols (10:90) (hydroxyl:background tail group) and incu-
bated overnight at room temperature (23–25 °C). Upon removal
from solution, the samples were carefully rinsed with CH2Cl2 and
dried under a stream of nitrogen (Scheme 1). The mixed monolayer