690
D. Plano et al.
Arch. Pharm. Chem. Life Sci. 2010, 10, 680–691
determination of the pattern of intra-molecular hydrogen bonds)
was performed on a SiliconGraphics Octane2 workstation pro-
vided with the software package InsightII. Three-dimensional
models of the compounds were constructed, in the vacuum
phase, using atoms and structural fragments from the Builder
module (InsightII). The protocol can be summed up as follows: (a)
Initial construction of the model. (b) Hierarchized systematic
conformational analysis: determination of the rotation-sensitive
bonds; selection of a 308 window to check each selected dihe-
dron. First filtration: Elimination of the conformations which
are indistinguishable by symmetry. Second filtration:
Elimination of conformations that present steric impediments.
Third filtration: Calculation of the energy of conformations and
elimination of those conformations whose relative energy
Evaluation of cell cycle progression and apoptosis
induction
For breast adenocarcinoma MCF-7 cells, the apoptotic status and
cell cycle analysis of the cells were determined using the Apo-
Direct kit (BD Pharmingen), based on the TUNEL technique,
under the conditions described by the manufacturer. In brief,
in the fixation step cells were suspended in 1% paraformalde-
hyde in PBS (pH 7.4) at a concentration of 1 ꢃ 106 cells/mL,
incubated on ice for 30 min, collected by centrifugation, washed,
adjusted to 1 ꢃ 106 cells/mL in 70% ice cold ethanol and incu-
bated at ꢀ208C for 1 h. After fixation, cells were recovered by
centrifugation, washed, resuspended in FITC dUTP-DNA labelling
solution and incubated for 2 h at 378C. Cells were then rinsed,
resuspended in PI/RNase staining buffer, incubated in the dark
for 30 min at RT and analyzed using a Coulter Epics XL flow
cytometer. The apoptotic status of leukemia CCRF-CEM cells was
evaluated by measuring the exposure of phosphatidylserine on
the cell membranes using the Annexin V-FITC Kit (BD
Pharmingen). In this test, 5 ꢃ 105 cells were pelleted and washed
in PBS. Cells were then stained with annexin V-FITC and propi-
dium iodide for 15 min at 48C in the dark and analyzed by flow
cytometry.
>10 kcal/mol at
a
global minimum. Fourth filtration:
Optimization of the geometry of the conformations and elimin-
ation of those whose relative energy >10 kcal/mol at a global
minimum. All of the molecular mechanics calculations were
carried out using the consistent valence force field ESFF43
(Search and Compare module, InsightII). (c) Analysis of confor-
mational trajectory (Analysis module, InsightII) and selection of
representative lowest energy conformation. Root mean square
(rms) deviations of the structures were monitored. (d) Mechano-
quantics optimization of the conformations obtained in the
previous step with the molecular orbital calculations package
Mopac (PM3 [44] semi-empirical approach, AMPAC/MOPAC built
into the InsightII module).
The authors wish to express their gratitude to the University of Navarra
Research Plan (Plan de Investigacio´n de la Universidad de Navarra, PIUNA)
and CAN Foundation for financial support for the project. We also thank
the Department of Industry of the Navarra Government for the award of
two grants (D.P. and E.M.).
Cytotoxic and antiproliferative activities
The cytotoxic effect of each substance was tested at five different
concentrations between 0.01 and 100 mM. Each substance was
initially dissolved in DMSO at a concentration of 0.1 M and serial
dilutions were prepared using culture medium. The plates with
cells from the different lines, to which medium containing the
substance under test was added, were incubated for 72 h at 378C
in a humidified atmosphere containing 5% CO2. Human tumor
cell lines were provided by the European Collection of Cell
Cultures (ECACC) or the American Type Culture Collection
(ATCC). Four cell lines were used: One human lymphocytic leu-
kemia (CCRF-CEM) and three human solid tumors, one colon
carcinoma (HT-29), one lung carcinoma (HTB-54), and one breast
adenocarcinoma (MCF-7). CCRF-CEM, HT-29 and HTB-54 cells were
grown in RPMI 1640 medium (Invitrogen) supplemented with
10% fetal calf serum, 2 mM L-glutamine, 100 units/mL penicillin,
100 mg/mL streptomycin and 10 mM HEPES buffer (pH ¼ 7.4).
MCF-7 cells were grown in EMEM medium (Clonetics) supplemented
with 10% fetal calf serum, 2 mM L-glutamine, 100 units/mL
penicillin and 100 mg/mL streptomycin. 184B5 cells were grown
in Hams F-12/DMEM (50:50) supplemented as described by Li et al.
[45]. BEAS-2B cells were grown in 25 mL fetal bovine serum (FBS),
5 mL insulin-transferrin-sodium selenite (ITS), 1 mL hydrocorti-
sone, 10 mL sodium pyruvate, 5 mL glutamine, 5 mL penicillin/
gentamicin, 10 mL epidermal growth factor (EGF), and 150 mL
retinoic acid (1 mM). Cytotoxicity was then determined by the
MTT method. Results are expressed as GI50, the concentration
that reduces by 50% the growth of treated cells with respect to
untreated controls, TGI, the concentration that completely
inhibits cell growth, and LC50, the concentration that kills
50% of the cells. Data were obtained from at least 3 independent
experiments performed in quadruplicate.
The authors have declared no conflict of interest.
References
[1] K. Gurusamy, Biol. Trace Elem. Res. 2007, 118, 191–206.
[2] E. Cheung, P. Wadhera, T. Dorff, J. Pinski, Expert Rev.
Anticancer Ther. 2008, 8, 43–50.
[3] M. G. Boosalis, Nutr. Clin. Pract. 2008, 23, 152–160.
[4] E. M. V. Araldi, I. Dell’Aica, I. Sogno, G. Lorusso, S. Garbisa, A.
Albini, Curr. Cancer Drug Targets 2008, 8, 146–155.
[5] G. Ravn-Haren, S. Bugel, B. N. Krath, T. Hoac, J. Stagsted, K.
Jorgensen, J. R. Bresson, E. H. Larsen, L. O. Dragsted, Br. J.
Nutr. 2008, 99, 883–892.
[6] E. S. J. Arner, A. Holmgren, Semin. Cancer Biol. 2006, 16, 420–
426.
[7] H. Zhao, J. D. Brooks, J. Urol. 2007, 177, 743–750.
[8] T. M. Cao, F. Y. Hua, C. M. Xu, B. S. Han, H. Dong, L. Zuo, X.
Wang, Y. Yang, H. Z. Pan, Z. N. Zhang, Ann. Hematol. 2006, 85,
434–442.
[9] H. Hu, C. Jiang, C. Ip, Y. M. Rustum, J. Lu¨, Clin. Cancer Res.
2005, 11, 2379–2388.
[10] Z. Wang, H. Hu, G. Li, H. J. Lee, C. Jiang, S. H. Kim, J. Lu¨, Int. J.
Cancer 2008, 122, 15–24.
[11] N. M. Corcoran, M. Najdovska, A. J. Costello, J. Urol. 2004, 171,
907–910.
[12] G. L. Sommen, A. Linden, H. Heimgartner, Helv. Chim. Acta
2007, 90, 641–651.
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