10.1002/cbic.201600538
ChemBioChem
FULL PAPER
having a significantly higher affinity for GC over DNP-Glc, the rate
constant of EGCrP-1 for cleavage of GC is considerably lower.
These rate constants are meagre in comparison to the kcat values
GC substrate has a longer carbon chain. However, this should be
approached with caution as iminosugars with long lipophilic
chains tend to be cytotoxic, possibly due to their surfactant-like
nature and ability to perturb membranes. Nonetheless, the
scaffold of inhibitor 17 has promise, and the lipophilic appendage
could be further optimised to enhance potency.[8]
of other β-glucosidases, such as Agrobacterium β-glucosidase[10]
,
which cleaves DNP-Glc with a kcat of 88 s-1. This is commensurate
with EGCrP-1’s role as a quality-control enzyme: a slow turnover
of GC is required to prevent the depletion of mature GC while still
allowing the hydrolysis of immature forms. On the other hand,
EGCrP-2 showed appreciable catalytic activity with both PNP-Glc
and DNP-Glc substrates, and hydrolysed DNP-Glc ten-fold faster
than did EGCrP-1, with a Km of 0.46±0.1 mM, kcat of 29±2 s-1, and
In an extension to this study, we sought to identify mechanism-
based covalent inhibitors of the enzymes, based upon a class of
previously identified potent inhibitors of human GCase10. In these
studies
a class of 2-deoxy-2-fluoroglucosides bearing a
k
cat/Km = (63±9)×103 M-1s-1.
phosphonoester leaving group was described. The fluorine at C2
destabilises the oxocarbenium ion-like transition states for
formation and hydrolysis of the covalent glycosyl-enzyme
intermediate, thus slowing both glycosylation and deglycosylation
of the enzyme, while the highly activated leaving group ensures
not only that the first glycosylation step is faster than
deglycosylation, but also that selectivity for this particular enzyme
can be optimized by mimicking, to some extent, the lipophilic
ceramide moiety. Inactivation studies were carried out with
EGCrP-2 and the most effective of these reagents so far,
compound 30 (Figure 2) proved to be effective in this case too,
with inactivation parameters of ki = 1.11 min-1; Ki = 11.8 µM; ki/Ki
= 94 mM-1min-1. In fact this inactivator reacted three times more
rapidly with EGCrP-2 than it did with human GCase (ki/Ki = 29
mM-1min-1)[11]. Interestingly, inactivation of EGCrP-1 was less
effective, and did not proceed to completion.
The library of β-glucosidase inhibitors was screened against
EGCrP-1 (Figure 1). The lipophilic iminosugars 10 and 17
provided > 80% inhibition at a concentration of 1 µM and were
selected for further analysis. The Ki values of inhibitors 10 and 17
were thereby determined to be 130 nM and 170 nM, respectively.
The screen against EGCrP-2 provided similar hits (Figure 1),
despite a number of compounds being omitted from the second
screen. The inhibition profile of EGCrP-2 closely mirrors that of
EGCrP-1, with inhibitors 16, 23 and 24 providing more than a 60%
reduction of the enzymatic rate and inhibitor 17 showing more
than 80% inhibition. Kinetic analysis of the best of these revealed
the Ki of inhibitor 17 to be 21 nM when tested against EGCrP-2,
eight times more potent than against EGCrP-1.
Figure 1.Percentage inhibition of EGCrP-1 and -2 at inhibitor concentrations of
1.0 µM.
Figure 2. Mechanism-based inactivation of EGCrP-2 by compound 30. EGCrP-
1 was not inactivated by this compound.
For both enzymes there was a clear trend in their inhibitor
sensitivity, with inhibitors becoming more effective with increasing
lipophilicity of the iminosugar substituent. One could likely
improve the potency of these inhibitors even further by extending
the length of the hydrocarbon chain substituent, since the native
Encouraged by these results, inhibitors 10, 16, 17, 20, 21, 22, 23,
24, and 30 were tested in vivo against C. neoformans. Cap59, a
mutant strain missing the outer fungal capsule, was used in
addition to the wild-type C. neoformans. A growth response assay
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